an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

S-ribosyl-L-homocysteine

autoinducer 2

selenodiglutathione

glutathioselenol

lipid IV_A

(2S)-lactyl-2-diphospho-5'-guanosine

acetoacetate

hydroxypyruvate

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

enol-phenylpyruvate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

1-piperideine-2-carboxylate

1-piperideine 6-carboxylate

5-aminopentanoate

xanthine

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

L-dehydro-ascorbate

pseudouridine

α-D-galacturonate 1-phosphate

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

ammonia

phosphoenolpyruvate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5,6-dimethylbenzimidazole

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

dialurate

carbamoyl phosphate

acetyl phosphate

5-amino-6-(5-phospho-D-ribitylamino)uracil

thiamine phosphate

5-amino-6-(5-phospho-D-ribosylamino)uracil

thiamine diphosphate

oxaloacetate

hydrogen peroxide

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

1,4-dihydroxy-2-naphthoyl-CoA

4'-phosphopantetheine

CO₂

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

4,4'-dihydroxy-3,3'-dimethoxystilbene

vanillin

H₂O

2-iminoacetate

1-deoxy-L-glycero-tetrulose 4-phosphate

N⁵-carboxyaminoimidazole ribonucleotide

4-hydroxy-2-nonenal

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol

indole-3-glycol aldehyde

isobutanol

3-methylbutanol

3-methylbutanal

2-methylbutanol

2-methylbutanal

2-phenylethanol

2-amino-3-carboxymuconate-6-semialdehyde

oxalosuccinate

3-phosphooxypyruvate

5-methylcytosine

hydrogen selenide

pseudouridine 5'-phosphate

presqualene diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

isochorismate

β-D-ribosylnicotinate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

α-ribazole

α-ribazole 5'-phosphate

2-maleylacetate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

H₂

2-phosphoglycolate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

prephytoene diphosphate

2-oleoylglycerol

7,8-didemethyl-8-hydroxy-5-deazariboflavin

oxalate

glycolate

carbon monoxide

α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

orotidine 5'-phosphate

arsenite

hydrogenobyrinate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

(S)-2-amino-6-oxohexanoate

DNA without lesion

salicyl alcohol

methylsalicylate

dihydroxyacetone

(S)-2,3,4,5-tetrahydrodipicolinate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

3-ureidopropanoate

5-oxo-L-proline

1,4-dihydroxy-2-naphthoate

squalene

hop-22(29)-ene

O-acetyl-L-serine

3'-phosphoadenylyl-sulfate

6-amino-2-oxohexanoate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

L-arogenate

D-erythro-imidazole-glycerol-phosphate

7,8-diaminopelargonate

succinate semialdehyde

2-dehydropantoate

imidazole acetol-phosphate

L-histidinol phosphate

lipid X

lipid A disaccharide (E. coli)

L-canavanine

3-oxopropanoate

5-enolpyruvoyl-shikimate 3-phosphate

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

3-dehydroshikimate

dethiobiotin

citrate

O-ureido-L-homoserine

canavaninosuccinate

L-arginino-succinate

coproporphyrinogen III

3-dehydroquinate

shikimate

shikimate 3-phosphate

hydrogenobyrinate a,c-diamide

glycerone phosphate

urea

2-C-methyl-D-erythritol 4-phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

5-(methylsulfanyl)-ribulose 1-phosphate

(R)-pantothenate

nicotinate adenine dinucleotide

2-succinylbenzoate

2-isopropylmaleate

5-deoxy-α-ribose 1-phosphate

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

pimeloyl-CoA

8-amino-7-oxononanoate

(2S)-2-isopropylmalate

isopentenyl diphosphate

prenyl diphosphate

(S)-3-methyl-2-oxopentanoate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

(S)-dihydroorotate

3-deoxy-D-arabino-heptulosonate 7-phosphate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

glutathione disulfide

porphobilinogen

preuroporphyrinogen

5-amino-6-(D-ribitylamino)uracil

β-nicotinate D-ribonucleotide

quinolinate

anthranilate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

3-methyl-2-oxobutanoate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-phospho-β-D-ribosylamine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

prephenate

γ-L-glutamyl 5-phosphate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

histidinal

histidinol

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

(R)-1-amino-2-propanol O-2-phosphate

N-(5-phosphoribosyl)-anthranilate

(2E,6E)-farnesyl diphosphate

pristanate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

adenosylcobalamin

cob(I)alamin

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

cobalt-factor III

cobalt-precorrin-3

cobalt-sirohydrochlorin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-4

cobalt-precorrin-5A

cobalt-precorrin-5B

cobalt-precorrin-6A

adenosylcobalamin 5'-phosphate

adenosylcobyrate

cob(II)yrinate c-monoamide

cobyrinate

Mg-protoporphyrin

magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl chlorophyllide a

3,8-divinyl protochlorophyllide a

chlorophyllide a

protochlorophyllide a

cob(II)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

protoheme

hydrogen cyanide

protoporphyrinogen IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrin IX

siroheme

(Z,Z)-biliverdin-IX α

(2R,3Z)-phycocyanobilin

oxygen

hydrogen sulfide

sn-glycerol 3-phosphate

(R)-glycerate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2S)-2-phospholactate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

N-acetyl-D-mannosamine 6-phosphate

1-oleoyl-2-lyso-glycerone phosphate

5,10-methenyltetrahydrofolate mono-L-glutamate

2-methoxy-6-(all-trans-octaprenyl)phenol

4-methylphenol

L-homocysteine

agmatine

cadaverine

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

nicotinamide

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

all-trans-retinyl palmitate

D-glucono-1,5-lactone

L-galactono-1,4-lactone

cis-dienelactone

trans-dienelactone

(E)-2-methylcrotonoyl-CoA

succinyl-CoA

2-methylacetoacetyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

isovaleryl-CoA

2-methylbutanoyl-CoA

isobutanoyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

3'-dephospho-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

malonyl-CoA

acetyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

decanoyl-CoA

octanoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

acetoacetyl-CoA

3-oxodecanoyl-CoA

FMNH₂

FMN

FAD

(S)-NADHX

(R)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

caldariellaquinol

ubiquinol-10

ubiquinol-7

ubiquinol-8

ubiquinol-9

menaquinol-9

menaquinol-8

demethylmenaquinol-9

demethylmenaquinol-8

3-demethylubiquinol-10

3-demethylubiquinol-7

3-demethylubiquinol-8

3-demethylubiquinol-9

caldariellaquinone

superoxide

monodehydroascorbate radical

hydroxyl radical

molybdopterin

coenzyme A

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

oxidized coenzyme F₄₂₀-0

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

L-ascorbate

nicotinate

riboflavin

thiamine

all-trans-retinol

pyridoxal

pyridoxine

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

menadione

(S)-1-pyrroline-5-carboxylate

adenine

2'-deoxyguanosine

2'-deoxyadenosine

2'-deoxyinosine

adenosine

xanthosine

inosine

guanosine

hypoxanthine

dAMP

dGMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

ADP

IDP

GDP

XMP

GMP

AMP

IMP

ATP

ITP

GTP

precorrin-3B

precorrin-7

precorrin-4

precorrin-5

precorrin-8x

precorrin-1

precorrin-6B

precorrin-6A

precorrin-2

precorrin-3A

sirohydrochlorin

hydantoin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

cyclic pyranopterin phosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

dUMP

uracil

CTP

dUDP

dTTP

cytosine

orotate

dTMP

dTDP

5,6-dihydrouracil

5,6-dihydrothymine

CDP

dCMP

dCDP

UDP

UTP

dCTP

dUTP

uridine

cytidine

thymine

UMP

CMP

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-α-D-glucuronate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-glucose

UDP-α-D-galactose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-α-D-glucose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

5-fluorouracil

isoguanine

preQ₁

(+)-dihydrokaempferol

(+)-taxifolin

(2R,3S,4S)-leucopelargonidin

(2R,3S,4S)-leucocyanidin

preQ₀

(indole-3-yl)acetonitrile

urate

4-tyrosol

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

3-methoxy-4-hydroxyphenylglycol

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

salicylate

4-aminobenzoate

L-α-amino-ε-keto-pimelate

L-serine

β-alanine

(R)-3-amino-2-methylpropanoate

L-glutamine

L-proline

L-leucine

L-alanine

glycine

L-glutamate

D-glutamate

L-lysine

L-arginine

L-histidine

L-phenylalanine

L-tryptophan

L-tyrosine

D-lysine

D-alanine

seleno-L-homocysteine

L-selenomethionine

L-aspartyl-4-phosphate

L-threonine 3-O-phosphate

3-phospho-L-serine

N-carbamoylglycine

N-acetyl-L-ornithine

N-acetyl-L-methionine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

L-citrulline

L-isoleucine

L-valine

O-succinyl-L-homoserine

S-adenosyl-L-homocysteine

S-sulfo-L-cysteine

L-glutamate-5-semialdehyde

L-aspartate 4-semialdehyde

L-homoserine

O-phospho-L-homoserine

L-ornithine

S-adenosyl-L-methionine

meso-diaminopimelate

L-selenocysteine

L-methionine

L-aspartate

L-asparagine

L-cysteine

L-threonine

L,L-diaminopimelate

L-cystathionine

acetate

(R)-pantoate

D-gluconate

aldehydo-D-glucuronate

aldehydo-D-galacturonate

chorismate

succinate

fumarate

(S)-malate

3-(carbamoylamino)-2-methylpropanoate

(2S,3S)-2-methylcitrate

cis-aconitate

D-threo-isocitrate

(S)-lactate

(R)-lactate

pyruvate

formate

butanoate

decanoate

octanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

2-oxoglutarate

glyoxylate

2-oxobutanoate

(15Z)-tetracosenoate

oleate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

phytenate

palmitate

diacetyl

glycolaldehyde

butan-1-al

1-propanal

isobutanal

acetaldehyde

phytenal

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

butan-1-ol

ethanol

propan-1-ol

methanol

phytol

glycerol

D-sorbitol

L-iditol

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

di-trans,octa-cis-undecaprenyl phosphate

geranyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-decaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-octaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

rhodopin

hydroxy-β-zeacarotene

β-cryptoxanthin

zeaxanthin

1'-hydroxy-γ-carotene

all-trans-lycopene

all-trans phytofluene

all-trans-ζ-carotene

all-trans neurosporene

all-trans-phytoene

15-cis-phytoene

plectaniaxanthin

myxol

β-carotene

β-zeacarotene

3-nonaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

1-(β-D ribofuranosyl)nicotinamide

keto-L-sorbose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

GDP-α-D-glucose

ADP-α-D-glucose

GDP-4-dehydro-6-deoxy-β-L-galactose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-β-L-fucose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

D-sedoheptulose 1,7-bisphosphate

4-phospho-D-erythronate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

maltotriose

maltotetraose

maltopentaose

maltoheptaose

maltohexaose

sucrose

aldehydo-L-galactonate

L-gulonate

8-oxo-GTP

8-oxo-dGTP

pppGpp

ppGpp

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

5'-deoxyadenosine

adenylo-succinate

5-fluorocytosine

2-hydroxy-dATP

5-hydroxy-CTP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

methionol

3-(methylsulfanyl)propanal

glutathione

thiocyanate

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

L-cysteate

3-sulfopyruvate

(2R)-3-sulfolactate

(2R)-phospho-3-sulfolactate

(R)-S-lactoylglutathione

sulfate

sulfite

selenite

selenate

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

chloride

phosphate

diphosphate

triphosphate

Fe³⁺

Fe²⁺

Zn²⁺

Co²⁺

Mg²⁺

ammonium

H⁺

2-iminobutanoate

2-iminosuccinate

cyanophycin primer-L-aspartate

cyanophycin primer

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine