an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-carboxy-L-threo-pentonate

cyclic- 3,4-O-oxalyl-L-threonate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

bisorganyltrisulfane

cyclic-2,3-O-oxalyl-L-threonate

2-carboxy-L-xylonolactone

α-D-galacturonate 1-phosphate

S-ribosyl-L-homocysteine

autoinducer 2

selenodiglutathione

glutathioselenol

2-amino-3-carboxymuconate-6-semialdehyde

2-dehydro-3-deoxy-D-galactonate 6-phosphate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

glutathione disulfide

N⁵-carboxyaminoimidazole ribonucleotide

L-xylo-hex-3-ulono-1,4-lactone

4-amino-2-methyl-5-pyrimidinemethanol

oxidized DCPIP

reduced DCPIP

mercuriphenyl acetate

3-keto-L-gulonate 6-phosphate

L-dehydro-ascorbate

dehydroascorbate (bicyclic form)

N-succinyl-L,L-2,6-diaminopimelate

(R)-synephrine

(4-hydroxyphenyl)acetate

octopamine

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinylbenzoate

hydroxypyruvate

5-(methylsulfanyl)-ribulose 1-phosphate

4-amino-4-deoxychorismate

2-iminoacetate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

2-dehydro-3-deoxy-D-gluconate

carbon monoxide

shikimate

methylamine

5-methoxytryptamine

5-methoxyindoleacetaldehyde

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

3-keto-β-D-galactose

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

prephenate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

(indol-3-yl)acetamide

propionamide

3-keto-L-gulonate

2,3-dioxo-L-gulonate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

4-aminobutanoate

succinate semialdehyde

3-oxopropanoate

3-dehydroshikimate

1-deoxy-L-glycero-tetrulose 4-phosphate

itaconate

2-phosphoglycolate

glycolate

DNA without lesion

(L-threonylcarbamoyl)adenylate

ammonia

tryptamine

H₂

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

2-(α-hydroxyethyl)thiamine diphosphate

5-dehydro-4-deoxy-D-glucarate

2-maleylacetate

phloretin

pinocembrin chalcone

pinosylvin

nigerose

imidazole acetaldehyde

4-imidazoleacetate

5-hydroxyindole acetate

3,4-dihydroxyphenylacetaldehyde

prop-2-ynal

propynoate

D-glucurono-6,3-lactone

4-acetamidobutanal

4-acetamidobutanoate

dimethylsulfoniopropanoate

oxalosuccinate

shikimate 3-phosphate

L-gulono-1,4-lactone

4-maleyl-acetoacetate

4-fumaryl-acetoacetate

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

preuroporphyrinogen

ADP-D-glycero-β-D-manno-heptose

ADP-L-glycero-β-D-manno-heptose

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

acetoacetate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-galactonate

5-dehydro-D-gluconate

3'-phosphoadenylyl-sulfate

2-(4-hydroxyphenyl)-2-oxoacetate

phenylglyoxylate

nicotinate adenine dinucleotide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

lipid IV_A

2-C-methyl-D-erythritol 4-phosphate

α-D-glucosamine 1-phosphate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

pimeloyl-CoA

8-amino-7-oxononanoate

(R)-pantothenate

2-dehydropantoate

(S)-dihydroorotate

citrate

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

porphobilinogen

urea

acetyl phosphate

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

L-histidinol phosphate

histidinal

histidinol

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

3-phosphooxypyruvate

3-deoxy-D-manno-octulosonate 8-phosphate

coproporphyrinogen III

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

orotidine 5'-phosphate

β-nicotinate D-ribonucleotide

quinolinate

N-(5-phosphoribosyl)-anthranilate

hydrogen selenide

O-acetyl-L-serine

aminoacetone

3-deoxy-α-D-manno-2-octulosonate

anthranilate

thiamine phosphate

thiamine diphosphate

cis-coumarinic acid-β-D-glucoside

scopolin

4-hydroxybenzaldehyde

4-methylumbelliferyl glucoside

L-canavanine

carbamoyl phosphate

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

urocanate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

phosphoenolpyruvate

O-ureido-L-homoserine

canavaninosuccinate

L-arginino-succinate

5-enolpyruvoyl-shikimate 3-phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

hydrogen peroxide

xanthine

4'-phosphopantetheine

oxaloacetate

enol-phenylpyruvate

(2-hydroxyphenyl)acetate

homogentisate

prenyl diphosphate

isopentenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

squalene

hop-22(29)-ene

5-deoxy-α-ribose 1-phosphate

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

glycerone phosphate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(D-ribitylamino)uracil

carbonic acid

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

CO₂

3-methyl-2-oxobutanoate

(2S)-2-isopropylmalate

lipid X

lipid A disaccharide (E. coli)

2-phenylethanol

2-methylbutanol

2-methylbutanal

3-methylbutanol

3-methylbutanal

isobutanol

indole-3-glycol

indole-3-glycol aldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

H₂O

L-α-amino-ε-keto-pimelate

L-citrulline

L-methionine

L-lysine

L-cysteine

L-asparagine

L-leucine

L-isoleucine

L-alanine

L-valine

L-tryptophan

L-proline

glycine

L-arginine

L-glutamine

L-histidine

L-serine

L-aspartate

L-glutamate

L-phenylalanine

L-tyrosine

L-threonine

L-4-hydroxyglutamate semialdehyde

L-glutamate-5-semialdehyde

L-dopa

L-homoserine

L-canaline

S-sulfo-L-cysteine

L-ornithine

L-aspartate 4-semialdehyde

L-homocysteine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

O-phospho-L-homoserine

meso-diaminopimelate

L-selenocysteine

L-cystathionine

L-aspartyl-4-phosphate

L,L-diaminopimelate

N-formimino-L-glutamate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-carbamoyl-L-aspartate

β-alanine

D-glutamate

D-phenylalanine

D-proline

D-alanine

L-2-amino-3-oxobutanoate

seleno-L-homocysteine

L-selenomethionine

3-phospho-L-serine

S-methyl-L-methionine

N-acetyl-L-methionine

N-acetyl-L-glutamate

5-hydroxy-L-tryptophan

(2E,6E)-farnesol

(2E,6E)-farnesyl diphosphate

DNA with lesion

phenylacetate

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

protochlorophyllide a

Mg-protoporphyrin

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)alamin

adenosylcobalamin

cob(I)inamide

adenosylcobinamide

protoheme

N₂

hydrogen cyanide

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrinogen IX

protoporphyrin IX

uroporphyrinogen-III

(Z,Z)-biliverdin-IX α

siroheme

S⁰

Hg⁰

hydrogen sulfide

oxygen

sn-glycerol 3-phosphate

(R)-glycerate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

1-oleoyl-2-lyso-glycerone phosphate

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

hydroxyl radical

monodehydroascorbate radical

nitric oxide

superoxide

S-(hydroxymethyl)glutathione

dimethyl sulfide

3-dimethylsulfoniopropionaldehyde

methionol

3-(methylsulfanyl)propanal

glutathione

thiocyanate

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

coenzyme M

L-cysteate

3-sulfopyruvate

3-(N-morpholino)propanesulfonate

isethionate

1-butanesulfonate

Fe³⁺

ammonium

K⁺

H⁺

Mg²⁺

Hg²⁺

Cu²⁺

Fe²⁺

Ni²⁺

OH^-

hydrogensulfite

selenite

nitrite

molybdate

sulfate

selenate

sulfite

thiosulfate

hydrogencarbonate

phosphate

triphosphate

diphosphate

trimethyl sulfonium

4-methylphenol

4-[(Z)-2-aminoethenyl]phenol

4-[(E)-2-(methylamino)ethenyl]phenol

(2Z)-2-aminobut-2-enoate

2-iminopropanoate

2-aminoprop-2-enoate

agmatine

N-acetylputrescine

tyramine

2-phenylethylamine

serotonin

1-oleoyl-2-palmitoyl-phosphatidylglycerol

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

D-alanyl-D-alanine

fluoroacetaldehyde

fluoroacetate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

acetamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

nicotinamide

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

(indol-3-yl)acetate

4-(2-iminoethyl)phenol

4-[(2Z)-2-(methylimino)ethyl]phenol

2-iminobutanoate

2-iminosuccinate

(3S)-3-isopropenyl-6-oxoheptanoyl-CoA

(3R)-3-isopropenyl-6-oxoheptanoyl-CoA

2-methylbutanoyl-CoA

phenylacetyl-CoA

(2E,5Z)-tetradecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-methylacetoacetyl-CoA

itaconyl-CoA

dihydro-4-coumaroyl-CoA

isovaleryl-CoA

(E)-glutaconyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

methylacrylyl-CoA

succinyl-CoA

malonyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

3'-dephospho-CoA

acetyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-dodec-2-enoyl-CoA

(E)-cinnamoyl-CoA

(S)-malyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

butanoyl-CoA

propanoyl-CoA

palmitoyl-CoA

stearoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

L-galactono-1,4-lactone

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

FADH₂

FMNH₂

FMN

FAD

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-8

methyl-CoM

coenzyme A

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

N⁵-methyltetrahydromethanopterin

tetrahydromethanopterin

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

L-ascorbate

nicotinate

riboflavin

pyridoxal 5'-phosphate

(S)-1-pyrroline-5-carboxylate

precorrin-1

precorrin-2

sirohydrochlorin

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropterin

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

guanine

adenine

2'-deoxyguanosine

2'-deoxyadenosine

2'-deoxyinosine

xanthosine

guanosine

inosine

adenosine

hypoxanthine

dAMP

dGMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

GMP

AMP

IMP

XMP

ITP

GTP

ATP

uracil

dCMP

orotate

dUDP

dTTP

dCDP

CDP

dTMP

dTDP

CTP

UTP

dCTP

dUTP

dUMP

UDP

UDP-α-D-galacturonate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galactofuranose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-sulfoquinovopyranose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-glucose

UDP-α-D-galactose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

CDP-4-dehydro-6-deoxy-α-D-glucose

CDP-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

cytidine

uridine

2'-deoxycytidine

2'-deoxyuridine

thymidine

thymine

UMP

CMP

isoguanine

preQ₁

2',4,4',6'-tetrahydroxychalcone

isoliquiritigenin

baicalein

6,7-dehydrobaicalein

coumarin

scopoletin

4-methylumbelliferone

preQ₀

neolinustatin

lotaustralin

linustatin

linamarin

taxiphyllin

2-hydroxy-2-methylpropanenitrile

(2R)-2-hydroxy-2-methylbutanenitrile

salicylaldehyde

benzene

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

urate

4-tyrosol

6-isobutyl-4-hydroxy-2-pyrone

normetanephrine

metanephrine

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

benzaldehyde

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

2,3-dihydroxybenzoate

protocatechuate

(R)-noradrenaline

(R)-adrenaline

dopamine

3,4-dihydroxymandelate

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

coumarinate

salicylate

benzoate

4-aminobenzoate

chorismate

succinate

fumarate

(S)-malate

D-galactarate

D-glucarate

3-carboxy-cis,cis-muconate

cis-aconitate

D-threo-isocitrate

(S)-lactate

(R)-lactate

sophorosyloxydocosanoate

13-sophorosyloxydocosanoate 6',6''-diacetate

13-[O(2')-β-D-glucopyranosyl-β-D-glucopyranosyloxy]docosanoate O(6'')-acetate

propanoate

acetate

formate

pyruvate

butanoate

octanoate

(2E,6E)-farnesoate

3-oxoadipate

(3E,5Z)-tetradecadienoate

phytenate

stearate

palmitate

D-gluconate

(R)-pantoate

D-tagaturonate

aldehydo-D-galacturonate

aldehydo-D-glucuronate

(3S)-3-isopropenyl-6-oxoheptanoate

(3R)-3-isopropenyl-6-oxoheptanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

glyoxylate

2-oxoglutarate

2-oxobutanoate

methylglyoxal

diacetyl

(2E,6E)-farnesal

3-(N-morpholino)propanal

glycolaldehyde

1-octanal

formaldehyde

butan-1-al

isobutanal

1-propanal

acetaldehyde

(S)-lactaldehyde

phytenal

L-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

α-D-xylopyranose

β-L-rhamnopyranose

α-L-rhamnopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

butan-1-ol

methanol

propan-1-ol

ethanol

phytol

glycerol

galactitol

(1R,2R,4S)-limonene-1,2-diol

(1S,2S,4R)-limonene-1,2-diol

myo-inositol

galactinol

D-galactosylononitol

D-ononitol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-nonaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans phytofluene

15-cis-phytoene

(4S)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone

(4R)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone

(+)-(1S,4R)-limonene-1,2- epoxide

(1R,4S)-1-hydroxymenth-8-en-2-one

(1S,4R)-1-hydroxymenth-8-en-2-one

di-trans,octa-cis-undecaprenol

3-nonaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

heptosyl-Kdo₂-lipid A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

heptosyl-Kdo₂-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

betalamate

miraxanthin V

betanidin

betanidin quinone

trans-resveratrol

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

isoprimeverose

raffinose

maltotriose

stachyose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

α-maltose

sucrose

allolactose

melibiose

α,α-trehalose

α-lactose

β-D-cellobiose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

β-L-fucopyranose

α-L-fucopyranose

β-D-fructofuranose

L-fuculose

keto-L-rhamnulose

D-xylulose

D-ribulose

L-ribulose

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

α-maltose 1-phosphate

α,α-trehalose 6-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

GDP-α-D-glucose

ADP-α-D-glucose

GDP-α-D-rhamnose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-α-D-mannuronate

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

D-tagatofuranose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

L-xylulose 5-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

L-fuculose 1-phosphate

L-rhamnulose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

aldehydo-L-galactonate

L-idonate

D-altronate

L-gulonate

D-galactonate

8-oxo-GTP

8-oxo-dGTP

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

adenylo-succinate

pppGpp

ppGpp

cyclic-AMP

5'-deoxyadenosine

5-hydroxy-CTP

2-hydroxy-dATP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate