an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
L-dehydro-ascorbate
α-D-galacturonate 1-phosphate
L-xylo-hex-3-ulono-1,4-lactone
L-gulono-1,4-lactone
pseudouridine
(S)-5-amino-3-oxohexanoate
(3S,5S)-3,5-diaminohexanoate
N5-carboxyaminoimidazole ribonucleotide
selenodiglutathione
glutathioselenol
2-amino-3-carboxymuconate-6-semialdehyde
4-amino-2-methyl-5-pyrimidinemethanol
3-oxo-5,6-didehydrosuberyl-CoA semialdehyde
3-oxo-5,6-didehydrosuberyl-CoA
2-oxepin-2(3H)-ylideneacetyl-CoA
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA
(R)-mevalonate diphosphate
(R)-5-phosphomevalonate
propane-1,3-diamine
H2
carbon monoxide
core oligosaccharide-lipid A (E. coli K-12 core type)
dialurate
5-amino-6-(5-phospho-D-ribitylamino)uracil
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate
(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA
5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA
(2Z,4Z)-2-hydroxyhexa-2,4-dienoate
(S)-4-hydroxy-2-oxohexanoate
(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate
N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine
2-maleylacetate
itaconate
(L-seryl)adenylate
N-(2,3-dihydroxybenzoyl)-L-serine trimer
3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate
3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA
N-ethylmaleimide
N-ethylsuccinimide
3-keto-L-gulonate 6-phosphate
3-β-hydroxyandrost-5-en-17-one 3-sulfate
estrone 3-sulfate
(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate
1-deoxy-L-glycero-tetrulose 4-phosphate
(lipoyl)adenylate
3-oxopropanoate
methylamine
N-ethylglycine
ethylamine
6-amino-2-oxohexanoate
(R)-1-amino-2-propanol O-2-phosphate
(R)-1-aminopropan-2-ol
D-glycero-β-D-manno-heptose 1,7-bisphosphate
D-glycero-β-D-manno-heptose 1-phosphate
2-iminoacetate
(L-threonylcarbamoyl)adenylate
1,4-dihydroxy-2-naphthoate
luteolin 7-O-[β-D-glucosyluronate-(1,2)-β-D-glucosiduronate]-4'-O-β-D-glucosiduronate
luteolin 7-O-β-D-diglucuronide
luteolin 7-O-β-D-glucuronide
coenzyme F390-A
glutathionylspermidine
α-D-glucopyranosyl-diphosphoundecaprenol
N,N-dimethyl-1,4-phenylenediamine
acrylamide
acrylate
4-guanidinobutyramide
4-guanidinobutanoate
(indol-3-yl)acetamide
propionamide
2-oxopent-4-enoate
(S)-4-hydroxy-2-oxopentanoate
D-erythro-imidazole-glycerol-phosphate
propanoyl phosphate
carboxynorspermidine
norspermidine
DNA without lesion
(R)-mevalonate
urea-1-carboxylate
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA
3-hydroxypropanoate
acetoacetate
4-hydroxy-2-nonenal
5-methylcytosine
(L-aspartyl)adenylate
(2,3-dihydroxybenzoyl)adenylate
5-dehydro-D-gluconate
2-dehydro-3-deoxy-D-gluconate
4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine 4-sulfate
2-deoxygluconate
3-dehydro-2-deoxy-D-gluconate
3-keto-β-D-galactose
(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate
4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine
aminoacetone
(S)-dihydroorotate
nicotinate adenine dinucleotide
S-adenosyl 3-(methylsulfanyl)propylamine
tartronate semialdehyde
ferric aerobactin
oxalate
γ-L-glutamyl 5-phosphate
methylsalicylate
S-formylglutathione
(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate
S-methyl-5'-thioadenosine
5-(methylsulfanyl)-α-D-ribose
(2S)-2-isopropyl-3-oxosuccinate
3-ethylmalate
2-oxovalerate
(2S)-2-isopropylmalate
2-isopropylmaleate
(2R,3S)-3-isopropylmalate
(2S)-2-amino-3-oxo-4-phosphooxybutanoate
3-deoxy-D-manno-octulosonate 8-phosphate
adenosine 5'-phosphosulfate
adenosine 5'-phosphoselenate
ADP-D-glycero-β-D-manno-heptose
ADP-L-glycero-β-D-manno-heptose
(R)-4'-phosphopantothenoyl-L-cysteine
4'-phosphopantetheine
4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine
prephenate
4-methyl-2-oxopentanoate
(S)-3-methyl-2-oxopentanoate
(R)-2,3-dihydroxy-3-methylpentanoate
(S)-2-aceto-2-hydroxybutanoate
(S)-2-acetolactate
2-dehydro-3-deoxy-D-gluconate 6-phosphate
glutathione disulfide
porphobilinogen
preuroporphyrinogen
(R)-4'-phosphopantothenate
coproporphyrinogen III
3-dehydroshikimate
L-β-lysine
prenyl diphosphate
2-phosphoglycolate
glycolate
N2-succinyl-L-ornithine
N2-succinyl-L-arginine
N2-succinyl-L-glutamate 5-semialdehyde
5-carboxymethyl-2-hydroxymuconate
N-acetyl-L-glutamate 5-semialdehyde
N-acetylglutamyl-phosphate
O-ureido-L-homoserine
canavaninosuccinate
L-canavanine
L-arginino-succinate
shikimate
3-dehydroquinate
3'-phosphoadenylyl-sulfate
hydroxypyruvate
carbamoyl phosphate
salicyl alcohol
3-amino-1-hydroxyacetone 1-phosphate
adenosine 3',5'-bisphosphate
2-C-methyl-D-erythritol-2,4-cyclodiphosphate
S-ribosyl-L-homocysteine
autoinducer 2
quinolinate
2-(α-hydroxyethyl)thiamine diphosphate
thiamine diphosphate
dihydrolipoamide
S-acetyldihydrolipoamide
carbonic acid
(R)-pantothenate
3-methyl-2-oxobutanoate
citrate
N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate
1,6-anhydro-N-acetyl-β-muramate
cis-coumarinic acid-β-D-glucoside
scopolin
4-hydroxybenzaldehyde
4-methylumbelliferyl glucoside
(S)-4-amino-5-oxopentanoate
5-aminolevulinate
α-D-glucosamine 1-phosphate
xanthine
(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA
(S)-2,3,4,5-tetrahydrodipicolinate
N-succinyl-2-amino-6-ketopimelate
2-dehydropantoate
isopentenyl diphosphate
2-C-methyl-D-erythritol 4-phosphate
lipid X
N1-(5-phospho-β-D-ribosyl)glycinamide
N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide
2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine
5-amino-1-(5-phospho-β-D-ribosyl)imidazole
arsenite
N-succinyl-L,L-2,6-diaminopimelate
3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA
2,3-didehydroadipyl-CoA
3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA
(E)-4-coumaroyl-CoA
5-phospho-β-D-ribosylamine
thiamine phosphate
lipid A disaccharide (E. coli)
lipid IVA
3-deoxy-α-D-manno-2-octulosonate
oxalosuccinate
shikimate 3-phosphate
5-enolpyruvoyl-shikimate 3-phosphate
dimethylsulfoniopropanoate
4-acetamidobutanal
4-acetamidobutanoate
D-glucurono-6,3-lactone
prop-2-ynal
propynoate
3,4-dihydroxyphenylacetaldehyde
5-hydroxyindole acetate
imidazole acetaldehyde
4-imidazoleacetate
acetyl phosphate
urea
urocanate
formamide
4-imidazolone-5-propanoate
2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
5-amino-6-(5-phospho-D-ribosylamino)uracil
5-amino-6-(D-ribitylamino)uracil
3-deoxy-D-arabino-heptulosonate 7-phosphate
D-gluconate 6-phosphate
6-phospho D-glucono-1,5-lactone
ethanolamine
4-fumaryl-acetoacetate
4-maleyl-acetoacetate
(2-hydroxyphenyl)acetate
homogentisate
β-D-ribosylnicotinate
N2-succinylglutamate
α-ribazole
5,6-dimethylbenzimidazole
β-nicotinate D-ribonucleotide
α-ribazole 5'-phosphate
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
oxaloacetate
(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate
4-phosphooxy-L-threonine
3-phosphooxypyruvate
4-aminobutanoate
L-selenocystathionine
trimethylamine N-oxide
trimethylamine
imidazole acetol-phosphate
L-histidinol phosphate
histidinal
histidinol
5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
pimeloyl-CoA
dethiobiotin
8-amino-7-oxononanoate
S-adenosyl-4-methylsulfanyl-2-oxobutanoate
7,8-diaminopelargonate
orotidine 5'-phosphate
phosphoenolpyruvate
N-acetyl-D-muramate 6-phosphate
D-galactosamine-6-phosphate
N-acetyl-D-galactosamine 6-phosphate
glycerone phosphate
2-amino-2-deoxy-D-gluconate 6-phosphate
4-amino-4-deoxychorismate
pseudouridine 5'-phosphate
ammonia
3-demethylubiquinol-6
N-(5-phosphoribosyl)-anthranilate
anthranilate
hydrogen peroxide
2-phenylethanol
2-methylbutanol
2-methylbutanal
3-methylbutanol
3-methylbutanal
isobutanol
indole-3-glycol
indole-3-glycol aldehyde
3-methoxy-4-hydroxyphenylglycolaldehyde
5-hydroxytryptophol
5-hydroxyindole acetaldehyde
hydrogen selenide
O-acetyl-L-serine
2-succinylbenzoate
4-(2'-carboxyphenyl)-4-oxobutyryl-CoA
1,4-dihydroxy-2-naphthoyl-CoA
H2O
(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate
2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate
succinate semialdehyde
CO2
isochorismate
2-carboxy-L-threo-pentonate
2-carboxy-L-xylonolactone
(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
bisorganyltrisulfane
2,3-dioxo-L-gulonate
cyclic- 3,4-O-oxalyl-L-threonate
enol-phenylpyruvate
(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
5-hydroxyindole thiazolidine carboxylate
dehydroascorbate (bicyclic form)
cyclic-2,3-O-oxalyl-L-threonate
4-oxoglutaramate
1-piperideine-2-carboxylate
5-aminopentanoate
(4-hydroxyphenyl)acetate
(2E,6E)-farnesyl diphosphate
pristanate
N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine
N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine
L-alanyl-γ-D-glutamyl-meso-diaminopimelate
N-acetyl-L-glutaminyl-L-glutamine
N-acetyl-L-glutaminyl-L-glutamine amide
γ-L-glutamyl-L-cysteine
D-alanyl-D-alanine
L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine
2-iminosuccinate
2-iminobutanoate
2-iminopropanoate
4-methylphenol
L-homocysteine
(glutathion-S-yl)-4-hydroxy-2-nonenal
DNA with lesion
phenylacetate
ethylphosphate
phosphonoacetaldehyde
(2-aminoethyl)phosphonate
adenosylcobalamin
cob(I)alamin
cob(II)yrinate c-monoamide
cobalt-factor III
cobalt-precorrin-3
cobalt-sirohydrochlorin
cobalt-precorrin-7
cobalt-precorrin-8
cobalt-precorrin-6B
cobalt-precorrin-5B
cobalt-precorrin-6A
cobalt-precorrin-4
cobalt-precorrin-5A
cobyrinate
131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester
3,8-divinyl protochlorophyllide a
magnesium-protoporphyrin IX 13-monomethyl ester
131-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester
chlorophyllide a
protochlorophyllide a
cob(II)yrinate a,c-diamide
Mg-protoporphyrin
adenosylcobyrate
hemin
adenosylcobalamin 5'-phosphate
adenosyl-cobinamide phosphate
adenosylcobinamide-GDP
cob(I)yrinate a,c-diamide
adenosyl-cob(III)yrinate a,c-diamide
cob(I)inamide
adenosylcobinamide
protoheme
hydrogen cyanide
protoporphyrin IX
protoporphyrinogen IX
uroporphyrinogen-III
uroporphyrinogen-I
coproporphyrinogen I
siroheme
oxygen
hydrogen sulfide
sn-glycerol 3-phosphate
2,3-diphospho-D-glycerate
(R)-glycerate
3-phospho-D-glyceroyl-phosphate
2-phospho-D-glycerate
3-phospho-D-glycerate
4-dimethylaminophenylazobenzene
(2R)-2,3-dihydroxy-3-methylbutanoate
α-D-glucosamine 6-phosphate
N-acetyl-D-mannosamine 6-phosphate
S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine
1-oleoyl-2-lyso-glycerone phosphate
CMP-N-acetyl-β-neuraminate
(S)-methylmalonate-semialdehyde
(R)-methylmalonate-semialdehyde
5,10-methenyltetrahydrofolate mono-L-glutamate
(S)-3-hydroxy-isobutanoate
2-methoxy-6-(all-trans-octaprenyl)phenol
(S)-2-hydroxyglutarate
superoxide
hydroxyl radical
nitric oxide
monodehydroascorbate radical
1-chloro-2,4-dinitrobenzene
2,4-dinitrophenyl-S-glutathione
N-acetyl-β-neuraminate
S-(hydroxymethyl)glutathione
dimethyl sulfide
3-dimethylsulfoniopropionaldehyde
methionol
3-(methylsulfanyl)propanal
glutathione
thiocyanate
S-sulfanylglutathione
5-(2-hydroxyethyl)-4-methylthiazole
4-methyl-5-(2-phosphooxyethyl)thiazole
2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate
2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate
L-cysteate
3-sulfopyruvate
N-acetyl-D-galactosamine 6-O-sulfate
(R)-S-lactoylglutathione
trimethyl sulfonium
tungstate
sulfate
sulfite
selenite
selenate
thiosulfate
OH-
nitrite
nitrate
hydrogensulfite
hydrogencarbonate
molybdate
chloride
phosphonate
phosphate
triphosphate
diphosphate
Fe3+
ammonium
H+
K+
Na+
Cu2+
Fe2+
Cd2+
Ni2+
Zn2+
Mg2+
Co2+
glycine betaine
betaine aldehyde hydrate
betaine aldehyde
choline
aniline
(2Z)-2-aminobut-2-enoate
2-aminoprop-2-enoate
agmatine
spermidine
cadaverine
putrescine
sn-glycero-3-phosphocholine
sn-glycero-3-phosphoethanolamine
glycerophosphoserine
glycerophosphoglycerol
1-oleoyl-2-palmitoyl-phosphatidylglycerol
fluoroacetaldehyde
fluoroacetate
5'-deoxy-5'-fluoroadenosine
5-fluoro-5-deoxy-D-ribose 1-phosphate
(S)-2-chloropropanoate
5'-chloro-5'-deoxyadenosine
5-chloro-5-deoxyribose 1-phosphate
acetamide
isopenicillin N
5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide
5-amino-4-imidazolecarboxyamide
1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
phosphoribulosylformimino-AICAR-phosphate
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
nicotinamide
(25S)-3-oxocholest-4-en-26-oate
(25S)-3-oxocholest-4-en-26-oyl-CoA
24-hydroxy-3-oxocholest-4-en-26-oyl-CoA
3,24-dioxocholest-4-en-26-oyl-CoA
3-oxo-4-pregnene-20-carboxyl-CoA
3,22-dioxochol-4-en-24-oyl-CoA
estrone
3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione
3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione
9α-hydroxyandrosta-1,4-diene-3,17-dione
androsta-1,4-diene-3,17-dione
androst-4-ene-3,17-dione
3-β-hydroxyandrost-5-en-17-one
(+)-7-epi-jasmonate
methyl (indol-3-yl)acetate
(indol-3-yl)acetate
(S)-3-aminobutanoyl-CoA
2-methylacetoacetyl-CoA
phenylacetyl-CoA
itaconyl-CoA
CoA-disulfide
dihomo γ-linolenoyl-CoA
isovaleryl-CoA
isobutanoyl-CoA
3-hydroxypropanoyl-CoA
2-methylbutanoyl-CoA
3-methylcrotonyl-CoA
3-methylglutaconyl-CoA
(S)-3-hydroxy-3-methylglutaryl-CoA
3'-dephospho-CoA
linoleoyl-CoA
α-linolenoyl-CoA
(5E)-3-oxo-dodec-5-enoyl-CoA
(3E)-dec-3-enoyl-CoA
5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA
(3Z,5E)-dodeca-3,5-dienoyl-CoA
4-trans-3-oxo-undecenoyl-CoA
2-trans-nonenoyl-CoA
6-trans-3-oxo-tridecenoyl-CoA
4-trans-undecenoyl-CoA
6-cis, 3-oxo-tridecenoyl-CoA
4-cis-undecenoyl-CoA
4-hydroxybenzoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA
3-hydroxyisovaleryl-CoA
(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA
(E)-2-methylcrotonoyl-CoA
(3S)-hydroxyadipyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA
methylacrylyl-CoA
acetyl-CoA
succinyl-CoA
(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA
(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA
malonyl-CoA
(+)-7-epi-jasmonoyl-CoA
2-trans, 4-trans-undecadienoyl-CoA
2-trans, 4-cis-undecadienoyl-CoA
(3E)-undec-3-enoyl-CoA
(2E,4E)-tetradeca-2,4-dienoyl-CoA
(3E)-tetradec-3-enoyl-CoA
oxalyl-CoA
formyl-CoA
crotonyl-CoA
phytenoyl-CoA
(2E)-oct-2-enoyl-CoA
(2E)-dec-2-enoyl-CoA
trans-Δ2, cis-Δ4-decadienoyl-CoA
(3Z)-dodec-3-enoyl-CoA
oleoyl-CoA
(S)-3-hydroxybutanoyl-CoA
(S)-3-hydroxyhexanoyl-CoA
(S)-3-hydroxyoctanoyl-CoA
(S)-3-hydroxydecanoyl-CoA
(3R)-3-hydroxybutanoyl-CoA
(3R)-3-hydroxypentanoyl-CoA
(3R)-3-hydroxyoctadecanoyl-CoA
(Z)-15-tetracosenoyl-CoA
butanoyl-CoA
propanoyl-CoA
hexanoyl-CoA
decanoyl-CoA
lauroyl-CoA
octanoyl-CoA
stearoyl-CoA
palmitoyl-CoA
pristanoyl-CoA
hexadecanedioyl-CoA
3-oxoadipyl-CoA
acetoacetyl-CoA
3-oxopentanoyl-CoA
3-oxooctanoyl-CoA
3-oxododecanoyl-CoA
3-oxodecanoyl-CoA
3-oxohexanoyl-CoA
3-oxooctadecanoyl-CoA
3-oxo-(5Z)-tetradecenoyl-CoA
3-oxo-myristoyl-CoA
(S)-3-hydroxy-isobutanoyl-CoA
all-trans-retinyl palmitate
L-galactono-1,4-lactone
cis-dienelactone
trans-dienelactone
tributyrin
1,2-dibutyrin
FAD
FADH2
FMNH2
FMN
(S)-NADHX
(R)-NADHX
NADPH
NADH
NADP+
NAD+
ubiquinol-10
ubiquinol-7
ubiquinol-6
ubiquinol-8
ubiquinol-9
menaquinol-8
demethylmenaquinol-8
3-demethylubiquinol-10
3-demethylubiquinol-7
3-demethylubiquinol-8
3-demethylubiquinol-9
(R)-lipoate
molybdopterin
coenzyme A
MoO2-molybdopterin cofactor
oxidized coenzyme F420-2
7,8-dihydrofolate monoglutamate
N10-formyldihydrofolate
5,6,7,8-tetrahydrofolate
tetrahydropteroyl tri-L-glutamate
(6S)-5-formyl-tetrahydrofolate mono-L-glutamate
5,10-methylenetetrahydropteroyl mono-L-glutamate
10-formyl-tetrahydrofolate mono-L-glutamate
5-methyltetrahydropteroyl mono-L-glutamate
5-methyltetrahydropteroyl tri-L-glutamate
thiamine
riboflavin
nicotinate
L-ascorbate
pyridoxal
pyridoxal 5'-phosphate
pyridoxamine
pyridoxamine 5'-phosphate
pyridoxine
pyridoxine 5'-phosphate
all-trans-retinol
(S)-1-pyrroline-5-carboxylate
precorrin-1
precorrin-2
sirohydrochlorin
6,7-dimethyl-8-(1-D-ribityl)lumazine
reduced riboflavin
7,8-dihydroneopterin 3'-phosphate
molybdopterin adenine dinucleotide
cyclic pyranopterin phosphate
7,8-dihydroneopterin 3'-triphosphate
7,8-dihydromonapterin
7,8-dihydroneopterin
6-(hydroxymethyl)-7,8-dihydropterin
(7,8-dihydropterin-6-yl)methyl diphosphate
7,8-dihydropteroate
guanine
adenine
2'-deoxyinosine
2'-deoxyguanosine
2'-deoxyadenosine
xanthosine
adenosine
inosine
guanosine
hypoxanthine
dAMP
dGMP
dITP
dGTP
dATP
dIDP
dGDP
dADP
IDP
GDP
ADP
XMP
IMP
GMP
AMP
ITP
GTP
ATP
uridine 2'3'-cyclic monophosphate
cytidine 2',3'-cyclic monophosphate
cytosine
dUTP
dTTP
dCTP
cytidine-3'-monophosphate
uridine 3'-monophosphate
orotate
UTP
CTP
dUMP
dCMP
dTMP
dTDP
uracil
dUDP
UDP
dCDP
CDP
UDP-α-D-galacturonate
UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine
UDP-N-acetyl-α-D-muramate
UDP-N-acetyl-α-D-muramoyl-L-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate
UDP-N-acetyl-α-D-glucosamine-enolpyruvate
UDP-α-D-glucuronate
UDP-N-acetyl-α-D-mannosamine
UDP-α-D-glucose
UDP-α-D-galactose
UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine
UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-mannosaminuronate
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate
UDP-N-acetyl-α-D-glucosamine
dTDP-α-D-glucose
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
5-fluorouracil
uridine
cytidine
2'-deoxycytidine
thymidine
2'-deoxyuridine
thymine
UMP
CMP
isoguanine
N1-methyladenine
N3-methylcytosine
N1-ethyladenine
preQ1
luteolin
scopoletin
coumarin
4-methylumbelliferone
(indole-3-yl)acetonitrile
acrylonitrile
preQ0
neolinustatin
lotaustralin
linustatin
linamarin
taxiphyllin
2-hydroxy-2-methylpropanenitrile
(2R)-2-hydroxy-2-methylbutanenitrile
salicylaldehyde
urate
salicyl-6-hydroxy-2-cyclohexene-on-oyl
6-hydroxy-2-cyclohexen-one-carboxylate
4-hydroxybenzoate
4-tyrosol
vanillyl mandelate
3-methoxy-4-hydroxyphenylglycol
benzaldehyde
phenylacetaldehyde
(4-hydroxyphenyl)acetaldehyde
(indol-3-yl)acetaldehyde
indole
(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate
hydroquinone
6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol
2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol
2,3-dihydroxybenzoate
catechol
3,4-dihydroxyphenylacetate
3,4-dihydroxymandelate
3,4-dihydroxyphenylglycol
3,4-dihydroxyphenylglycolaldehyde
vibriobactin
enterobactin
coumarinate
salicylate
4-aminobenzoate
benzoate
L-2-aminoadipate
L-α-amino-ε-keto-pimelate
D-serine
L-serine
β-alanine
(S)-3-amino-2-methylpropanoate
L-leucine
L-proline
glycine
L-alanine
L-glutamine
D-glutamate
L-glutamate
L-lysine
L-arginine
L-histidine
L-aspartate
L-tyrosine
L-threonine
L-asparagine
L-cysteine
L-phenylalanine
L-tryptophan
D-proline
D-ornithine
D-lysine
D-alanine
L-2-amino-3-oxobutanoate
L-selenomethionine
seleno-L-homocysteine
L-aspartyl-4-phosphate
3-phospho-L-serine
sarcosine
N-formyl-L-glutamate
formyl-L-isoglutamine
N-formimino-L-glutamate
N-acetyl-L-citrulline
N-acetyl-L-ornithine
N-acetyl-L-methionine
N-acetyl-L-glutamate
N-carbamoyl-L-aspartate
L-citrulline
L-isoleucine
L-valine
L-canaline
L-glutamate-5-semialdehyde
O-phospho-L-homoserine
L-ornithine
1-aminocyclopropane-1-carboxylate
L-homoserine
O-succinyl-L-homoserine
S-adenosyl-L-methionine
S-adenosyl-L-homocysteine
L-aspartate 4-semialdehyde
S-sulfo-L-cysteine
L-4-hydroxyglutamate semialdehyde
S-(4-hydroxy-nonenal-3-yl)-L-cysteine
meso-diaminopimelate
L-selenocysteine
L-methionine
L-2,4-diaminobutanoate
L,L-diaminopimelate
L-cystathionine
L-isoglutamine
chorismate
succinate
fumarate
(S)-malate
D-glucarate
(3E,5R)-5-carboxy-2-oxohept-3-enedioate
cis-aconitate
cis-2-methylaconitate
(2S,3S)-2-methylcitrate
(2R,3S)-2-methylisocitrate
D-threo-isocitrate
(S)-lactate
(R)-lactate
pyruvate
acetate
formate
propanoate
butanoate
decanoate
octanoate
(2E,6E)-farnesoate
1-palmitoyl-2-linoleoyl-phosphatidylcholine
1-linoleoyl-sn-glycero-3-phosphocholine
(15Z)-tetracosenoate
oleate
(3E,5Z)-tetradecadienoate
di-homo-γ-linolenate
linoleate
(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate
α-linolenate
phytenate
stearate
palmitate
D-mannonate
D-gluconate
(R)-pantoate
D-tagaturonate
aldehydo-D-glucuronate
β-D-glucuronate
aldehydo-D-galacturonate
3-phenyl-2-oxopropanoate
3-(4-hydroxyphenyl)pyruvate
glyoxylate
2-oxobutanoate
2-oxoglutarate
a coenzyme-A group
methylglyoxal
diacetyl
glycolaldehyde
(2E,6E)-farnesal
butan-1-al
1-octanal
formaldehyde
isobutanal
1-propanal
acetaldehyde
(S)-lactaldehyde
phytenal
D-glyceraldehyde
α-D-glucopyranose
β-D-glucopyranose
β-D-ribopyranose
α-D-galactopyranose
β-D-galactopyranose
aldehydo-D-ribose
β-D-ribofuranose
α-D-ribofuranose
butan-1-ol
methanol
propan-1-ol
ethanol
phytol
glycerol
D-mannitol 1-phosphate
myo-inositol
scyllo-inosose
D-myo-inositol (1,4,5)-trisphosphate
D-myo-inositol (1,3,4)-trisphosphate
D-myo-inositol (1,3,4,5)-tetrakisphosphate
D-myo-inositol (1,4)-bisphosphate
1D-myo-inositol 2-monophosphate
1D-myo-inositol 1-monophosphate
1D-myo-inositol 6-monophosphate
1D-myo-inositol 5-monophosphate
1D-myo-inositol 4-monophosphate
1D-myo-inositol 3-monophosphate
(3E,5Z)-tetradeca-3,5-dienoyl-CoA
1-(oleoyl)-sn-glycero-3-phosphoethanolamine
1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate
1-oleoyl-sn-glycerol 3-phosphate
dioleoyl phosphatidate
phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)
trans,octacis-decaprenyl phosphate
di-trans,octa-cis-undecaprenyl phosphate
all-trans-octaprenyl diphosphate
mono-trans,octa-cis-decaprenyl diphosphate
di-trans,octa-cis-undecaprenyl diphosphate
3-octaprenyl-4-hydroxybenzoate
galactosyl-glucosyl-(heptosyl)3-Kdo2-lipid A-bisphosphate
galactosyl-(glucosyl)3-(heptosyl)3-Kdo2-lipid A-bisphosphate
galactosyl-(glucosyl)2-(heptosyl)3-Kdo2-lipid A-bisphosphate
glucosyl-(heptosyl)3-Kdo2-lipid A-bisphosphate
glucosyl-(heptosyl)3-Kdo2-lipid A-phosphate
glucosyl-(heptosyl)2-Kdo2-lipid A-phosphate
glucosyl-(heptosyl)2-Kdo2-lipid A
(heptosyl)2-Kdo2-lipid A
α-Kdo-(2→6)-lipid IVA
4-O-phospho-α-Kdo-(2→6)-lipid IVA
α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A
heptosyl-Kdo2-lipid A
heptosyl-Kdo2-lipid IVA
α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA
ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex
1-(β-D ribofuranosyl)nicotinamide
5-dehydro-4-deoxy-D-glucuronate
XLLG xyloglucan oligosaccharide
XLXG xyloglucan oligosaccharide
XXLG xyloglucan oligosaccharide
XXXG xyloglucan oligosaccharide
raffinose
maltotriose
stachyose
maltotetraose
maltoheptaose
maltohexaose
maltopentaose
α-maltose
4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine
allolactose
4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl--D-galactosamine 6-sulfate
melibiose
sucrose
α-lactose
β-D-cellobiose
N-acetyl-α-D-muramoyl-L-alanine(1-)
N-acetylmuramate
N-acetyl-α-D-glucosamine 1-phosphate
N-acetyl-α-D-mannosamine
N-acetyl-β-D-mannosamine
N-acetyl-β-D-galactosamine
N-acetyl-β-D-glucosamine
N-acetyl-α-D-glucosamine
β-D-fructofuranose
3'-ketolactose
decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide
a peptidoglycan dimer (mycobacteria)
decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine
a peptidoglycan dimer (E. faecium, tetrapeptide)
a peptidoglycan dimer (E. faeciums)
a peptidoglycan dimer (S. aureus)
a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)
a peptidoglycan with D,D cross-link (S. aureus)
a peptidoglycan with D,D cross-links (mycobacteria)
a peptidoglycan with L,D cross-links (mycobacteria)
a peptidoglycan dimer (meso-diaminopimelate containing)
a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala
D-ribulose-1,5-bisphosphate
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine
undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
sucrose 6F-phosphate
N-monoacetylchitobiose 6'-phosphate
N,N'-diacetylchitobiose 6'-phosphate
β-D-cellobiose 6'-phosphate
CMP-3-deoxy-β-D-manno-octulosonate
ADP-α-D-glucose
GDP-α-D-glucose
GDP-α-D-mannose
D-glyceraldehyde 3-phosphate
α-D-glucopyranose 1-phosphate
D-sedoheptulose 7-phosphate
4-phospho-D-erythronate
D-erythrose 4-phosphate
5-phospho-α-D-ribose 1-diphosphate
1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate
D-tagatofuranose 1,6-bisphosphate
β-D-fructose 1,6-bisphosphate
salicin 6-phosphate
arbutin-6-phosphate
D-tagatofuranose 6-phosphate
β-D-fructofuranose 6-phosphate
L-ascorbate 6-phosphate
D-fructose 6-phosphate
β-D-mannopyranose 6-phosphate
α-D-mannopyranose 6-phosphate
α-D-glucose 6-phosphate
β-D-glucose 6-phosphate
α-D-galactose 6-phosphate
β-D-galactose 6-phosphate
L-xylulose 5-phosphate
D-xylulose 5-phosphate
1-deoxy-D-xylulose 5-phosphate
aldehydo-D-arabinose 5-phosphate
L-ribulose 5-phosphate
D-ribulose 5-phosphate
aldehydo-D-ribose 5-phosphate
α-D-ribose 5-phosphate
β-D-ribose 5-phosphate
α-D-ribose-1-phosphate
2-deoxy-α-D-ribose 1-phosphate
α-D-galactose 1-phosphate
β-D-glucopyranose 1-phosphate
β-D-fructofuranose 1-phosphate
α-D-mannose 1-phosphate
methyl β-D-glucoside 6-phosphate
aldehydo-L-galactonate
L-gulonate
D-altronate
L-idonate
guanosine 2',3'-cyclic monophosphate
adenosine 2',3'-cyclic monophosphate
8-oxo-GTP
8-oxo-GMP
8-oxo-dGTP
8-oxo-dGMP
adenosine 3'-monophosphate
guanosine 3'-monophosphate
cyclic-AMP
pppGpp
ppGpp
1-(5-phospho-β-D-ribosyl)-AMP
1-(5-phospho-β-D-ribosyl)-ATP
adenylo-succinate
5'-deoxyadenosine
5-fluorocytosine
P1,P4-bis(5'-adenosyl) tetraphosphate
2-hydroxy-dATP
5-hydroxy-CTP
β-nicotinamide D-ribonucleotide
2-sulfanyl-N6-dimethylallyladenosine37 in tRNA
2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA
cyclic di-3',5'-guanylate