an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(4-hydroxyphenyl)acetate

1-piperideine 6-carboxylate

4-oxoglutaramate

(3E)-2-oxopent-3-enoate

2,6-dioxo-6-phenylhexa-3-enoate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

bisorganyltrisulfane

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

CO₂

carbamoyl phosphate

H₂O

prephenate

L-histidinol phosphate

imidazole acetol-phosphate

orotidine 5'-phosphate

oxaloacetate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

5-enolpyruvoyl-shikimate 3-phosphate

preuroporphyrinogen

porphobilinogen

coproporphyrinogen III

hydrogen peroxide

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

3-demethylubiquinol-6

3-deoxy-α-D-manno-2-octulosonate

aminoacetone

3-phosphooxypyruvate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-L,L-2,6-diaminopimelate

hydrogenobyrinate a,c-diamide

(R)-2,3-dihydroxy-3-methylpentanoate

adenosine 3',5'-bisphosphate

4-maleyl-acetoacetate

homogentisate

phosphoenolpyruvate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

nicotinate adenine dinucleotide

3-ureidopropanoate

β-nicotinate D-ribonucleotide

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

6-phospho D-glucono-1,5-lactone

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-gluconate 6-phosphate

histidinol

histidinal

5-methylcytosine

L-canavanine

acetoacetate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

ethylamine

N-isopropylammelide

hydroxyatrazine

S-methyl-5-thio-α-D-ribose 1-phosphate

S-methyl-5'-thioadenosine

5-deoxy-α-ribose 1-phosphate

5-phospho-β-D-ribosylamine

(S)-dihydroorotate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

xanthine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

glycerone phosphate

3-dehydroshikimate

3-dehydroquinate

γ-L-glutamyl 5-phosphate

5-aminolevulinate

citrate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

2-C-methyl-D-erythritol 4-phosphate

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

3'-phosphoadenylyl-sulfate

2-dehydropantoate

D-erythro-imidazole-glycerol-phosphate

5-amino-6-(D-ribitylamino)uracil

N-(5-phosphoribosyl)-anthranilate

3-deoxy-D-manno-octulosonate 8-phosphate

acetyl phosphate

norspermidine

carboxynorspermidine

(S)-2-amino-6-oxohexanoate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

isopentenyl diphosphate

(L-threonylcarbamoyl)adenylate

DNA without lesion

carbon monoxide

H₂

4-fumaryl-acetoacetate

4-hydroxy-2-nonenal

4-acetamidobutanoate

4-acetamidobutanal

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

vanillin

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

1-deoxy-L-glycero-tetrulose 4-phosphate

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

lipid IV_A

lipid A disaccharide (E. coli)

γ-butyrobetaine

carbonic acid

S-formylglutathione

ethanolamine

3-mercaptopyruvate

succinate semialdehyde

glycolate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

urea-1-carboxylate

5-oxo-L-proline

3-oxopropanoate

4-aminobutanoate

γ-glutamyl-isopropylamide

isopropylamine

quinolinate

shikimate

oxalosuccinate

ectoine

(2S)-4-acetamido-2-aminobutanoate

(5R)-5-benzyl-hydantoin

(5S)-5-benzyl-hydantoin

pyrazine-2-carboxylate

hydrogenobyrinate

tartronate semialdehyde

hydroxypyruvate

4,5-cis-dihydroxy-1,2-dithiacyclohexane

dithioerythritol

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

hypotaurine

selenophosphate

(R)-1-amino-2-propanol O-2-phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

prenyl diphosphate

4-amino-4-deoxychorismate

cis,cis-muconate

(+)-muconolactone

muconolactone

(R)-mandelate

(S)-mandelate

4'-phosphopantetheine

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

O-acetyl-L-serine

hydrogen selenide

tryptamine

2-dehydro-3-deoxy-D-galactonate

dimethylamine

arsenite

benzoylsuccinyl-CoA

itaconate

6-aminohexanoate

6-aminohexanoate linear dimer

5-phospho-α-D-ribose 1,2-cyclic phosphate

α-D-ribose-1-methylphosphonate 5-phosphate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

2-phosphoglycolate

α-D-glucosamine 1-phosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

glutathione disulfide

butyramide

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

dihydroxyacetone

(4S)-4-hydroxy-2-oxoheptanedioate

β-D-ribosylnicotinate

FK-506

31-O-desmethylFK-506

anthranilate

N-ethylammeline

deethylsimazine

methylsalicylate

salicyl alcohol

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

urea

3-deoxy-D-arabino-heptulosonate 7-phosphate

(S)-ureidoglycolate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

α-ribazole 5'-phosphate

α-ribazole

5,6-dimethylbenzimidazole

(2-hydroxyphenyl)acetate

iminodiacetate

nitrilotriacetate

hydroxylamine

ammonia

methylamine

2-iminoacetate

N-ethylglycine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

2-dehydro-3-deoxy-D-galactonate 6-phosphate

N-Formyl-L-kynurenine

3-hydroxyanthranilate

lipid X

shikimate 3-phosphate

4-imidazolone-5-propanoate

urocanate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

dimethylsulfoniopropanoate

D-glucurono-6,3-lactone

propynoate

prop-2-ynal

3,4-dihydroxyphenylacetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetate

5-hydroxyindole acetaldehyde

4-imidazoleacetate

imidazole acetaldehyde

α-D-galactosyl-diphosphoundecaprenol

2-dehydro-3-deoxy-D-gluconate

(2S,3S)-2,3-dihydroxy-5-oxohexanedioate

5-dehydro-4-deoxy-D-glucarate

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

3-methylmuconolactone

N-methylhydantoin

pinocembrin chalcone

phloretin

creatinine

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

dialurate

formamide

2-amino-3-carboxymuconate-6-semialdehyde

4-amino-2-methyl-5-pyrimidinemethanol

isobutanol

pyruvic oxime

autoinducer 2

S-ribosyl-L-homocysteine

N-ethylammelide

adipate

6-oxohexanoate

6-aminohexanoate cyclic dimer

2-oxopent-4-enoate

(2E)-2-hydroxypenta-2,4-dienoate

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

1,4-dihydroxy-2-naphthoate

(S)-4-amino-5-oxopentanoate

N-(γ-L-glutamyl)-L-alaninol

L-alaninol

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

mercuriphenyl acetate

glutathioselenol

selenodiglutathione

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

α-D-galacturonate 1-phosphate

L-gulono-1,4-lactone

L-xylo-hex-3-ulono-1,4-lactone

L-dehydro-ascorbate

(2E,6E)-farnesol

(2E,6E)-farnesyl diphosphate

pristanate

trimethyl sulfonium

tungstate

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

superoxide

phosphonate

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

H⁺

ammonium

Hg²⁺

Co²⁺

Fe²⁺

Mn²⁺

Ni²⁺

Zn²⁺

S-(hydroxymethyl)glutathione

dimethyl sulfide

3-dimethylsulfoniopropionaldehyde

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

2-sulfinoacetaldehyde

sulfoacetaldehyde

taurine

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

methanethiol

S-sulfanylglutathione

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

hydroxyl radical

monodehydroascorbate radical

nitric oxide

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

5,10-methenyltetrahydrofolate mono-L-glutamate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

1-oleoyl-2-lyso-glycerone phosphate

(S)-ureidoglycine

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

(R)-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

2-chloroacetate

S⁰

oxygen

hydrogen sulfide

Hg⁰

protoporphyrinogen IX

protoporphyrin IX

uroporphyrinogen-III

coproporphyrinogen I

uroporphyrinogen-I

siroheme

protoheme

hydrogen cyanide

cob(I)alamin

adenosylcobalamin

cob(II)yrinate a,c-diamide

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

cobyrinate

cob(II)yrinate c-monoamide

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

adenosylcobyrate

adenosyl-cobinamide phosphate

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-sirohydrochlorin

cobalt-precorrin-3

cobalt-factor III

ethylphosphate

phenylacetate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

L-homocysteine

4-methylphenol

2-iminosuccinate

2-iminobutanoate

2-iminopropanoate

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

hypoglycin B

L-α-amino-ε-keto-pimelate

L-kynurenine

L-lysine

L-histidine

L-arginine

N^ω-hydroxy-L-arginine

L-glutamate

D-glutamate

L-glutamine

L-proline

L-leucine

glycine

L-serine

L-alanine

N-carbamoylsarcosine

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

L-threo-3-phenylserine

L-phenylalanine

L-isoleucine

L-valine

L-tryptophan

L-selenocysteine

L-methionine

L-cysteine

L-isoglutamine

L-aspartate

L-aspartyl-4-phosphate

L-threonine

L-ornithine

L,L-diaminopimelate

L-asparagine

L-2,4-diaminobutanoate

L-cystathionine

L-tyrosine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-aspartate

N-formimino-L-glutamate

N⁶,N⁶-dimethyl-L-arginine

L-citrulline

L-4-hydroxyglutamate semialdehyde

L-aspartate 4-semialdehyde

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

O-phospho-L-homoserine

O-succinyl-L-homoserine

L-homoserine

hypoglycin A

S-sulfo-L-cysteine

L-dopa

L-glutamate-5-semialdehyde

L-canaline

L-allo-threonine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-2-amino-3-oxobutanoate

L-saccharopine

L-threonine 3-O-phosphate

3-phospho-L-serine

O-acetyl-L-homoserine

5-hydroxy-L-tryptophan

3-hydroxy-L-kynurenine

N-carbamoylglycine

N-acetyl-L-glutamate

sarcosine

D-methionine

D-cysteine

D-alanine

D-aspartate

D-proline

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

isoguanine

8-oxo-dGTP

8-oxo-GTP

ADP

ATP

GDP

GTP

IMP

AMP

1-(5-phospho-β-D-ribosyl)-ATP

adenylo-succinate

5'-deoxyadenosine

XMP

dADP

dGDP

dAMP

dATP

dGMP

dGTP

ITP

GMP

guanosine 3'-monophosphate

adenosine 3'-monophosphate

1-(5-phospho-β-D-ribosyl)-AMP

hypoxanthine

ppGpp

cyclic-AMP

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

2'-deoxyinosine

2'-deoxyguanosine

2'-deoxyadenosine

dITP

dIDP

IDP

cyclic-GMP

pppGpp

5-fluorouracil

GDP-α-D-mannose

GDP-α-D-glucose

5'-deoxy-5'-fluoroadenosine

5-fluorocytosine

NADP⁺

NAD⁺

NADPH

NADH

5,6-dihydrouracil

5,6-dihydrothymine

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-glucose

UDP-α-D-galactose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-α-D-glucuronate

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

preQ₁

adenine

guanine

uracil

thymine

cytosine

uridine 3'-monophosphate

cytidine-3'-monophosphate

cyclic di-3',5'-guanylate

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

dUMP

dTMP

dCMP

dCDP

dUDP

dTDP

dUTP

dCTP

dTTP

UDP

CDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

2-hydroxy-dATP

5-hydroxy-CMP

5-hydroxy-CTP

2'-deoxyuridine

thymidine

2'-deoxycytidine

adenosine

xanthosine

guanosine

inosine

cytidine

uridine

D-galactonate

D-altronate

D-gluconate

aldehydo-L-galactonate

L-gulonate

1-(β-D ribofuranosyl)nicotinamide

α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

sucrose

α,α-trehalose

aldehydo-D-galacturonate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

D-galactosylononitol

galactinol

glycerol

galactitol

D-mannitol

β-D-fructofuranose

keto-D-fructose

D-glyceraldehyde

L-glyceraldehyde

glycolaldehyde

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

salicylaldehyde

vanillylamine

miraxanthin V

betalamate

geranyl diphosphate

apo-4'-lycopenal

apo-4'-lycopenoate

all-trans-retinol

all-trans-retinyl palmitate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-nonaprenyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-sn-glycerol 3-phosphate

1-octanol

ethanol

phytol

butan-1-ol

methanol

myo-inositol

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

D-ononitol

protocatechuate

biphenyl-2,3-diol

dopamine

3,4-dihydroxyphenylacetate

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycolaldehyde

catechol

(2E,6E)-farnesal

fluoroacetaldehyde

L-2-aminopropionaldehyde

methylglyoxal

benzaldehyde

phytenal

(S)-lactaldehyde

(R)-lactaldehyde

acetaldehyde

1-octanal

formaldehyde

isobutanal

butan-1-al

1-propanal

diacetyl

isoliquiritigenin

2',4,4',6'-tetrahydroxychalcone

menadione

caldariellaquinone

a coenzyme-A group

octanoate

palmitate

decanoate

butanoate

stearate

linoleate

oleate

γ-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

(3E,5Z)-tetradecadienoate

α-linolenate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

(2E,6E)-farnesoate

leukotriene-D4

leukotriene-E4

3-oxoadipate

acetate

pyruvate

formate

propanoate

(R)-lactate

(S)-lactate

(R)-3-hydroxybutanoate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

chorismate

D-glucarate

succinate

fumarate

(S)-malate

(4S)-4-hydroxy-2-oxoglutarate

2-oxoglutarate

2-oxobutanoate

glyoxylate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

vanillate

salicylate

4-aminobenzoate

benzoate

orotate

(R)-pantoate

allantoate

L-carnitine

fluoroacetate

D-tagaturonate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

4-hydroxybenzoate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

(2E,4E)-6-(2-aminophenyl)-2-hydroxy-6-oxohexa-2,4-dienoate

2'-aminobiphenyl-2,3-diol

urate

cyanuric acid

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

benzene

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-9

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

demethylmenaquinol-7

demethylmenaquinol-6

demethylmenaquinol-8

menaquinol-7

menaquinol-6

menaquinol-8

ubiquinol-9

ubiquinol-8

ubiquinol-6

ubiquinol-7

ubiquinol-10

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

vanillyl mandelate

6-isobutyl-4-hydroxy-2-pyrone

atrazine

2-phenylethylamine

serotonin

propionitrile

acrylonitrile

(indole-3-yl)acetonitrile

3-cyanopyridine

preQ₀

n-butyronitrile

7,8-dihydrolumazine

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin 3'-phosphate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

riboflavin

FAD

FMN

FADH₂

FMNH₂

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

9H carbazole

hydantoin

sirohydrochlorin

precorrin-2

precorrin-1

precorrin-3B

precorrin-3A

precorrin-8x

precorrin-4

precorrin-6A

precorrin-6B

precorrin-7

precorrin-5

nicotinate

nicotinamide

thiamine

L-ascorbate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine

pyridoxal

pyridoxamine

coenzyme A

(R)-NADHX

(S)-NADHX

glycine betaine

malonyl-CoA

acetyl-CoA

2-methylacetoacetyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

succinyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

phenylacetyl-CoA

(2E,5Z)-tetradecenoyl-CoA

L-carnitinyl-CoA

γ-butyrobetainyl-CoA

3'-dephospho-CoA

4-hydroxybenzoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

isobutanoyl-CoA

dihomo γ-linolenoyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

crotonobetainyl-CoA

itaconyl-CoA

(3S)-citryl-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

(E)-glutaconyl-CoA

benzoyl-CoA

isovaleryl-CoA

dihydro-4-coumaroyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-palmitoyl-CoA

3-oxooctadecanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

hexanoyl-CoA

decanoyl-CoA

lauroyl-CoA

octanoyl-CoA

propanoyl-CoA

butanoyl-CoA

cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

2-carboxy-cerotoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(E)-cinnamoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

L-galactono-1,4-lactone

D-glucono-1,5-lactone

(+)-7-epi-jasmonate

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

methane

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

pyrazinamide

(S)-(+)-allantoin

6-caprolactam

acetamide

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphocholine

choline

betaine aldehyde

betaine aldehyde hydrate

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

agmatine

spermidine

putrescine

cadaverine

N-acetylputrescine