an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

4-oxoglutaramate

pyruvic oxime

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

H₂O

L-selenocystathionine

xanthine

O-acetyl-L-serine

hydrogen selenide

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

2-amino-2-deoxy-D-gluconate 6-phosphate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-muramate 6-phosphate

lipoamide

dihydrolipoamide

S-acetyldihydrolipoamide

CO₂

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

phosphoenolpyruvate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

oxaloacetate

1,4-dihydroxy-2-naphthoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

isochorismate

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

L-canavanine

O-D-alanyl-poly(ribitol phosphate)

poly(ribitol phosphate)

3-dehydroshikimate

3-dehydroquinate

methylsalicylate

salicyl alcohol

glycerone phosphate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

3-methyl-2-oxobutanoate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-phosphooxypyruvate

ethanolamine

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

carbon monoxide

glycolate

formamide

prenyl diphosphate

isopentenyl diphosphate

2-dehydropantoate

D-gluconate 6-phosphate

3,4-dihydroxyphenylacetaldehyde

propynoate

prop-2-ynal

dimethylsulfoniopropanoate

4-acetamidobutanoate

4-acetamidobutanal

4-imidazoleacetate

imidazole acetaldehyde

5-hydroxyindole acetate

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

D-glucurono-6,3-lactone

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

N⁵-carboxyaminoimidazole ribonucleotide

quinolinate

1,6-anhydro-N-acetyl-β-muramate

(R)-4'-phosphopantothenate

(R)-pantothenate

autoinducer 2

S-ribosyl-L-homocysteine

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

glutathioselenol

selenodiglutathione

α-D-glucosamine 1-phosphate

histidinal

histidinol

D-erythro-imidazole-glycerol-phosphate

carbamoyl phosphate

(S)-dihydroorotate

orotidine 5'-phosphate

4-amino-2-methyl-5-pyrimidinemethanol

(R)-4'-phosphopantothenoyl-L-cysteine

4'-phosphopantetheine

urocanate

4-imidazolone-5-propanoate

aminoacetone

indole-3-glycol aldehyde

indole-3-glycol

2-methylbutanal

2-methylbutanol

isobutanol

5-hydroxytryptophol

3-methylbutanal

3-methylbutanol

2-phenylethanol

(R)-mevalonate diphosphate

(R)-5-phosphomevalonate

(R)-mevalonate

acetyl phosphate

citrate

oxalosuccinate

preuroporphyrinogen

porphobilinogen

L-histidinol phosphate

imidazole acetol-phosphate

anthranilate

CDP-glycerol

S-formylglutathione

hydrogen peroxide

urea

(indol-3-yl)pyruvate

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

2,5-didehydro-D-gluconate

2-keto-D-gluconate

6-phospho D-glucono-1,5-lactone

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

2-succinylbenzoate

coproporphyrinogen III

5-(methylsulfanyl)-α-D-ribose

S-methyl-5'-thioadenosine

shikimate

nicotinate adenine dinucleotide

β-nicotinate D-ribonucleotide

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

(S)-2,3,4,5-tetrahydrodipicolinate

N-(5-phosphoribosyl)-anthranilate

4-amino-4-deoxychorismate

prephenate

arsenite

iminodiacetate

nitrilotriacetate

vanillin

L-gulono-1,4-lactone

β-D-ribosylnicotinate

succinate semialdehyde

4-aminobutanoate

glucosyl-4,4'-diaponeurosporenoate

12-methyltetradecanoate

15-cis-4,4'-diapophytoene

presqualene diphosphate

2-phosphoglycolate

2-iminoacetate

ethylamine

N-ethylglycine

methylamine

1,4-dihydroxy-2-naphthoate

(lipoyl)adenylate

acetoacetate

4-fumaryl-acetoacetate

DNA without lesion

urea-1-carboxylate

dihydroxyacetone

hydroxylamine

ammonia

(L-threonylcarbamoyl)adenylate

(indol-3-yl)acetamide

4-guanidinobutanoate

4-guanidinobutyramide

propionamide

acrylate

acrylamide

pyrazine-2-carboxylate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

hexulose 6-phosphate

ManNAc-GlcNAc-PP-undecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

H₂

5-ureidoimidazole-4-carboxylate

5-aminoimidazole-4-carboxylate

4-aminoimidazole

3,5-dihydro-4H-imidazol-4-one

glutathione disulfide

hydroxypyruvate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

N-acetyl-L,L-2,6-diaminopimelate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

(2R)-2-amino-4-oxopentanoate

(2R,4S)-2, 4-diaminopentanoate

5-aminopentanoate

2-amino-3-carboxymuconate-6-semialdehyde

(2E,6E)-farnesol

(2E,6E)-farnesyl diphosphate

pristanate

ethene

hydroquinone

3,4-dihydroxyphenylacetate

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

myo-inositol

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 5-monophosphate

propan-1-ol

phytol

ethanol

butan-1-ol

methanol

(3S)-linalool

(3R)-linalool

glycerol

galactitol

D-sorbitol

L-iditol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

sn-glycero-3-phosphocholine

thiamine

riboflavin

nicotinate

nicotinamide

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

all-trans-retinol

L-carnitine

FAD

FMN

FMNH₂

FADH₂

NADH

NADPH

NAD⁺

NADP⁺

caldariellaquinol

menaquinol-8

demethylmenaquinol-8

caldariellaquinone

(R)-NADHX

(S)-NADHX

glycine betaine

coenzyme A

(R)-lipoate

molybdopterin

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

choline

betaine aldehyde

betaine aldehyde hydrate

spermidine

putrescine

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

ferrichrome

preQ₀

hydrogen cyanide

S-(hydroxymethyl)glutathione

3-dimethylsulfoniopropionaldehyde

3-(methylsulfanyl)propanal

methionol

S-methyl-L-methionine

dimethyl sulfide

glutathione

thiocyanate

methanethiol

S-sulfanylglutathione

3-sulfopyruvate

L-cysteate

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

(R)-S-lactoylglutathione

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

superoxide

phosphonate

phosphate

diphosphate

triphosphate

Fe³⁺

Cu²⁺

Co²⁺

Mn²⁺

Fe²⁺

ammonium

H⁺

2-iminobutanoate

2-iminosuccinate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-homocysteine

4-methylphenol

5,10-methenyltetrahydrofolate mono-L-glutamate

hydroxyl radical

1-oleoyl-2-lyso-glycerone phosphate

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

2,3-diphospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

hydrogen sulfide

oxygen

uroporphyrinogen-III

protoporphyrin IX

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

(Z,Z)-biliverdin-IX α

siroheme

protoheme

cobyrinate

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-sirohydrochlorin

cobalt-precorrin-3

cobalt-factor III

cob(II)yrinate c-monoamide

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

ethylphosphate

DNA with lesion

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

D-alanine

D-aspartate

D-glutamate

D-ornithine

D-proline

L-phenylalanine

L-tryptophan

L-tyrosine

L-histidine

L-glutamine

L-cysteine

glycine

L-threonine

L-serine

L-asparagine

L-arginine

L-lysine

L-glutamate

L-aspartate

L-alanine

L-proline

L-leucine

β-alanine

L-citrulline

L-isoleucine

L-valine

L-methionine

L-4-hydroxyglutamate semialdehyde

O-succinyl-L-homoserine

S-sulfo-L-cysteine

L-cystine

L-homoserine

L-glutamate-5-semialdehyde

L-ornithine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

meso-diaminopimelate

L-selenocysteine

L-isoglutamine

L-cystathionine

L-aspartyl-4-phosphate

L,L-diaminopimelate

formyl-L-isoglutamine

L-2-acetamido-6-oxoheptanedioate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-formimino-L-glutamate

N-carbamoyl-L-aspartate

L-selenomethionine

seleno-L-homocysteine

S-sulfanyl-L-cysteine

L-2-amino-3-oxobutanoate

D-nopaline

3-phospho-L-serine

N-formimino-glycine

sarcosine

N-acetyl-L-glutamate

isoguanine

ADP

ATP

XMP

IMP

GMP

5'-deoxyadenosine

hypoxanthine

2'-deoxyinosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

2'-deoxyadenosine

2'-deoxyguanosine

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

GDP

dGDP

dGTP

GTP

dADP

dATP

pppGpp

ppGpp

adenylo-succinate

ITP

IDP

dITP

dIDP

cyclic-AMP

8-oxo-dGMP

8-oxo-dGTP

dGMP

dAMP

dIMP

XTP

8-oxo-GMP

8-oxo-GTP

AMP

inosine

xanthosine

guanosine

adenosine

2'-deoxyuridine

thymidine

2'-deoxycytidine

uridine

cytidine

UDP-α-D-glucose

GDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

ADP-D-ribose

GDP-α-D-mannose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

5'-deoxy-5'-fluoroadenosine

preQ₁

adenine

guanine

purine

uracil

thymine

5-hydroxy-CTP

2-hydroxy-dATP

dUDP

dCDP

dTDP

dTTP

dUTP

dCTP

dUMP

dTMP

dCMP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

UMP

CMP

UDP

CDP

UTP

CTP

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

7,8-dihydroneopterin 3'-phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

7,8-dihydroneopterin 3'-triphosphate

cyclic pyranopterin phosphate

molybdopterin adenine dinucleotide

7,8-dihydropteroate

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

precorrin-2

precorrin-1

sirohydrochlorin

orotate

(S)-1-pyrroline-5-carboxylate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

salicylaldehyde

4-tyrosol

urate

6,8-dihydroxypurine

8-hydroxypurine

salicylate

4-aminobenzoate

benzoate

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(2E,5E)-dodeca-2,5-dienoyl-CoA

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

1,2-dibutyrin

tributyrin

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

geranyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

4,4'-diapolycopenedioate glycosyl diester

4,4'-diapolycopen-4,4'-dial

all-trans-4,4'-diapolycopene

all-trans-retinyl palmitate

4,4'-diaponeurosporenal

all-trans-4,4'-diaponeurosporene

4,4'-diaponeurosporenoate

all-trans-4,4'-diapo-ζ-carotene

all-trans-4,4'-diapophytofluene

staphyloxanthin

vanillylamine

penicillin K

isopenicillin N

acetyl-CoA

CoA-disulfide

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

malonyl-CoA

succinyl-CoA

3'-dephospho-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

2-methylacetoacetyl-CoA

2-methylbutanoyl-CoA

trans-feruloyl-CoA

trans-caffeoyl-CoA

(+)-7-epi-jasmonoyl-CoA

(2S)-methylsuccinyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

4-hydroxybutanoyl-CoA

phytenoyl-CoA

oleoyl-CoA

octanoyl-CoA

decanoyl-CoA

pristanoyl-CoA

palmitoyl-CoA

stearoyl-CoA

propanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

(S)-malyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

L-galactono-1,4-lactone

D-galactono-1,4-lactone

D-glucono-1,5-lactone

D-gluconate

L-gulonate

aldehydo-L-galactonate

D-galactonate

1-(β-D ribofuranosyl)nicotinamide

sucrose

keto-D-fructose

keto-L-sorbose

glycolaldehyde

D-glyceraldehyde

L-glyceraldehyde

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

α-D-glucopyranose

β-D-glucopyranose

α-D-galactopyranose

β-D-galactopyranose

D-xylulose

β-D-fructofuranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-neuraminate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

N-acetyl-β-D-mannosamine

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

salicin 6-phosphate

arbutin-6-phosphate

methyl β-D-glucoside 6-phosphate

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (mycobacteria)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

sucrose 6^F-phosphate

α-lactose 6'-phosphate

β-D-cellobiose 6'-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

D-tagatofuranose 1,6-bisphosphate

D-tagatofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

methylglyoxal

(R)-acetoin

diacetyl

(2E,6E)-farnesal

fluoroacetaldehyde

(S)-lactaldehyde

1-octanal

acetaldehyde

1-propanal

isobutanal

formaldehyde

butan-1-al

phytenal

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

palmitate

oleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

linoleate

stearate

phytenate

(15Z)-tetracosenoate

sophorosyloxydocosanoate

13-[O(2')-β-D-glucopyranosyl-β-D-glucopyranosyloxy]docosanoate O(6'')-acetate

13-sophorosyloxydocosanoate 6',6''-diacetate

octanoate

decanoate

(2E,6E)-farnesoate

butanoate

pyruvate

2-oxobutanoate

2-oxoglutarate

glyoxylate

4-(methylsulfanyl)-2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

acetate

formate

propanoate

(S)-lactate

(R)-lactate

4-hydroxybutanoate

4,4'-diapolycopenedioate

chorismate

succinate

fumarate

(S)-malate

D-glucarate

cis-aconitate

D-threo-isocitrate

(R)-pantoate

fluoroacetate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

pyrazinamide

acetamide

(+)-7-epi-jasmonate

(indol-3-yl)acetate

methyl (indol-3-yl)acetate