an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

L-dehydro-ascorbate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

bisorganyltrisulfane

5,6-dihydroxyindole

1-pyrroline

4-oxoglutaramate

1-piperideine-2-carboxylate

1-piperideine 6-carboxylate

5-aminopentanoate

α-D-galacturonate 1-phosphate

L-dopachrome

selenodiglutathione

glutathioselenol

isopropylamine

N-carbamoyl-2-oxoglycine

oxamate

(R)-4'-phosphopantothenoyl-L-cysteine

formamide

2-amino-3-carboxymuconate-6-semialdehyde

S-ribosyl-L-homocysteine

autoinducer 2

7-epicholate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

L-arabinono-1,4-lactone

2-dehydro-3-deoxy-L-arabinonate

L-arabinonate

3-ureidopropanoate

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-(3-hydroxyphenyl)propanoate

(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

L-xylo-hex-3-ulono-1,4-lactone

2-dehydro-6-phospho-D-gluconate

dialurate

core oligosaccharide-lipid A (E. coli K-12 core type)

ADP-L-glycero-β-D-manno-heptose

pimeloyl-CoA

6-hydroxy-3-succinoyl-pyridine

2,5-dihydroxypyridine

(lipoyl)adenylate

N-acetyl-D-muramate 6-phosphate

6-amino-2-oxohexanoate

acetyl phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

histidinal

(S)-2,3-dihydrodipicolinate

(S)-2,3,4,5-tetrahydrodipicolinate

5,6-dimethylbenzimidazole

α-ribazole

α-ribazole 5'-phosphate

ammonia

2-phosphoglycolate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5'-thioadenosine

lipid A disaccharide (E. coli)

propanoyl phosphate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

1,6-anhydro-N-acetyl-β-muramate

2-pyrone-4,6-dicarboxylate

L-gulono-1,4-lactone

S-adenosyl 3-(methylsulfanyl)propylamine

histidinol

(E)-3-(methoxycarbonyl)pent-2-enedioate

creatinine

2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate

(2R,3S)-2,3-dihydroxy-2,3-dihydro-p-cumate

2,3-dihydroxy-p-cumate

(1R,2S)-cyclohexa-3,5-diene-1,2-diol

3-phenylpropanoate

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

3-(2,3-dihydroxyphenyl)propanoate

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

(2E)-2-hydroxypenta-2,4-dienoate

(3E)-2-oxopent-3-enoate

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

N,N-dimethyl-1,4-phenylenediamine

benzoylsuccinyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

N-ethylmaleimide

N-ethylsuccinimide

2-dehydro-3-deoxy-D-gluconate

(2-hydroxyphenyl)acetate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

malonate

carboxynorspermidine

norspermidine

(S)-2-amino-6-oxohexanoate

dethiobiotin

5-amino-6-(D-ribitylamino)uracil

lipid X

L-quinate

isoquinoline

isoquinolin-2(1H)-one

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol

indole-3-glycol aldehyde

isobutanol

3-methylbutanol

3-methylbutanal

2-methylbutanol

2-methylbutanal

2-phenylethanol

3-methylmuconolactone

muconolactone

(+)-muconolactone

cis,cis-muconate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3α,7α-dihydroxy-24-oxo-5β-cholestanoyl CoA

3-oxo-3-phenylpropanoyl-CoA

2-protocatechuoylphloroglucinolcarboxylate

glutathione disulfide

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

D-phenylhydantoin

N-carbamoyl-D-phenylglycine

DNA without lesion

5-oxo-L-proline

(S)-5-hydroxyisourate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-ureidoglycolate

hydrogenobyrinate a,c-diamide

4-methyl-2-oxopentanoate

α-D-ribose 1,5-bisphosphate

urea-1-carboxylate

5-carboxymethyl-2-hydroxymuconate

L-selenocystathionine

7-carboxy-7-deazaguanine

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(5S)-5-benzyl-hydantoin

(5R)-5-benzyl-hydantoin

(4,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate-enol-lactone

4-methyl-3-oxoadipate

nigerose

palmitaldehyde

(2E)-hexadecenal

salicyl alcohol

methylsalicylate

4-fumaryl-acetoacetate

2-maleylacetate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

H₂

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

hydrogenobyrinate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

carbon monoxide

lipid IV_A

ADP-D-glycero-β-D-manno-heptose

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

3-dehydroquinate

2-iminoacetate

3-mercaptopyruvate

coniferaldehyde

4'-phosphopantetheine

4-amino-4-deoxychorismate

2-oleoylglycerol

3-phosphooxypyruvate

isochorismate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

4-acetamidobutanal

4-acetamidobutanoate

4-(γ-L-glutamylamino)butanal

4-(γ-L-glutamylamino)butanoate

(R)-4-phosphopantoate

N⁵-carboxyaminoimidazole ribonucleotide

6-phospho D-glucono-1,5-lactone

ethanolamine

D-glycero-β-D-manno-heptose 1,7-bisphosphate

D-glycero-β-D-manno-heptose 1-phosphate

β-D-ribosylnicotinate

carbonic acid

hydrogen selenide

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

nicotinate adenine dinucleotide

porphobilinogen

serotonin O-sulfate

5-hydroxytryptophol

5-hydroxytryptophol sulfate

6-hydroxymelatonin

6-sulfatoxymelatonin

N-acetyl-serotonin sulfate

adenosine 3',5'-bisphosphate

dopamine 3-O-sulfate

O-acetyl-L-serine

methylamine

4-hydroxy-2-nonenal

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

anthranilate

(R)-4'-phosphopantothenate

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

β-nicotinate D-ribonucleotide

quinolinate

selenophosphate

L-histidinol phosphate

D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

isopentenyl diphosphate

3-deoxy-D-manno-octulosonate 8-phosphate

2-C-methyl-D-erythritol 4-phosphate

S-formylglutathione

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

(R)-1-amino-2-propanol O-2-phosphate

prephenate

5-enolpyruvoyl-shikimate 3-phosphate

3-deoxy-α-D-manno-2-octulosonate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

N-(5-phosphoribosyl)-anthranilate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

2-keto-D-gluconate

2,5-didehydro-D-gluconate

L-tartrate

hydroxyatrazine

N-isopropylammelide

ethylamine

urea

3-deoxy-D-arabino-heptulosonate 7-phosphate

5-methylcytosine

glycolate

hydroxypyruvate

propionamide

(indol-3-yl)acetamide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

acetoacetate

enol-phenylpyruvate

2,5-dioxopentanoate

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

1-deoxy-L-glycero-tetrulose 4-phosphate

oxalosuccinate

citrate

tartronate semialdehyde

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

N-acetyl-L-glutamate 5-semialdehyde

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

O-ureido-L-homoserine

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

2-dehydropantoate

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

homogentisate

4-maleyl-acetoacetate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

(R)-pantothenate

5-dehydro-4-deoxy-D-glucarate

γ-L-glutamyl 5-phosphate

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

prenyl diphosphate

glycerone phosphate

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

carbamoyl phosphate

(S)-dihydroorotate

4-imidazolone-5-propanoate

urocanate

shikimate 3-phosphate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

xanthine

N-acetylglutamyl-phosphate

orotidine 5'-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

α-D-glucosamine 1-phosphate

coproporphyrinogen III

shikimate

3-dehydroshikimate

hydrogen peroxide

canavaninosuccinate

L-canavanine

L-arginino-succinate

preuroporphyrinogen

3-oxopropanoate

4-aminobutanoate

succinate semialdehyde

2-aminoacetaldehyde

oxaloacetate

CO₂

phosphoenolpyruvate

N-carbamoylputrescine

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

H₂O

(2E,6E)-farnesyl diphosphate

pristanate

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

S-(hydroxymethyl)glutathione

dimethyl sulfide

S-methyl-L-methionine

methionol

3-(methylsulfanyl)propanal

glutathione

thiocyanate

methanethiol

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

L-cysteate

3-sulfopyruvate

taurine

3-(N-morpholino)propanesulfonate

isethionate

1-butanesulfonate

(R)-S-lactoylglutathione

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

superoxide

chloride

phosphate

triphosphate

diphosphate

Fe³⁺

Mg²⁺

Fe²⁺

Co²⁺

ammonium

H⁺

K⁺

glycine betaine

betaine aldehyde

choline

choline sulfate

betaine aldehyde hydrate

aniline

2-iminopropanoate

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

4-aminobutanal

N-acetylputrescine

spermine

spermidine

cadaverine

putrescine

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

N-acetyl-serotonin

serotonin

ferribactin

pyoverdine I

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

thyroxine sulfate

3,5,3'-triiodo-L-thyronine

triiodothyronine sulfate

L-thyroxine

2-chloroacetate

allantoate

acetamide

(S)-(+)-allantoin

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

nicotinamide

ethene

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

cholest-4-en-3-one

cholest-dien-3-one

3-oxo-23,24-bisnorchol-1,4-dien-22-yl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

pregnenolone

campest-4-en-3-one

progesterone

testosterone

campest-4-en-3β-ol

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

5α-androstane-3,17-dione

cholate

glycocholate

3-dehydrocholate

isocholate

androsterone

(+)-7-epi-jasmonate

phenylacetate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

2-methylbutanoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

phenylacetyl-CoA

3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA

choloyl-CoA

chenodeoxycholoyl-CoA

benzoyl-CoA

isovaleryl-CoA

3-methylcrotonyl-CoA

3-methylglutaconyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

(2E,5Z)-tetradecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

dihomo γ-linolenoyl-CoA

3'-dephospho-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

4-hydroxybenzoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

isobutanoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

methylacrylyl-CoA

malonyl-CoA

succinyl-CoA

2-methylacetoacetyl-CoA

acetyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-octadec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dodec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(S)-malyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

hexanoyl-CoA

decanoyl-CoA

lauroyl-CoA

octanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

all-trans-retinyl palmitate

L-galactono-1,4-lactone

cis-dienelactone

trans-dienelactone

L-homoserine lactone

PAI-1

HAI-1

PAI-1-2

VAI-1

VAI-1-2

AAI-1

D-glucono-1,5-lactone

FAD

FADH₂

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

ubiquinol-10

ubiquinol-7

ubiquinol-9

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-10

3-demethylubiquinol-7

3-demethylubiquinol-9

3-demethylubiquinol-8

(R)-lipoate

coenzyme A

guanylyl molybdenum cofactor

thio-molybdenum cofactor

MoO₂-molybdopterin cofactor

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

L-ascorbate

thiamine

nicotinate

riboflavin

all-trans-retinoate

all-trans-retinol

all-trans-retinal

pyridoxal

pyridoxal 5'-phosphate

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine

pyridoxine 5'-phosphate

menadione

(S)-1-pyrroline-5-carboxylate

guanine

adenine

2'-deoxyadenosine

2'-deoxyguanosine

adenosine

xanthosine

inosine

guanosine

hypoxanthine

dAMP

dGMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

GMP

IMP

XMP

AMP

ITP

GTP

ATP

dipicolinate

dCMP

dTTP

dTDP

cytosine

5,6-dihydrothymine

5,6-dihydrouracil

uracil

dUDP

UDP

dCDP

CDP

CTP

dCTP

dTMP

dUTP

dUMP

orotate

UTP

5-fluorouracil

uridine

cytidine

2'-deoxyuridine

2'-deoxycytidine

thymidine

thymine

CMP

UMP

UDP-α-D-galacturonate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-galactose

UDP-α-D-glucuronate

UDP-α-D-glucose

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-α-D-glucose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

isoguanine

preQ₁

adenosylcobalamin

cob(I)alamin

cobalt-precorrin-3

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-4

cobalt-precorrin-5A

precorrin-1

precorrin-5

precorrin-3B

precorrin-4

precorrin-7

precorrin-8x

cobalt-precorrin-5B

cobalt-precorrin-6A

precorrin-2

precorrin-3A

precorrin-6B

precorrin-6A

sirohydrochlorin

cobyrinate

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropterin

7,8-dihydroneopterin 2',3'-cyclic phosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropteroate

6-carboxy-5,6,7,8-tetrahydropterin

baicalein

6,7-dehydrobaicalein

quercetin

(+)-taxifolin

(+)-dihydrokaempferol

(+)-dihydromyricetin

(2R,3S,4S)-leucopelargonidin

(2R,3S,4S)-leucocyanidin

(2R,3S,4S)-leucodelphinidin

acrylonitrile

(indole-3-yl)acetonitrile

preQ₀

hydrogen cyanide

salicylaldehyde

cyanuric acid

benzene

4-tyrosol

urate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

4-methylphenol

2,3-dihydroxybenzoate

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

3-methylcatechol

L-dopa

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

dopamine

catechol

protocatechuate

dimeric urushiol peroxide

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

3-hydroxy-trans-cinnamate

2,3-dihydroxy-trans-cinnamate

ferulate

trans-cinnamate

salicylate

4-aminobenzoate

benzoate

atrazine

3-methoxy-4-hydroxyphenylglycol

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

geranate

3-oxo-dodecanoate

3-oxooctanoate

L-α-amino-ε-keto-pimelate

L-cysteine

L-asparagine

L-threonine

L-tyrosine

L-glutamine

L-serine

glycine

L-lysine

L-histidine

L-arginine

L-aspartate

L-glutamate

L-phenylalanine

L-tryptophan

D-lysine

D-aspartate

cis-4-hydroxy-D-proline

D-serine

D-glutamate

D-alanine

L-saccharopine

seleno-L-homocysteine

S-sulfanyl-L-cysteine

L-aspartyl-4-phosphate

sarcosine

N⁵-formyl-N⁵-hydroxy-L-ornithine

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-(3-oxooctanoyl)-L-homoserine

N-(3-hydroxybutanoyl)-L-homoserine

N-(3-oxododecanoyl)-L-homoserine

N-(butyryl)-L-homoserine

N-(3-oxohexanoyl)-L-homoserine

N-(octanoyl)-L-homoserine

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-methionine

N-acetyl-L-glutamate

N⁵-hydroxy-L-ornithine

N-carbamoyl-L-aspartate

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

L-threonine 3-O-phosphate

3-phospho-L-serine

L-citrulline

L-4-hydroxyglutamate semialdehyde

1-aminocyclopropane-1-carboxylate

hypoglycin A

L-canaline

L-cystine

S-sulfo-L-cysteine

O-succinyl-L-homoserine

O-phospho-L-homoserine

L-homocysteine

L-aspartate 4-semialdehyde

L-glutamate-5-semialdehyde

L-homoserine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-ornithine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-methionine

L-valine

L-isoleucine

L-proline

L-leucine

L-alanine

L-isoglutamine

L-cystathionine

L-2,4-diaminobutanoate

L,L-diaminopimelate

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

(15Z)-tetracosenoate

butanoate

heptanoate

decanoate

octanoate

oleate

(3E,5Z)-tetradecadienoate

apo-4'-lycopenoate

di-homo-γ-linolenate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

phytenate

stearate

palmitate

acetate

D-gluconate

(R)-pantoate

4-deoxy-L-threo-hex-4-enopyranuronate

aldehydo-D-galacturonate

aldehydo-D-glucuronate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

pyruvate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

2-oxobutanoate

2-oxoglutarate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

chorismate

fumarate

succinate

(S)-malate

D-galactarate

D-glucarate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

trans-aconitate

cis-aconitate

(2R,3S)-2-methylisocitrate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

(R)-3-hydroxybutanoate

(R)-lactate

(S)-lactate

(S)-2-hydroxyglutarate

(R)-glycerate

formate

propanoate

3-oxohexanoate

3-oxoadipate

a coenzyme-A group

dopaquinone

methylglyoxal

diacetyl

3-(N-morpholino)propanal

glycolaldehyde

geranial

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-ribopyranose

β-D-galactopyranose

α-D-galactopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

1-propanal

1-heptanal

1-octanal

isobutanal

formaldehyde

acetaldehyde

butan-1-al

(S)-lactaldehyde

(R)-lactaldehyde

phytenal

(3R)-linalool

(3S)-linalool

3,5-cyclohexadiene-1,2-diol-1-carboxylate

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

butan-1-ol

propan-1-ol

methanol

ethanol

1-octanol

phytol

glycerol

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

1-oleoyl-2-lyso-glycerone phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

geranyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-decaprenyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

apo-4'-lycopenal

hydroxy-β-zeacarotene

β-cryptoxanthin

zeaxanthin

plectaniaxanthin

myxol

β-carotene

β-zeacarotene

3-nonaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

galactosyl-glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₃-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₂-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

heptosyl-Kdo₂-lipid A

(heptosyl)₂-Kdo₂-lipid A

glucosyl-(heptosyl)₂-Kdo₂-lipid A

glucosyl-(heptosyl)₂-Kdo₂-lipid A-phosphate

α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

leucodopachrome

betanidin

betanidin quinone

1-(β-D ribofuranosyl)nicotinamide

maltotriose

maltotetraose

maltopentaose

maltoheptaose

maltohexaose

sucrose

α,α-trehalose

neoagarobiose

neoagarotetraose

neoagarohexaose

agaropentaose

agarotriose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

β-D-fructofuranose

3,6-anhydro-α-L-galactopyranose

D-xylulose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faecium, tetrapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

GDP-α-D-glucose

ADP-α-D-glucose

GDP-α-D-rhamnose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannuronate

GDP-α-D-mannose

aldehydo-L-galactonate

L-gulonate

8-oxo-GTP

8-oxo-dGTP

cyclic-AMP

ppGpp

pppGpp

1-(5-phospho-β-D-ribosyl)-ATP

5'-deoxyadenosine

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-AMP

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

reduced β-nicotinamide D-ribonucleotide

β-nicotinamide D-ribonucleotide

cyclic di-3',5'-guanylate

5-fluorocytosine

hypoglycin B

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

2-iminosuccinate

2-iminobutanoate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

protochlorophyllide a

cobalt-factor III

cobalt-sirohydrochlorin

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

adenosylcobyrate

Mg-protoporphyrin

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

protoheme

N₂

protoporphyrin IX

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrinogen IX

uroporphyrinogen-III

(Z,Z)-biliverdin-IX α

siroheme

S⁰

hydrogen sulfide

oxygen

sn-glycerol 3-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

4-dimethylaminophenylazobenzene

(2R)-2,3-dihydroxy-3-methylbutanoate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(S)-ureidoglycine

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

monodehydroascorbate radical

hydroxyl radical

nitric oxide