an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

2-dehydropantoate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

4-methylmuconolactone

2-chloro-4-methyl-cis,cis-muconate

urea-1-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

3-hydroxypropanal

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

3-phosphooxypyruvate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

urea

oxalosuccinate

citrate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

(2R,4S)-2, 4-diaminopentanoate

1,3-propanediol

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

(4-hydroxyphenyl)acetate

cis-coumarinic acid-β-D-glucoside

scopolin

4-hydroxybenzaldehyde

4-methylumbelliferyl glucoside

5-methylcytosine

N⁵-carboxyaminoimidazole ribonucleotide

(2R)-2-amino-4-oxopentanoate

5-ureidoimidazole-4-carboxylate

5-aminoimidazole-4-carboxylate

4-aminoimidazole

3,5-dihydro-4H-imidazol-4-one

2-amino-3-carboxymuconate-6-semialdehyde

2-(α-hydroxyethyl)thiamine diphosphate

6-phospho D-glucono-1,5-lactone

gallate

1,2,3,5-tetrahydroxybenzene

pyrogallol

phloroglucinol

dihydrophloroglucinol

3-hydroxy-5-oxohexanoate

3-hydroxy-5- oxohexanoyl-CoA

cyclohex-1,5-diene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

3-hydroxypimeloyl-CoA

3-oxopimeloyl-CoA

cyclohexane-1-carboxylate

cyclohexane-1-carbonyl-CoA

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(R)-4'-phosphopantothenoyl-L-cysteine

(3S,5S)-3,5-diaminohexanoate

(S)-5-amino-3-oxohexanoate

2-iminoacetate

4-amino-2-methyl-5-pyrimidinemethanol

(R)-1-amino-2-propanol O-2-phosphate

D-gluconate 6-phosphate

dialurate

N-succinyl-L,L-2,6-diaminopimelate

adenosine 5'-phosphosulfate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-dehydro-4-deoxy-D-glucarate

hydroxypyruvate

pseudouridine

L-gulono-1,4-lactone

L-xylo-hex-3-ulono-1,4-lactone

α-D-galacturonate 1-phosphate

L-dehydro-ascorbate

glutathione disulfide

H₂O

2-O-(6-phospho-α-D-mannosyl)-D-glycerate

2-amino-2-deoxy-D-gluconate 6-phosphate

glycerone phosphate

dihydroxyacetone

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-muramate 6-phosphate

O-D-alanyl-poly(ribitol phosphate)

poly(ribitol phosphate)

acetyl phosphate

S-adenosyl 3-(methylsulfanyl)propylamine

CO₂

hydrogen peroxide

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(S)-dihydroorotate

O-acetyl-L-serine

hydrogen selenide

selenophosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

phosphonoacetate

chloramphenicol

autoinducer 2

S-ribosyl-L-homocysteine

orotidine 5'-phosphate

carbamoyl phosphate

pseudouridine 5'-phosphate

(R)-4'-phosphopantothenate

(R)-pantothenate

4-guanidinobutyramide

α-D-glucosamine 1-phosphate

α-ribazole 5'-phosphate

β-nicotinate D-ribonucleotide

5,6-dimethylbenzimidazole

α-ribazole

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

preuroporphyrinogen

porphobilinogen

5-aminolevulinate

DNA without lesion

ethanolamine

phosphoenolpyruvate

H₂

dihydrolipoate

5-aminopentanoate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

3-ureidopropanoate

salicyl alcohol

crotonate

4-amino-4-deoxychorismate

1,6-anhydro-N-acetyl-β-muramate

L-selenocystathionine

2-phenylethanol

2-methylbutanal

2-methylbutanol

3-methylbutanal

3-methylbutanol

isobutanol

indole-3-glycol aldehyde

indole-3-glycol

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

(S)-2,3-dihydrodipicolinate

2-dehydro-3-deoxy-D-gluconate

oxaloacetate

tartronate semialdehyde

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

coproporphyrinogen III

3-dehydroshikimate

shikimate

acetoacetate

5-deoxy-α-ribose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

S-methyl-5'-thioadenosine

5-(methylsulfanyl)-α-D-ribose

thiamine diphosphate

4'-phosphopantetheine

β-D-ribosylnicotinate

nicotinate adenine dinucleotide

L-histidinol phosphate

imidazole acetol-phosphate

L-canavanine

canavaninosuccinate

L-arginino-succinate

ammonia

butanoyl phosphate

quinolinate

succinate semialdehyde

xanthine

L-β-lysine

pyruvic oxime

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

3-dehydroquinate

carbonic acid

4-acetamidobutanoate

4-acetamidobutanal

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

carbon monoxide

hydroxylamine

3-oxopropanoate

4-aminobutanoate

2-C-methyl-D-erythritol 4-phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

N²-succinyl-L-ornithine

O-ureido-L-homoserine

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

prenyl diphosphate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

prephenate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

isopentenyl diphosphate

aminoacetone

arsenite

5-amino-6-(D-ribitylamino)uracil

(lipoyl)adenylate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

histidinol

histidinal

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

D-erythro-imidazole-glycerol-phosphate

3-mercaptopyruvate

(2E,6E)-farnesyl diphosphate

L-α-amino-ε-keto-pimelate

L-methionine

L-cysteine

glycine

L-alanine

L-selenocysteine

L-proline

L-valine

L-phenylalanine

L-isoleucine

L-leucine

L-tyrosine

L-aspartate

L-glutamate

L-glutamine

L-lysine

L-arginine

L-asparagine

L-aspartyl-4-phosphate

L-threonine

L-serine

L-cystathionine

L-histidine

L,L-diaminopimelate

L-ornithine

N-carbamoyl-L-aspartate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

L-citrulline

L-glutamate-5-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-aspartate 4-semialdehyde

L-homocysteine

O-phospho-L-homoserine

L-homoserine

L-canaline

O-succinyl-L-homoserine

S-sulfo-L-cysteine

D-ornithine

L-allo-threonine

meso-diaminopimelate

seleno-L-homocysteine

L-2-amino-3-oxobutanoate

O-acetyl-L-homoserine

N-formimino-glycine

N-carbamoylglycine

N-acetyl-L-glutamate

S-methyl-L-methionine

3-phospho-L-serine

D-aspartate

D-alanine

D-glutamate

D-proline

D-serine

β-alanine

(R)-3-amino-2-methylpropanoate

L-threo-3-phenylserine

dAMP

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

2'-deoxyguanosine

1-(5-phospho-β-D-ribosyl)-AMP

ADP

ATP

AMP

GDP

adenylo-succinate

IMP

GTP

GMP

dGDP

dGTP

dADP

dATP

hypoxanthine

XMP

5'-deoxyadenosine

ppGpp

pppGpp

2'-deoxyinosine

2'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-ATP

5,6-dihydrothymine

5,6-dihydrouracil

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-α-D-mannose

GDP-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-glucuronate

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

purine

guanine

adenine

thymine

cytosine

uracil

preQ₁

dTMP

dUMP

dCMP

dTDP

dUDP

dCDP

dTTP

dUTP

dCTP

UDP

CDP

reduced β-nicotinamide D-ribonucleotide

β-nicotinamide D-ribonucleotide

UTP

CTP

CMP

UMP

two adjacent thymidines in DNA

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

NADP⁺

NAD⁺

NADPH

NADH

thymidine

2'-deoxyuridine

2'-deoxycytidine

guanosine

inosine

xanthosine

adenosine

uridine

cytidine

5-fluorouracil

5'-deoxy-5'-fluoroadenosine

5-fluorocytosine

D-gluconate

L-gulonate

aldehydo-L-galactonate

D-mannonate

D-altronate

1-(β-D ribofuranosyl)nicotinamide

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

lotaustralin

linamarin

neolinustatin

linustatin

taxiphyllin

methyl β-D-glucoside 6-phosphate

salicin 6-phosphate

arbutin-6-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

α-D-galactose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

D-fructose 6-phosphate

D-tagatofuranose 6-phosphate

D-tagatofuranose 1,6-bisphosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

keto-L-tagatose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^G-phosphate

N,N'-diacetylchitobiose 6'-phosphate

N-monoacetylchitobiose 6'-phosphate

sucrose 6^F-phosphate

β-D-cellobiose 6'-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

β-D-fructofuranose

keto-D-fructose

glycolaldehyde

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

β-D-galactopyranose

α-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-mannosamine

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-β-neuraminate

glycerol

D-mannitol 1-phosphate

galactitol 1-phosphate

D-sorbitol 6-phosphate

β-D-cellobiose

maltotriose

sucrose

maltohexaose

maltoheptaose

maltopentaose

maltotetraose

aldehydo-D-galacturonate

salicylaldehyde

4-methylumbelliferone

scopoletin

coumarin

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

apo-4'-lycopenal

apo-4'-lycopenoate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

dioleoyl phosphatidate

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

hydroquinone

4,6-dichloro-3-methylcatechol

2,3-dihydroxybenzoate

protocatechuate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

butan-1-ol

phytol

propan-1-ol

ethanol

methanol

fluoroacetaldehyde

methylglyoxal

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

phytenal

(S)-lactaldehyde

butan-1-al

isobutanal

1-propanal

acetaldehyde

formaldehyde

1-octanal

diacetyl

pyruvate

2-oxobutanoate

2-oxoglutarate

5-chloro-4-hydroxy-2-oxopentanoate

glyoxylate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

4-aminobenzoate

benzoate

acetate

(R)-pantoate

fluoroacetate

orotate

5-chloro-5-deoxy-D-ribonate

D-tagaturonate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

palmitate

stearate

butanoate

octanoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

phytenate

formate

propanoate

(R)-lactate

(S)-lactate

4-hydroxybutanoate

(R)-glycerate

(R)-3-hydroxybutanoate

cis-aconitate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

3-methyl-cis,cis-muconate

chorismate

D-galactarate

D-glucarate

succinate

fumarate

(S)-malate

6,8-dihydroxypurine

4-tyrosol

urate

coumarinate

(1R,2S)-4,6-dichloro-3-methylcyclohexa-3,5-diene-1,2-diol

2,4-dichlorotoluene

4-methylphenol

3-methoxy-4-hydroxyphenylglycol

preQ₀

(indole-3-yl)acetonitrile

hydrogen cyanide

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

7,8-dihydrolumazine

5-methyl-tetrahydrosarcinapterin

tetrahydrosarcinapterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin 3'-phosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

7,8-dihydropterin

guanylyl molybdenum cofactor

thio-molybdenum cofactor

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

FAD

riboflavin

FMN

FADH₂

reduced riboflavin

FMNH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

dipicolinate

hydantoin

adenosylcobalamin

cobyrinate

sirohydrochlorin

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

cobalt-precorrin-6A

cobalt-precorrin-5B

precorrin-5

precorrin-4

cobalt-precorrin-6B

cobalt-precorrin-2

precorrin-2

precorrin-1

L-ascorbate

nicotinate

nicotinamide

thiamine

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxal 5'-phosphate

pyridoxal

pyridoxine 5'-phosphate

pyridoxine

coenzyme A

(R)-lipoate

(R)-NADHX

(S)-NADHX

D-glucono-1,5-lactone

2-chloro-5-methyl-dienelactone

3,5-dichloro-2-methyl-muconolactone

5-chloro-3-methyl-cis-dienelactone

cis-dienelactone

3-chloro-2-methyl-dienelactone

L-galactono-1,4-lactone

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

isobutanoyl-CoA

(E)-glutaconyl-CoA

glutaryl-CoA

(S)-3-aminobutanoyl-CoA

acetyl-CoA

succinyl-CoA

4-hydroxybenzoyl-CoA

2-methylacetoacetyl-CoA

3'-dephospho-CoA

CoA-disulfide

4-hydroxybutanoyl-CoA

(+)-7-epi-jasmonoyl-CoA

dihomo γ-linolenoyl-CoA

malonyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

hexadecanedioyl-CoA

palmitoyl-CoA

stearoyl-CoA

butanoyl-CoA

propanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-malyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

(indol-3-yl)acetate

(+)-7-epi-jasmonate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

bromochloromethane

3-chloro-cis,cis-muconate

3,5-dichloro-2-methyl-muconate

3-chloro-2-methyl-maleylacetate

2-chloro-5-methyl-maleylacetate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

agmatine

spermine

putrescine

spermidine

N¹-acetylspermine

N-acetylputrescine

N¹-acetylspermidine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

trimethyl sulfonium

sulfate

sulfite

selenide

thiosulfate

nitrite

hydrogensulfite

hydrogencarbonate

superoxide

phosphate

triphosphate

diphosphate

chloride

bromide

Ca²⁺

Fe²⁺

Co²⁺

Na⁺

H⁺

ammonium

S-(hydroxymethyl)glutathione

dimethyl sulfide

3-(methylsulfanyl)propanal

methionol

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

methanethiol

S-sulfanylglutathione

chloramphenicol 3-acetate

nitric oxide

monodehydroascorbate radical

5,10-methenyltetrahydrofolate mono-L-glutamate

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

oxygen

hydrogen sulfide

protoporphyrin IX

uroporphyrinogen-III

protoporphyrinogen IX

uroporphyrinogen-I

siroheme

protoheme

N₂

cobalt-factor III

cob(I)yrinate a,c-diamide

adenosyl-cobinamide phosphate

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

cobalt-sirohydrochlorin

DNA with lesion

2-iminobutanoate

2-iminosuccinate

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

(R)-2-hydroxy-4-methylpentanoate

4-methylpentanoyl-CoA

(R)-2-hydroxy-4-methylpentanoyl-CoA

4-methylpentanoate