an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

bisorganyltrisulfane

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

L-dehydro-ascorbate

5-hydroxyindole thiazolidine carboxylate

ammonia

1-piperideine 6-carboxylate

α-D-galacturonate 1-phosphate

1,5-anhydro-D-fructose

octadecanal

lipid IV_A

pseudouridine

mercuriphenyl acetate

(2S)-lactyl-2-diphospho-5'-guanosine

(S)-ureidoglycolate

selenodiglutathione

glutathioselenol

chloroacetaldehyde

L-xylo-hex-3-ulono-1,4-lactone

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

N⁵-carboxyaminoimidazole ribonucleotide

2-amino-3-carboxymuconate-6-semialdehyde

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

7-epicholate

4-amino-2-methyl-5-pyrimidinemethanol

5-amino-6-(5-phospho-D-ribitylamino)uracil

5,6-dimethylbenzimidazole

dialurate

2-oxoadipate

xanthine

(S)-5-hydroxyisourate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

creatinine

N²-succinyl-L-glutamate 5-semialdehyde

4-acetamidobutanal

4-acetamidobutanoate

ethanolamine

4-amino-4-deoxychorismate

(S)-2-amino-6-oxohexanoate

lanthionine

N-acetyl-D-muramate 6-phosphate

3-methyl-2-butenal

presqualene diphosphate

N²-succinylglutamate

N-(2,3-dihydroxybenzoyl)-L-serine trimer

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

31-O-desmethylFK-506

FK-506

DNA without lesion

S-adenosyl 3-(methylsulfanyl)propylamine

hydrogenobyrinate

2-oleoylglycerol

(L-threonylcarbamoyl)adenylate

H₂

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

N-Formyl-L-kynurenine

urocanate

15,16-dihydrobiliverdin

shikimate

β-D-ribosylnicotinate

4-hydroxy-2-nonenal

succinate semialdehyde

N-acetyl-L,L-2,6-diaminopimelate

cyanate

carbonic acid

3-mercaptopyruvate

3-demethylubiquinol-6

5-deoxy-α-ribose 1-phosphate

S-methyl-5'-thioadenosine

N-acetylglutamyl-phosphate

dihydroxyacetone

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

5-carboxymethyl-2-hydroxymuconate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

7,8-diaminopelargonate

dethiobiotin

D-gluconate 6-phosphate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

histamine

pimeloyl-CoA

8-amino-7-oxononanoate

dihydrolipoamide

S-acetyldihydrolipoamide

histidinal

histidinol

L-gulono-1,4-lactone

3-dehydroshikimate

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

2-iminoacetate

N-ethylglycine

ethylamine

methylamine

shikimate 3-phosphate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

methylsalicylate

salicyl alcohol

2-isopropylmaleate

N-(5-phosphoribosyl)-anthranilate

2-C-methyl-D-erythritol 4-phosphate

glutathione disulfide

acetyl phosphate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

L-histidinol phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

all-trans-13,14-dihydroretinol

3-dehydroquinate

5-enolpyruvoyl-shikimate 3-phosphate

arsenite

2-(β-D-glucosyl)-sn-glycerol 3-phosphate

2-O-(β-D-glucopyranosyl)-glycerol

carbamoyl phosphate

prenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

L-canavanine

α-ribazole

α-ribazole 5'-phosphate

isochorismate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

preuroporphyrinogen

N-acetyl-L-glutamate 5-semialdehyde

carbon monoxide

(S)-3-methyl-2-oxopentanoate

3-amino-1-hydroxyacetone 1-phosphate

(7R)-7-(4-carboxybutanamido)cephalosporanate

glutarate

2-phosphoglycolate

glycolate

7,8-didemethyl-8-hydroxy-5-deazariboflavin

oxalate

citrate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

6-phospho D-glucono-1,5-lactone

(S)-4-amino-5-oxopentanoate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

tartronate semialdehyde

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

(R)-2,3-dihydroxy-3-methylpentanoate

prephytoene diphosphate

2-phenylethanol

2-methylbutanol

2-methylbutanal

3-methylbutanol

3-methylbutanal

isobutanol

indole-3-glycol

indole-3-glycol aldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

S-formylglutathione

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

isopentenyl diphosphate

orotidine 5'-phosphate

3-phosphooxypyruvate

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

(3R,6R)-1,3,4,6-tetrachlorocyclohexa-1,4-diene

(1S,4R)-2,4,5-trichloro-2,5-cyclohexadiene-1-diol

1,2-dichloroethane

2-chloroethanol

γ-L-glutamyl 5-phosphate

(R)-pantothenate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

pseudouridine 5'-phosphate

oxalosuccinate

lipid X

lipid A disaccharide (E. coli)

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

oxaloacetate

hydrogen selenide

O-acetyl-L-serine

2-dehydropantoate

4'-phosphopantetheine

(S)-2,3,4,5-tetrahydrodipicolinate

α-D-glucosamine 1-phosphate

5-aminolevulinate

porphobilinogen

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

coproporphyrinogen III

anthranilate

squalene

hop-22(29)-ene

5-(methylsulfanyl)-ribulose 1-phosphate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

2-maleylacetate

urea

nicotinate adenine dinucleotide

1,4-dihydroxy-2-naphthoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

6-deoxyerythronolide B

3-methyl-2-oxobutanoate

(2S)-2-isopropylmalate

thiamine phosphate

α-D-galactosyl-diphosphoundecaprenol

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

3'-phosphoadenylyl-sulfate

2-succinylbenzoate

5-oxo-L-proline

2-oxoglutaramate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

ManNAc-GlcNAc-PP-undecaprenol

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

1,4-dihydroxy-2-naphthoyl-CoA

enol-phenylpyruvate

(2-hydroxyphenyl)acetate

homogentisate

4-maleyl-acetoacetate

aminoacetone

4-fumaryl-acetoacetate

acetoacetate

(S)-dihydroorotate

β-nicotinate D-ribonucleotide

quinolinate

glycerone phosphate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

prephenate

3-deoxy-D-arabino-heptulosonate 7-phosphate

O-ureido-L-homoserine

canavaninosuccinate

L-arginino-succinate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

CO₂

hydrogen peroxide

(R)-1-amino-2-propanol O-2-phosphate

(R)-1-aminopropan-2-ol

hydrogenobyrinate a,c-diamide

phosphoenolpyruvate

H₂O

(2E,6E)-farnesyl diphosphate

pristanate

4-methylphenol

L-homocysteine

2-iminosuccinate

2-iminobutanoate

cyanophycin primer

cyanophycin primer-L-aspartate

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

carboxyphosphinopyruvate

3-(hydroxyphosphinoyl)pyruvate

1-carboxyvinyl carboxyphosphonate

adenosylcobalamin

cob(I)alamin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-6A

cobalt-precorrin-4

cob(II)yrinate c-monoamide

cobyrinate

cobalt-precorrin-2

cobalt-precorrin-3

cobalt-sirohydrochlorin

cobalt-factor III

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

chlorophyll a

Mg-protoporphyrin

cob(I)yrinate a,c-diamide

cob(I)inamide

cobalt-precorrin-5A

cobalt-precorrin-5B

3,8-divinyl chlorophyllide a

chlorophyllide a

protochlorophyllide a

adenosyl-cob(III)yrinate a,c-diamide

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

magnesium-protoporphyrin IX 13-monomethyl ester

adenosyl-cobinamide phosphate

adenosylcobyrate

adenosylcobinamide

cob(II)yrinate a,c-diamide

protoheme

N₂

hydrogen cyanide

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrin IX

uroporphyrinogen-III

protoporphyrinogen IX

siroheme

(Z,Z)-bilirubin-IX α

(Z,Z)-biliverdin-IX α

(3Z)-phycoerythrobilin

(2R,3Z)-phycocyanobilin

Hg⁰

hydrogen sulfide

oxygen

2-chloroacetate

sn-glycerol 3-phosphate

2-O-(α-D-glucopyranosyl)-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-3-phospho-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-D-glycerate

2,3-diphospho-D-glycerate

2-O-(α-D-mannosyl)-3-phospho-D-glycerate

2-O-(α-D-mannosyl)-D-glycerate

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

2-O-(α-D-glucopyranosyl)-3-phospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2S)-2-phospholactate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

N-acetyl-D-mannosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

1-oleoyl-2-lyso-glycerone phosphate

CMP-N-acetyl-β-neuraminate

(R)-citramalate

5,10-methenyltetrahydrofolate mono-L-glutamate

2-octaprenylphenol

superoxide

hydroxyl radical

monodehydroascorbate radical

nitric oxide

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

N-acetyl-β-neuraminate

S-(hydroxymethyl)glutathione

dimethyl sulfide

S-methyl-L-methionine

methionol

3-(methylsulfanyl)propanal

glutathione

thiocyanate

methanethiol

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

L-cysteate

3-sulfopyruvate

taurine

(2R)-3-sulfolactate

(2R)-phospho-3-sulfolactate

(R)-S-lactoylglutathione

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

fluoride

chloride

phosphonate

phosphate

triphosphate

diphosphate

Fe³⁺

H⁺

K⁺

ammonium

Co²⁺

Cu²⁺

Ca²⁺

Hg²⁺

Mg²⁺

Fe²⁺

Zn²⁺

(2Z)-2-aminobut-2-enoate

agmatine

spermine

spermidine

putrescine

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

fluoroacetate

2,5-dichlorophenol

allantoate

(7R)-7 aminocephalosporanate

(S)-(+)-allantoin

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

nicotinamide

ethene

heptadecane

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

zymosterone

3-dehydro-4-methylzymosterol

5α-cholesta-8-en-3-one

4α-methyl-5α-cholesta-8-en-3-one

4α-methyl-5α-cholest-7-en-3-one

3-dehydrocholate

isocholate

glycocholate

cholate

4α-carboxy-5α-cholesta-8,24-dien-3β-ol

4α-carboxy-4β-methyl-5α-cholesta-8,24-dien-3β-ol

4α-carboxy-5α-cholesta-8-en-3β-ol

4α-carboxy-4β-methyl-5α-cholesta-8-en-3β-ol

3β-hydroxy-4β-methyl-5α-cholest-7-ene-4α-carboxylate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

2-cis-abscisate

phaseic acid

8'-hydroxyabscisate

2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

trans-caffeoyl-CoA

trans-feruloyl-CoA

succinyl-CoA

isobutanoyl-CoA

3'-dephospho-CoA

linoleoyl-CoA

α-linolenoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

2-methylacetoacetyl-CoA

acetyl-CoA

malonyl-CoA

(S)-methylmalonyl-CoA

phytenoyl-CoA

phytanoyl-CoA

oleoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

decanoyl-CoA

octanoyl-CoA

palmitoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

all-trans-retinyl palmitate

L-galactono-1,4-lactone

trans-dienelactone

cis-dienelactone

erythronolide B

3-α-mycarosylerythronolide B

erythromycin D

D-glucono-1,5-lactone

FMNH₂

FAD

FMN

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

phylloquinol

caldariellaquinol

ubiquinol-10

ubiquinol-7

ubiquinol-6

ubiquinol-8

ubiquinol-9

menaquinol-8

menaquinol-6

menaquinol-7

demethylmenaquinol-8

demethylmenaquinol-6

demethylmenaquinol-7

3-demethylubiquinol-10

3-demethylubiquinol-7

3-demethylubiquinol-8

3-demethylubiquinol-9

caldariellaquinone

molybdopterin

coenzyme A

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

oxidized coenzyme F₄₂₀-0

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

nicotinate

L-ascorbate

thiamine

riboflavin

pyridoxine

pyridoxal

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

δ-tocotrienol

β-tocotrienol

γ-tocotrienol

α-tocotrienol

δ-tocopherol

β-tocopherol

γ-tocopherol

α-tocopherol

menadione

all-trans-retinol

all-trans-retinal

(S)-1-pyrroline-5-carboxylate

precorrin-3B

precorrin-6A

precorrin-7

precorrin-8x

precorrin-6B

precorrin-3A

precorrin-4

precorrin-5

precorrin-1

precorrin-2

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

cyclic pyranopterin phosphate

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

guanine

adenine

2'-deoxyguanosine

2'-deoxyadenosine

2'-deoxyinosine

xanthosine

guanosine

adenosine

inosine

hypoxanthine

dAMP

dGMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

XMP

GMP

IMP

AMP

ITP

GTP

ATP

dUMP

uridine 3'-monophosphate

cytidine-3'-monophosphate

orotate

dUDP

dUTP

dTTP

dCTP

dCMP

dCDP

CDP

dTMP

dTDP

uracil

UTP

CTP

UDP

UDP-α-D-galacturonate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramate

UDP-β-L-iduronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-galactose

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-sulfoquinovopyranose

UDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-galactosamine

UDP-N-acetyl-α-D-glucosamine

UDP-α-D-xylose

dTDP-D-desosamine

dTDP-β-L-mycarose

dTDP-α-D-glucose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

CDP-α-D-paratose

CDP-α-tyvelose

CDP-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

cytidine

uridine

2'-deoxycytidine

2'-deoxyuridine

CMP

UMP

isoguanine

preQ₁

baicalein

6,7-dehydrobaicalein

(indole-3-yl)acetonitrile

preQ₀

salicylaldehyde

benzene

urate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

4-tyrosol

4-hydroxybenzoate

3-methoxy-4-hydroxyphenylglycol

benzaldehyde

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

demethylphylloquinol

2-methyl-6-geranylgeranyl-1,4-benzoquinol

2,3-dimethyl-6-geranylgeranyl-1,4-benzoquinol

2,3-dimethyl-6-phytyl-1,4-benzoquinol

2-methyl-6-phytyl-1,4-benzoquinol

menadiol

protocatechuate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

salicylate

4-aminobenzoate

benzoate

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

L-kynurenine

carbamate

L-serine

creatine

β-alanine

L-leucine

L-proline

L-glutamine

glycine

L-alanine

D-glutamate

L-glutamate

L-lysine

L-histidine

L-arginine

L-aspartate

L-asparagine

L-tyrosine

L-threonine

L-cysteine

L-tryptophan

L-phenylalanine

D-phenylalanine

D-ornithine

D-alanine

L-saccharopine

L-aspartyl-4-phosphate

L-2-amino-3-oxobutanoate

L-threonine 3-O-phosphate

3-phospho-L-serine

sarcosine

L-2-acetamido-6-oxoheptanedioate

N-acetyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

L-citrulline

L-valine

L-isoleucine

L-4-hydroxyglutamate semialdehyde

L-homoserine

L-aspartate 4-semialdehyde

L-ornithine

O-phospho-L-homoserine

L-glutamate-5-semialdehyde

hypoglycin A

S-sulfo-L-cysteine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-methionine

L-2,4-diaminobutanoate

L,L-diaminopimelate

chorismate

succinate

fumarate

(S)-malate

(1R,2S)-homoisocitrate

cis-homoaconitate

(2R)-homocitrate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

cis-aconitate

D-threo-isocitrate

(S)-lactate

(R)-lactate

pyruvate

acetate

formate

butanoate

decanoate

octanoate

(15Z)-tetracosenoate

oleate

γ-linolenate

linoleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

apo-4'-lycopenoate

phytenate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

dinor-12-oxo-phytodienoate

palmitate

D-gluconate

(R)-pantoate

aldehydo-D-glucuronate

aldehydo-D-galacturonate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

2-oxoglutarate

2-oxobutanoate

methylglyoxal

diacetyl

glycolaldehyde

butan-1-al

1-octanal

isobutanal

1-propanal

formaldehyde

acetaldehyde

(S)-lactaldehyde

(R)-lactaldehyde

phytenal

L-glyceraldehyde

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

aldehydo-D-mannose

β-D-mannopyranose

α-D-galactopyranose

β-D-galactopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

aldehydo-L-arabinose

butan-1-ol

methanol

propan-1-ol

ethanol

phytol

glycerol

L-arabinitol

D-mannitol

galactitol

sphinganine (C20)

3-dehydrosphinganine (C20)

3-dehydrosphinganine

L-threo-sphinganine

D-erythro-sphinganine

myo-inositol

scyllo-inosose

1-amino-1-deoxy-scyllo-inositol

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

geranyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

geranylgeranyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

torulene

apo-4'-lycopenal

β-carotene 15,15' epoxide

all-trans phytofluene

all-trans-3,4-didehydrolycopene

all-trans-phytoene

all-trans neurosporene

all-trans-lycopene

all-trans-ζ-carotene

15,15'-dihydroxy-β-carotene

β-carotene

15-cis-phytoene

4'-apo-β-carotenal

phytyl diphosphate

3-octaprenyl-4-hydroxybenzoate

betanidin

betanidin quinone

ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex

iron(III) dicitrate

ferric-enterobactin complex

1-(β-D ribofuranosyl)nicotinamide

maltotriose

maltotetraose

maltoheptaose

maltopentaose

maltohexaose

sucrose

α,α-trehalose

1,5-anhydro-D-mannitol

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

β-D-fructofuranose

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (mycobacteria)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

ADP-α-D-glucose

GDP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-β-L-fucose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

4-phospho-D-erythronate

D-sedoheptulose 1,7-bisphosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

aldehydo-L-galactonate

L-gulonate

8-oxo-GTP

8-oxo-dGTP

cyclic-AMP

adenosine 3'-monophosphate

guanosine 3'-monophosphate

1-(5-phospho-β-D-ribosyl)-AMP

adenylo-succinate

cyclic-GMP

pppGpp

ppGpp

1-(5-phospho-β-D-ribosyl)-ATP

5'-deoxyadenosine

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

two adjacent thymidines in DNA

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5-hydroxy-CTP

2-hydroxy-dATP

reduced β-nicotinamide D-ribonucleotide

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

hypoglycin B