an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

carbon monoxide

4-pyridoxolactone

M_LPS

core oligosaccharide-lipid A (E. coli K-12 core type)

nigerose

ADP-L-glycero-β-D-manno-heptose

(R)-4'-phosphopantothenoyl-L-cysteine

4'-phosphopantetheine

(R)-4-phosphopantoate

(R)-4'-phosphopantothenate

glutathione disulfide

3-dehydroshikimate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

imidazole acetaldehyde

4-imidazoleacetate

5-hydroxyindole acetate

3,4-dihydroxyphenylacetaldehyde

prop-2-ynal

propynoate

D-glucurono-6,3-lactone

dimethylsulfoniopropanoate

2-iminoacetate

porphobilinogen

preuroporphyrinogen

methylsalicylate

1,4-dihydroxy-2-naphthoate

5-carboxymethyl-2-hydroxymuconate

N-acetylglutamyl-phosphate

L-arginino-succinate

canavaninosuccinate

L-canavanine

shikimate

3-dehydroquinate

2-phosphoglycolate

glycolate

N-acetyl-L-glutamate 5-semialdehyde

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

O-ureido-L-homoserine

2-isopropylmaleate

citraconate

(2R,3S)-3-methylmalate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

(2S)-2-isopropylmalate

(S)-2-aceto-2-hydroxybutanoate

ADP-D-glycero-β-D-manno-heptose

2-(α-hydroxyethyl)thiamine diphosphate

carbonic acid

(R)-pantothenate

3-methyl-2-oxobutanoate

5-aminolevulinate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

prenyl diphosphate

N-acetyl-D-muramate 6-phosphate

prephenate

N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine

2-maleylacetate

γ-L-glutamyl 5-phosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

thiamine diphosphate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

(S)-4-amino-5-oxopentanoate

3-deoxy-D-manno-octulosonate 8-phosphate

β-D-ribosylnicotinate

N-succinyl-L,L-2,6-diaminopimelate

citrate

itaconate

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol

indole-3-glycol aldehyde

isobutanol

3-methylbutanol

3-methylbutanal

2-methylbutanol

2-methylbutanal

2-phenylethanol

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

1,4-dihydroxy-2-naphthoyl-CoA

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

3-deoxy-D-glycero-2,5-hexodiulosonate

hydrogen selenide

N-(2,3-dihydroxybenzoyl)-L-serine dimer

N-(2,3-dihydroxybenzoyl)-L-serine

2-oleoylglycerol

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

3-deoxy-D-arabino-heptulosonate 7-phosphate

(L-seryl)adenylate

(2,3-dihydroxybenzoyl)adenylate

norspermidine

salicyl alcohol

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

acetyl phosphate

ammonia

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

pimeloyl-CoA

8-amino-7-oxononanoate

7,8-diaminopelargonate

dethiobiotin

histidinal

imidazole acetol-phosphate

L-histidinol phosphate

histidinol

D-erythro-imidazole-glycerol-phosphate

crotonate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

(S)-2-amino-6-oxohexanoate

(S)-2-acetolactate

carboxynorspermidine

propane-1,3-diamine

carboxyspermidine

D-gluconate 6-phosphate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

(indol-3-yl)pyruvate

homogentisate

enol-phenylpyruvate

(2-hydroxyphenyl)acetate

4-maleyl-acetoacetate

4-fumaryl-acetoacetate

ethanolamine

5-amino-6-(D-ribitylamino)uracil

(S)-dihydroorotate

3-phenylpropanoate

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

(S)-4-hydroxy-2-oxopentanoate

chloroacetaldehyde

(2E)-2-hydroxypenta-2,4-dienoate

(3E)-2-oxopent-3-enoate

2-oxopent-4-enoate

3-(2,3-dihydroxyphenyl)propanoate

(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate

trimethylamine

trimethylamine N-oxide

hydrogen peroxide

H₂

selenophosphate

3-keto-β-D-galactose

α-ribazole

5,6-dimethylbenzimidazole

β-nicotinate D-ribonucleotide

α-ribazole 5'-phosphate

N-(2,3-dihydroxybenzoyl)-L-serine trimer

N¹-(5-phospho-β-D-ribosyl)glycinamide

formamide

4-imidazolone-5-propanoate

urocanate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

3-oxopropanoate

N-carbamoylputrescine

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

4-acetamidobutanal

4-acetamidobutanoate

γ-glutamyl-L-putrescine

(L-threonylcarbamoyl)adenylate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

2-dehydro-3-deoxy-D-gluconate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

anthranilate

N-(5-phosphoribosyl)-anthranilate

3-phosphooxypyruvate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-aminobutanoate

succinate semialdehyde

quinolinate

lipid X

3-deoxy-α-D-manno-2-octulosonate

lipid A disaccharide (E. coli)

lipid IV_A

thiamine phosphate

orotidine 5'-phosphate

DNA without lesion

5-phospho-β-D-ribosylamine

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

O-acetyl-L-serine

D-glycero-β-D-manno-heptose 1,7-bisphosphate

D-glycero-β-D-manno-heptose 1-phosphate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

S-formylglutathione

4-amino-4-deoxychorismate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-dehydropantoate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

xanthine

5-(methylsulfanyl)-α-D-ribose

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

5-deoxy-α-ribose 1-phosphate

(R)-1-amino-2-propanol O-2-phosphate

(R)-1-aminopropan-2-ol

carbamoyl phosphate

S-ribosyl-L-homocysteine

autoinducer 2

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate-enol-lactone

4-methyl-3-oxoadipate

L-selenocystathionine

phosphoenolpyruvate

glycerone phosphate

coproporphyrinogen III

4-phosphooxy-L-threonine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

isopentenyl diphosphate

CO₂

oxaloacetate

adenosine 3',5'-bisphosphate

3'-phosphoadenylyl-sulfate

H₂O

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

bisorganyltrisulfane

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

L-dehydro-ascorbate

5-hydroxyindole thiazolidine carboxylate

pyruvic oxime

4-oxoglutaramate

1-piperideine 6-carboxylate

α-D-galacturonate 1-phosphate

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran-borate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

4-(γ-L-glutamylamino)butanal

4-(γ-L-glutamylamino)butanoate

3-(3-hydroxyphenyl)propanoate

mercuriphenyl acetate

3'-ketosucrose

4-amino-2-methyl-5-pyrimidinemethanol

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

selenodiglutathione

glutathioselenol

α-D-glucosamine 1-phosphate

5-oxo-L-proline

(2Z)-2-(acetamidomethylene)succinate

3-hydroxy-2-methylpyridine-5-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

N⁵-carboxyaminoimidazole ribonucleotide

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

cyclohexane-1-carbonyl-CoA

cyclohexane-1-carboxylate

3-oxopimeloyl-CoA

3-hydroxypimeloyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

cyclohex-1,5-diene-1-carbonyl-CoA

isopropylamine

7-epicholate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

5-dehydro-4-deoxy-D-glucarate

oxalosuccinate

2-amino-3-carboxymuconate-6-semialdehyde

dialurate

(R)-mevalonate diphosphate

(R)-5-phosphomevalonate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

(indol-3-yl)acetamide

propionamide

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

pyrazine-2-carboxylate

(R)-mevalonate

propanoyl phosphate

nicotinate adenine dinucleotide

aminoacetone

6-phospho D-glucono-1,5-lactone

ectoine

(2S)-4-acetamido-2-aminobutanoate

5-methylcytosine

dihydroxyacetone

dimethyl sulfoxide

(lipoyl)adenylate

hydroxypyruvate

tartronate semialdehyde

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-androstene-3,17-dione

pregn-5-ene-3,20-dione-17-ol

pregn-5-ene-3,20-dione

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

N-Formyl-L-kynurenine

N-ethylmaleimide

N-ethylsuccinimide

2-O-(6-phospho-α-D-mannosyl)-D-glycerate

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

hydroxylamine

chloramphenicol

urea-1-carboxylate

hydroxyatrazine

N-isopropylammelide

ethylamine

acetoacetate

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

2,3-didehydroadipyl-CoA

4-hydroxy-2-nonenal

urea

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(2E,6E)-farnesol

(2E,6E)-farnesyl diphosphate

pristanate

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

2-iminobutanoate

2-iminosuccinate

2-iminopropanoate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

phenylacetate

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

adenosylcobalamin

cob(I)alamin

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosyl-cobinamide phosphate

adenosylcobyrate

adenosylcobinamide

cob(II)yrinate a,c-diamide

protoheme

hydrogen cyanide

N₂

uroporphyrinogen-III

protoporphyrin IX

protoporphyrinogen IX

uroporphyrinogen-I

coproporphyrinogen I

siroheme

Hg⁰

oxygen

hydrogen sulfide

2-chloroacetate

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

2,3-diphospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

1-oleoyl-2-lyso-glycerone phosphate

(R)-citramalate

dTDP-4-amino-4,6-dideoxy-α-D-galactose

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

superoxide

nitric oxide

monodehydroascorbate radical

hydroxyl radical

chloramphenicol 3-acetate

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

S-(hydroxymethyl)glutathione

3-dimethylsulfoniopropionaldehyde

methionol

3-(methylsulfanyl)propanal

S-methyl-L-methionine

dimethyl sulfide

glutathione

thiocyanate

methanethiol

S-sulfanylglutathione

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

(R)-S-lactoylglutathione

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

tetrathionate

tetrahydroxoborate

chloride

phosphate

triphosphate

diphosphate

Fe³⁺

Fe²⁺

Hg²⁺

H⁺

ammonium

glycine betaine

betaine aldehyde hydrate

betaine aldehyde

choline

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

agmatine

N¹-acetylspermidine

N-acetylputrescine

N¹-acetylspermine

putrescine

spermidine

spermine

sn-glycero-3-phosphocholine

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

fluoroacetaldehyde

fluoroacetate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

acetamide

isopenicillin N

(S)-(+)-allantoin

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

pyrazinamide

nicotinamide

ethene

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

cholest-4-en-3-one

(25S)-26-hydroxycholest-4-en-3-one

(25S)-26-oxocholest-4-en-3-one

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3-oxocholest-4,24-dien-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

pregnenolone

campest-4-en-3-one

progesterone

testosterone

campest-4-en-3β-ol

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

5α-androstane-3,17-dione

cholate

glycocholate

3-dehydrocholate

isocholate

3-β-hydroxyandrost-5-en-17-one

androsterone

cholesterol

cholest-5-en-3-one

17-α-hydroxypregnenolone

(+)-7-epi-jasmonate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

2-methylacetoacetyl-CoA

3'-dephospho-CoA

itaconyl-CoA

dihomo γ-linolenoyl-CoA

(+)-7-epi-jasmonoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

malonyl-CoA

acetyl-CoA

succinyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

2-methylbutanoyl-CoA

phenylacetyl-CoA

(E)-glutaconyl-CoA

glutaryl-CoA

trans-caffeoyl-CoA

trans-feruloyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

methylacrylyl-CoA

(2E,5Z)-tetradecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(3S)-hydroxyadipyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

isobutanoyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-octadec-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-oct-2-enoyl-CoA

(S)-malyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(Z)-15-tetracosenoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

propanoyl-CoA

butanoyl-CoA

decanoyl-CoA

octanoyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxooctadecanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

all-trans-retinyl palmitate

cis-dienelactone

trans-dienelactone

L-galactono-1,4-lactone

D-glucono-1,5-lactone

FAD

FMNH₂

FMN

FADH₂

(S)-NADHX

(R)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

ubiquinol-8

ubiquinol-10

ubiquinol-7

ubiquinol-9

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-8

3-demethylubiquinol-10

3-demethylubiquinol-7

3-demethylubiquinol-9

(R)-lipoate

molybdopterin

coenzyme A

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

nicotinate

riboflavin

thiamine

L-ascorbate

pyridoxal

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

4-pyridoxate

pyridoxine

pyridoxamine

all-trans-retinol

(S)-1-pyrroline-5-carboxylate

precorrin-2

precorrin-1

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydroneopterin 3'-triphosphate

cyclic pyranopterin phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

guanine

adenine

2'-deoxyadenosine

2'-deoxyguanosine

2'-deoxyinosine

inosine

guanosine

xanthosine

adenosine

hypoxanthine

dAMP

dGMP

dITP

dATP

dGTP

dIDP

dADP

dGDP

IDP

GDP

ADP

GMP

IMP

XMP

AMP

ITP

GTP

ATP

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

uridine 3'-monophosphate

cytidine-3'-monophosphate

dTMP

dUMP

orotate

dCMP

dTDP

dTTP

CDP

dCDP

dCTP

dUDP

dUTP

uracil

UDP

CTP

UTP

cytosine

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galactose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-glucose

UDP-α-D-galacturonate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-α-D-glucose

dTDP-4-acetamido-4,6-dideoxy-α-D-galactose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

5-fluorouracil

cytidine

uridine

2'-deoxycytidine

2'-deoxyuridine

thymidine

thymine

UMP

CMP

isoguanine

N¹-methyladenine

N3-methylcytosine

N¹-ethyladenine

preQ₁

baicalein

6,7-dehydrobaicalein

preQ₀

(indole-3-yl)acetonitrile

acrylonitrile

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

4-tyrosol

4-vinylguaiacol

salicylaldehyde

benzene

cyanuric acid

urate

atrazine

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

hydroquinone

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

4-methylphenol

3,4-dihydroxymandelate

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

2,3-dihydroxybenzoate

protocatechuate

enterobactin

vibriobactin

ferulate

3-hydroxy-trans-cinnamate

2,3-dihydroxy-trans-cinnamate

salicylate

trans-cinnamate

4-aminobenzoate

benzoate

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

L-serine

D-serine

β-alanine

(S)-3-amino-2-methylpropanoate

L-leucine

glycine

L-proline

L-glutamine

L-alanine

D-glutamate

L-glutamate

L-arginine

L-lysine

L-histidine

L-aspartate

L-tyrosine

L-asparagine

L-threonine

L-cysteine

L-phenylalanine

L-tryptophan

D-alanine

L-saccharopine

L-selenomethionine

seleno-L-homocysteine

L-aspartyl-4-phosphate

L-2-amino-3-oxobutanoate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-aspartate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-acetyl-L-methionine

N-carbamoyl-L-aspartate

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

3-phospho-L-serine

L-citrulline

L-valine

L-isoleucine

L-canaline

L-glutamate-5-semialdehyde

S-sulfo-L-cysteine

O-succinyl-L-homoserine

L-ornithine

O-phospho-L-homoserine

L-homoserine

L-aspartate 4-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-homocysteine

L-4-hydroxyglutamate semialdehyde

hypoglycin A

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-allo-threonine

L-methionine

L,L-diaminopimelate

L-cystathionine

L-isoglutamine

L-2,4-diaminobutanoate

(3E)-2-oxohex-3-enedioate

chorismate

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

(4S)-4-hydroxy-2-oxoglutarate

fumarate

succinate

(S)-malate

D-glucarate

D-galactarate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

cis-aconitate

(2S,3S)-2-methylcitrate

(2R,3S)-2-methylisocitrate

cis-2-methylaconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

(S)-lactate

(R)-lactate

pyruvate

acetate

formate

propanoate

butanoate

decanoate

octanoate

(2E,6E)-farnesoate

3-oxoadipate

(15Z)-tetracosenoate

oleate

(3E,5Z)-tetradecadienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

di-homo-γ-linolenate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

apo-4'-lycopenoate

phytenate

palmitate

stearate

1-palmitoyl-2-linoleoyl-phosphatidylcholine

1-linoleoyl-sn-glycero-3-phosphocholine

D-gluconate

(R)-pantoate

D-tagaturonate

aldehydo-D-glucuronate

aldehydo-D-galacturonate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

2-oxoglutarate

methylglyoxal

diacetyl

(R)-acetoin

(2E,6E)-farnesal

glycolaldehyde

1-propanal

isobutanal

formaldehyde

1-octanal

acetaldehyde

butan-1-al

(R)-lactaldehyde

(S)-lactaldehyde

phytenal

D-glyceraldehyde

L-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-ribopyranose

α-D-galactopyranose

β-D-galactopyranose

α-L-rhamnopyranose

β-L-rhamnopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

propan-1-ol

ethanol

methanol

butan-1-ol

phytol

glycerol

D-arabinitol

galactitol

D-mannitol 1-phosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

dioleoyl phosphatidate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

geranyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-octaprenyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

apo-4'-lycopenal

3-oxo-24-ethyl-26-al-cholest-4-ene

3-oxo-24-ethyl-cholest-4-en-26-oate

3,24-dioxo-cholest-4-en-26-oate

3-oxo-24-(isopropanoyl)-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-ethyl-cholest-4-en-26-oyl-CoA

3-oxo-24-ethyl-26-hydroxy-cholest-4-ene

3-oxo-24-ethyl-cholest-4-ene

sitosterol

3-oxo-24-ethyl-cholest-5-ene

3-nonaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

galactosyl-glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

α-Kdo-(2→6)-lipid IV_A

4-O-phospho-α-Kdo-(2→6)-lipid IV_A

heptosyl-Kdo₂-lipid A

(heptosyl)₂-Kdo₂-lipid A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

galactosyl-(glucosyl)₃-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₂-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₂-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₂-Kdo₂-lipid A

betanidin

betanidin quinone

ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

maltotriose

raffinose

stachyose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

4-(4-deoxy-α-D-galact-4-enuronosyl)-D-galacturonate

melibiose

sucrose

allolactose

α-lactose

colanic acid

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

β-D-fructofuranose

keto-L-rhamnulose

D-xylulose

L-ribulose

D-ribulose

3'-ketolactose

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3-dehydro-D-glucopyranose

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

N-monoacetylchitobiose 6'-phosphate

N,N'-diacetylchitobiose 6'-phosphate

sucrose 6^F-phosphate

β-D-cellobiose 6'-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

ADP-α-D-glucose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

D-tagatofuranose 1,6-bisphosphate

β-D-fructose 1,6-bisphosphate

arbutin-6-phosphate

salicin 6-phosphate

D-tagatofuranose 6-phosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

L-rhamnulose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

methyl β-D-glucoside 6-phosphate

aldehydo-L-galactonate

L-gulonate

D-altronate

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

guanosine 3'-monophosphate

adenosine 3'-monophosphate

pppGpp

ppGpp

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

adenylo-succinate

cyclic-GMP

5'-deoxyadenosine

8-oxo-GTP

8-oxo-dGTP

5-fluorocytosine

5-hydroxy-CTP

2-hydroxy-dATP

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

cyclic di-3',5'-guanylate

hypoglycin B

hippurate