an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

α-D-glucosamine 1-phosphate

CO₂

carbon monoxide

3-phosphonopyruvate

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

hydrogenobyrinate a,c-diamide

arsenite

ethyl acetate

sinapoyltartronate

2-hydroxymalonate

sinapoyl-CoA

N-3-oxalyl-L-2,3-diaminopropanoate

prephenate

(indol-3-yl)pyruvate

N-benzoyl-4-methoxyanthranilate

N-benzoyl-4-hydroxyanthranilate

N-tetradecanoylglycyl-peptide

glycyl-peptide

L-N²-(2-carboxyethyl)arginine

sym-homospermidine

propane-1,3-diamine

isopyridoxal

S-methyl-5'-thioadenosine

glutathione disulfide

L-carnitinamide

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

adenosine 3',5'-bisphosphate

ethanolamine

N-methyl-(R,S)-tetrahydrobenzylisoquinoline

(R,S)-tetrahydrobenzylisoquinoline

coproporphyrinogen III

oxaloacetate

thioacetate

(R)-1-aminopropan-2-ol

carbamoyl phosphate

N-methylaniline

N,N-dimethylaniline-N-oxide

taxa-4(20),11-dien-5α-ol

4-methyl-3-oxoadipate

O-phosphoethanolamine

palmitaldehyde

2-hydroxybiphenyl

allopregnanolone

methyleugenol

hydrogen peroxide

4-hydroxybenzaldehyde

1,4-dihydroxy-2-naphthoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

1,2-di-O-sinapoyl-β-D-glucose

glycerone phosphate

dihydroxyacetone

phosphoenolpyruvate

15S-hydroxypentaenoate

sabinene hydrate

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

2,5-hexanedione

(2S,5S)-hexanediol

hydroxylamine

acetyl phosphate

methylamine

2-methylpropan-1-amine

anthranilate

deoxyamidinoproclavaminate

6-deoxyerythronolide B

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

dihydromacarpine

12-hydroxydihydrochelirubine

citrate

3-dehydrocarnitine

3-deoxy-D-arabino-heptulosonate 7-phosphate

2'-deoxy-5-methylcytidylate

D-xylonate

D-xylono-1,4-lactone

glycolate

2-phosphoglycolate

cycasin

methylazoxymethanol

N-methyl-2-oxoglutaramate

L-5-carboxymethylhydantoin

8-oxocoformycin

coformycin

3-carboxy-4-methoxy-N-methyl-2-pyridone

(2S)-4-acetamido-2-aminobutanoate

3-dehydroquinate

L-quinate

N^ω-phosphocreatine

urea

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribitylamino)uracil

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N¹-(5-phospho-β-D-ribosyl)glycinamide

N-formylmaleamate

2,5-dihydroxypyridine

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

3''-deamino-3''-oxonicotianamine

2'-deoxymugineate

isopentenyl diphosphate

(S)-6-hydroxynicotine

fecosterol

5-β-androstane-3,17-dione

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine 4-sulfate

mesaconate

2,5-dioxopentanoate

dehydro-D-arabinono-1,4-lactone

D-arabinono-1,4-lactone

melatonin

3-keto-β-D-galactose

tropinone

pseudotropine

5-carboxymethyl-2-hydroxymuconate

2-hydroxy-5-carboxymethylmuconate semialdehyde

6-methylsalicylate

3-keto-L-gulonate

isophenoxazine

phosphocholine

3-ureidopropanoate

H₂

propan-2-ol

2,5-didehydro-D-gluconate

2-keto-D-gluconate

4'-phosphopantetheine

(R)-4'-phosphopantothenoyl-L-cysteine

L-thyroxine phenolic β-D-glucuronide

L-thyroxine acyl β-D-glucuronide

5-hydroxytryptophol glucuronide

5-hydroxytryptophol

N-acetyl-serotonin glucuronide

cotinine-glucuronide

cotinine

nicotine-glucuronide

4-amino-4-deoxychorismate

isochorismate

oxalate

2,3-didehydroadipyl-CoA

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

S-acetyldihydrolipoamide

dihydrolipoamide

hydroxypyruvate

N-(5-phosphoribosyl)-anthranilate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

4-acetamidobutanoate

4-acetamidobutanal

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

shikimate 3-phosphate

shikimate

L-arogenate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

proclavaminate

amidinoproclavaminate

preuroporphyrinogen

carbonic acid

acetoacetate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

3-phosphooxypyruvate

succinate semialdehyde

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

4-hydroxy-2-nonenal

DNA without lesion

cis-3-phenylcyclohexa-3,5-diene-1,2-diol

(E)-3-(methoxycarbonyl)pent-2-enedioate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

3-amino-1-hydroxyacetone 1-phosphate

hydrogenobyrinate

γ-butyrobetaine

3-mercaptopyruvate

O-acetyl-L-serine

nicotinate adenine dinucleotide

2-oleoylglycerol

D-gluconate 6-phosphate

N-acetyl-D-muramate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

prephytoene diphosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

(4S)-4-hydroxy-2-oxoheptanedioate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

3-hydroxypropanoate

porphobilinogen

5-aminolevulinate

5-methylsalicylate

4-methylsalicylate

L-histidinol phosphate

propionamide

(indol-3-yl)acetamide

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

2-oxoglutaramate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

(S)-ureidoglycolate

1-deoxy-L-glycero-tetrulose 4-phosphate

(L-threonylcarbamoyl)adenylate

xanthine

norspermidine

carboxynorspermidine

cis,cis-muconate

(+)-muconolactone

muconolactone

(R)-mandelate

(S)-mandelate

4-fumaryl-acetoacetate

(1R,2R)-cyclohexa-3,5-diene-1,2-diol

2-iminoacetate

2-phenylethanol

2-methylbutanal

2-methylbutanol

3-methylbutanal

3-methylbutanol

isobutanol

indole-3-glycol aldehyde

indole-3-glycol

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

2-maleylacetate

3-deoxy-α-D-manno-2-octulosonate

estrone 3-sulfate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

benzoylsuccinyl-CoA

(S)-4-amino-5-oxopentanoate

creatinine

6-aminohexanoate

6-aminohexanoate linear dimer

(R)-2,3-dihydroxy-3-methylpentanoate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

2-dehydro-3-deoxy-D-galactonate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

1-pyrroline

6-phospho D-glucono-1,5-lactone

3-hydroxypropanal

1,3-propanediol

5-amino-6-(D-ribitylamino)uracil

5-oxo-L-proline

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate-enol-lactone

8-amino-7-oxononanoate

pimeloyl-CoA

chloramphenicol

3-dehydroshikimate

S-ribosyl-L-homocysteine

5-deoxy-α-ribose 1-phosphate

5-(methylsulfanyl)-α-D-ribose

lipid IV_A

lipid A disaccharide (E. coli)

tartronate semialdehyde

histidinol

cyclopentanone

cyclopentanol

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

histidinal

4-aminobutanoate

lipid X

oxalosuccinate

ammonia

autoinducer 2

5-enolpyruvoyl-shikimate 3-phosphate

urocanate

4-imidazolone-5-propanoate

(S)-2-acetolactate

adipate

6-oxohexanoate

6-aminohexanoate cyclic dimer

L-arginino-succinate

homogentisate

3'-ketosucrose

4-maleyl-acetoacetate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

2'-N-acetylparomamine

2-deoxystreptamine

UDP-α-D-kanosamine

2'-deamino-2'-hydroxyneamine

6'-dehydroparomamine

paromamine

2'-deamino-2'-hydroxy-6'-dehydroparomamine

2'-deamino-2'-hydroxyparomamine

protoanemonin

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

5-phospho-β-D-ribosylamine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

4-oxoglutaramate

pyruvic oxime

(3E)-2-oxopent-3-enoate

4-oxalocrotonate

bisorganyltrisulfane

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-oxopent-4-enoate

(2E)-2-hydroxypenta-2,4-dienoate

2,6-dioxo-6-phenylhexa-3-enoate

β-nicotinate D-ribonucleotide

quinolinate

(R)-4'-phosphopantothenate

(R)-1-amino-2-propanol O-2-phosphate

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

7-epicholate

6-hydroxy-3-succinoyl-pyridine

N-methylmyosmine

maleamate

pseudooxynicotine

4-oxo-4-(3-pyridyl)-butanoate

4-oxo-4-(pyridin-3-yl)butanal

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

UDP-N-acetyl-α-D-glucosaminouronate

3,6,7-trimethylquercetagetin

androsterone

3,5,3'-triiodo-L-thyronine

17-β-hydroxy-5-α-androstan-3-one

testosterone

estrone

ethene

(indol-3-yl)acetate

phenylacetate

(+)-7-epi-jasmonate

L-thyroxine

cholestane-3-β-5-α,6-β-triol

5,6-α-epoxy-5-α-cholestan-3-β-ol

5,6-β-epoxy-5-β-cholestan-3-β-ol

5-α-pregnane-3,20-dione

24-methylenecycloartanol

cycloartenol

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

5β-cholestane-3α,7α,12α-triol

solasodine

cholesterol

zymosterol

5β-cholestane-3α,7α-diol

3-α-hydroxy-5-β-androstane-17-one

5-α-androstan-3α,17β-diol

3-β-hydroxyandrost-5-en-17-one

solasodine 3-O-β-D-glucoside

brassicasterol 3-O-β-D-glucoside

stigmasterol 3-O-β-D-glucoside

cholesteryl-β-D-glucoside

β-sitosterol 3-O-β-D-glucoside

glycocholate

taurocholate

glycochenodeoxycholate

taurochenodeoxycholate

cholate

chenodeoxycholate

isocholate

3-dehydrocholate

7α-hydroxy-5β-cholestan-3-one

7α,12α-dihydroxy-5β-cholestan-3-one

5α-androstane-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

allantoate

nicotinamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

(S)-(+)-allantoin

6-caprolactam

penicillin N

isopenicillin N

acetamide

bromochloromethane

3,5-dibromo-4-hydroxybenzoate

3,5-dibromo-4-hydroxybenzonitrile

3,5,3'-triiodo-L-thyronine phenolic β-D-glucuronide

3,5,3'-triiodo-L-thyronine acyl β-D-glucuronide

tetraiodothyroacetate ether glucuronide

tetraiodothyroacetate

tetraiodothyroacetate ester glucuronide

triiodothyroacetate ester glucuronide

3,3',5-triiodothyroacetate

triiodothyroacetate ether glucuronide

(S)-2-chloropropanoate

3-chlorobenzoate-cis-3,4-diol

5-chloro-4-hydroxy-2-oxopentanoate

5-chloro-5-deoxy-D-ribonate

3-chloro-cis,cis-muconate

4-chlorocatechol

5-chlorosalicylate

4-chlorosalicylate

sn-glycero-3-phosphocholine

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

aniline

2-phenylethylamine

N-acetyl-serotonin

choline

glycine betaine

betaine aldehyde

betaine aldehyde hydrate

agmatine

putrescine

spermidine

cadaverine

4-aminobutanal

(2Z)-2-aminobut-2-enoate

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

nitrate

hydrogencarbonate

sulfite

nitrite

sulfate

selenate

selenite

superoxide

thiosulfate

hydrogensulfite

molybdate

OH^-

chloride

bromide

phosphate

diphosphate

triphosphate

Fe³⁺

H⁺

ammonium

Co²⁺

Fe²⁺

Mg²⁺

trimethyl sulfonium

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

3-sulfocatechol

N-acetyl-D-galactosamine 6-O-sulfate

taurine

orthanilate

3-sulfopyruvate

L-cysteate

(2R)-3-sulfolactate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

methanethiol

thiocyanate

S-sulfanylglutathione

2'-hydroxybiphenyl-2-sulfinate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

chloramphenicol 3-acetate

1,2-benzoquinone monoimine

2-iminobutanoate

2-iminosuccinate

nitric oxide

hydroxyl radical

(8S)-HPETE

(S)-2-hydroxyglutarate

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

1-oleoyl-2-lyso-glycerone phosphate

(S)-ureidoglycine

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

sn-glycerol 1-phosphate

oxygen

hydrogen sulfide

S⁰

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

protoporphyrinogen IX

uroporphyrinogen-III

protoporphyrin IX

uroporphyrinogen-I

Mg-protoporphyrin

magnesium-protoporphyrin IX 13-monomethyl ester

protoheme

(Z,Z)-biliverdin-IX α

(2R,3Z)-phycocyanobilin

hydrogen cyanide

nitrous oxide

N₂

cob(II)yrinate a,c-diamide

adenosylcobyrate

adenosylcobinamide

aquacobalamin

cob(II)alamin

cob(I)yrinate a,c-diamide

cobalt-precorrin-3

cobalt-precorrin-2

cobalt-factor III

cobalt-sirohydrochlorin

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

cobalt-precorrin-6A

cobalt-precorrin-6B

cobalt-precorrin-5B

adenosylcobalamin

adenosylcobalamin 5'-phosphate

cobyrinate

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-8

cobalt-precorrin-7

cob(II)yrinate c-monoamide

cob(I)inamide

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

(2E,6E)-farnesyl diphosphate

pristanate

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

alanopine

L-aspartyl-4-phosphate

2-hydroxy-5-oxoproline

O-acetyl-L-homoserine

cis-4-hydroxy-D-proline

trans-4-hydroxy-L-proline

N-formimino-glycine

N-carbamoyl-L-aspartate

N-acetyl-L-phenylalanine

N-acetyl-L-ornithine

N-acetyl-L-aspartate

N-acetyl-L-methionine

N-acetyl-L-glutamate

N-formyl-L-glutamate

formyl-L-isoglutamine

N-formimino-L-glutamate

sarcosine

N,N-dimethylglycine

N-methyl-L-tryptophan

(2S, 3S)-3-methylaspartate

3-phospho-L-serine

D-alanine

D-glutamate

D-proline

L-tyrosine

L-phenylalanine

L-tryptophan

L-histidine

glycine

L-cysteine

L-threonine

L-glutamine

L-serine

L-asparagine

L-glutamate

L-aspartate

L-arginine

L-lysine

L-2,3-diaminopropanoate

L-alanine

L-leucine

L-proline

creatine

β-alanine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

L-threo-3-phenylserine

L-valine

L-isoleucine

L-methionine

L-2,4-diaminobutanoate

L-ornithine

L,L-diaminopimelate

L-isoglutamine

L-citrulline

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-homoserine

L-homocysteine

L-aspartate 4-semialdehyde

O-phospho-L-homoserine

L-allo-threonine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

4-methylphenol

GDP

ppGpp

GTP

pppGpp

ADP

ATP

AMP

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

adenylo-succinate

IMP

dGDP

dADP

dITP

dIDP

ITP

IDP

dGTP

dATP

GMP

2'-deoxyguanosine

2'-deoxyadenosine

dGMP

dAMP

isoguanine

8-oxo-dGTP

8-oxo-GTP

ADP-α-D-glucose

ADP-D-ribose

N^ω-(ADP-D-ribosyl)-L-arginine

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-glucose

NAD⁺

NADP⁺

NADH

NADPH

5,6-dihydrothymine

5,6-dihydrouracil

CDP-choline

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

dTDP-β-L-mycarose

dTDP-D-desosamine

UDP-α-D-galactose

UDP-α-D-glucose

UDP-2,3-diacetamido-2,3-dideoxy-α-D-mannuronate

UDP-2,3-diacetamido-2,3-dideoxy-α-D-glucuronate

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galactofuranose

UDP-2-acetamido-3-amino-2,3-dideoxy-α-D-glucuronate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

preQ₁

N¹-ethyladenine

N3-methylcytosine

N¹-methyladenine

adenine

guanine

thymine

uracil

cytosine

cyclic di-3',5'-guanylate

dCMP

dTMP

dUMP

dCDP

dUDP

dTDP

dUTP

dCTP

dTTP

UDP

CDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

5-hydroxy-CTP

2-hydroxy-dATP

2'-deoxyuridine

2'-deoxycytidine

adenosine

L-gulonate

D-gluconate

D-galactonate

L-gluconate

D-idonate

2-deoxy-scyllo-inosamine

2-deoxy-L-scyllo-inosose

3-amino-2,3-dideoxy-scyllo-inosose

5-dehydro-4-deoxy-D-glucuronate

XXXG xyloglucan oligosaccharide

maltotriose

glucosyl-(heptosyl)₃-glucosyluronate-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

sucrose

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl--D-galactosamine 6-sulfate

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine

α-lactose

maltotetraose

maltopentaose

maltohexaose

maltoheptaose

lychnose

isolychnose

raffinose

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

6-acetyl-D-glucose

N-acetyl-D-glucosaminate

1-O-acetyl-α-maltose

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3-dehydro-D-glucopyranose

neamine

kanamycin X

kanamycin C

kanamycin D

3''-deamino-3''-hydroxykanamycin B

kanamycin A

2'-dehydrokanamycin A

kanamycin B

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 1,7-bisphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

L-fuculose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

D-tagatofuranose 1,6-bisphosphate

β-D-fructose 1,6-bisphosphate

6-deoxy-5-ketofructose 1-phosphate

D-tagatofuranose 6-phosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

erythrulose 1-phosphate

D-xylulose 5-phosphate

L-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

glycerol

xylitol 5-phosphate

D-mannitol

xylitol

D-ribitol

D-threitol

β-D-fructofuranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-galactosamine

N-acetyl-α-D-glucosamine

N-acetyl-β-D-glucosamine

D-erythrulose

keto-D-fructose

D-glyceraldehyde

β-D-ribopyranose

α-D-ribofuranose

β-D-galactopyranose

α-D-galactopyranose

β-D-mannopyranose

β-D-glucopyranose

α-D-glucopyranose

aldehydo-D-mannose

α-D-lyxopyranose

D-ribulose

D-xylulose

L-glucose

trans-3-hydroxycotinine-glucuronide

trans-3'-hydroxycotinine

salicylaldehyde

taxa-4,11-diene

all-trans-retinal

11-cis-retinol

all-trans-retinoate

11-cis-retinyl palmitate

brassicasterol

stigmasterol

sitosterol

oleanolate 3 β-D-glucuronoside

oleanolate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(+)-menthofuran

(+)-pulegone

geranial

geraniol

geranyl diphosphate

apo-4'-lycopenal

all-trans-phytoene

15-cis-phytoene

apo-4'-lycopenoate

erythromycin D

3-α-mycarosylerythronolide B

erythronolide B

ricinine

(S)-nicotine

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

geranylgeranyl diphosphate

all-trans-heptaprenyl diphosphate

dioleoyl phosphatidate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

myo-inositol

scyllo-inosose

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

phytate

1D-myo-inositol 3-diphosphate 1,2,4,5,6-pentakisphosphate

1D-myo-inositol 1-diphosphate 2,3,4,5,6-pentakisphosphate

1D-myoinositol 5-diphosphate 1,2,3,4,6-pentakisphosphate

3,5-bisdiphosphoinositol-1D-myo-inositol 2,3,4,6-tetrakisphosphate

1D-myo-inositol 1,5-bis(diphosphate) 2,3,4,6-tetrakisphosphate

D-ononitol

protocatechuate

biphenyl-2,3-diol

4-methylcatechol

catechol

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

2,3-dihydroxybenzoate

phytosphingosine 1-phosphate

sphinganine 1-phosphate

butan-1-ol

ethanol

phytol

propan-1-ol

methanol

methylglyoxal

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

phytenal

(S)-lactaldehyde

acetaldehyde

formaldehyde

isobutanal

1-heptanal

1-octanal

1-propanal

butan-1-al

diacetyl

6-hydroxypseudooxynicotine

acetone

caldariellaquinone

a coenzyme-A group

geranate

acetate

L-carnitine

mycophenolate

5-dehydro-L-gluconate

laurate

octanoate

decanoate

palmitate

stearate

myristate

arachidate

heptanoate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

oleate

linoleate

arachidonate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

(15Z)-tetracosenoate

phytenate

15-KETE

3-oxoadipate

pyruvate

formate

propanoate

(R)-lactate

(S)-lactate

(R)-3-hydroxybutanoate

cis-aconitate

trans-aconitate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

3-carboxy-cis,cis-muconate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

chorismate

(3E)-2-oxohex-3-enedioate

succinate

fumarate

maleate

(S)-malate

4-(methylsulfanyl)-2-oxobutanoate

2-oxoglutarate

glyoxylate

2-oxobutanoate

(R)-4-hydroxy-4-methyl-2-oxoglutarate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

4-aminobenzoate

benzoate

isomethyleugenol

methylchavicol

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

biphenyl

(2E,4E)-6-(2-aminophenyl)-2-hydroxy-6-oxohexa-2,4-dienoate

2'-aminobiphenyl-2,3-diol

4-tyrosol

chavicol

2-aminophenol

3-methylphenol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-8

demethylmenaquinol-8

demethylmenaquinol-7

menaquinol-8

menaquinol-7

ubiquinol-8

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

(S)-4-hydroxymandelonitrile

isoeugenol

eugenol

1-O-sinapoyl-β-D-glucose

(2R,3S,4S)-leucopelargonidin

(2R,3S,4S)-leucocyanidin

(2R,3S,4S)-leucodelphinidin

(+)-dihydrokaempferol

(+)-taxifolin

(+)-dihydromyricetin

3,7,4'-trimethylquercetin

3,7-dimethylquercetin

3-O-methylquercetin

3,7,3',4'-tetramethylquercetin

2'-hydroxy 3,7,4'-trimethylquercetin

3,7,4'-trimethylquercetin 2'-O-β-D-glucoside

3,7,3',4'-tetramethylquercetin 2'-O-β-D-glucoside

2'-hydroxy 3,7,3',4'-tetramethylquercetin

3,6,7,3'-tetramethylquercetagetin

3,7,3'-trimethylquercetagetin

3,7-dimethylquercetagetin

3,6,7,3',4'-pentamethylquercetagetin

2'-hydroxy 3,6,7,3',4'-pentamethylquercetagetin

2'-hydroxy 3,6,7,4'-tetramethylquercetagetin 3'-O-β-D-glucoside

3,6,7,4'-tetramethylquercetagetin 3'-O-β-D-glucoside

3,6,7,4'-tetramethylquercetagetin

3,7,4'-trimethylquercetagetin 3'-O-β-D-glucoside

3,7,4'-trimethylquercetagetin

2'-hydroxy 3,6,7,4'-tetramethylquercetagetin

3,6,7,2',4'-pentamethylquercetagetin 3'-O-β-D-glucoside

3,6,7,2',4'-pentamethylquercetagetin

monodemalonylsalvianin

bisdemalonylsalvianin

malonylshisonin

shisonin

(indole-3-yl)acetonitrile

acrylonitrile

preQ₀

7,8-dihydrolumazine

molybdopterin

cyclic pyranopterin phosphate

7,8-dihydropterin

molybdopterin adenine dinucleotide

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

FMN

FAD

riboflavin

FMNH₂

FADH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

9H carbazole

sirohydrochlorin

precorrin-3A

precorrin-2

precorrin-1

precorrin-8x

precorrin-3B

precorrin-4

precorrin-5

precorrin-6A

precorrin-6B

precorrin-7

nicotinate

pyridoxine 5'-phosphate

pyridoxine

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxal 5'-phosphate

pyridoxal

4-pyridoxate

coenzyme A

(R)-NADHX

(S)-NADHX

butyl acetate

geranyl acetate

mycophenolic acid O-acyl-glucuronide

mycophenolic acid phenolic glucuronide

D-glucono-1,5-lactone

L-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

D-galactono-1,4-lactone

L-homoserine lactone

choloyl-CoA

chenodeoxycholoyl-CoA

acetyl-CoA

oxalyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

isobutanoyl-CoA

succinyl-CoA

dihomo γ-linolenoyl-CoA

malonyl-CoA

(24R,25R)-3α,7α,12α,24-tetrahydroxy-5β-cholestanoyl CoA

(25R)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2E,5Z)-tetradecenoyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

2-methylacetoacetyl-CoA

3'-dephospho-CoA

(E)-glutaconyl-CoA

L-carnitinyl-CoA

γ-butyrobetainyl-CoA

3-hydroxypropanoyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

crotonobetainyl-CoA

phenylacetyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

hexadecanedioyl-CoA

myristoyl-CoA

palmitoyl-CoA

stearoyl-CoA

icosanoyl-CoA

pristanoyl-CoA

octanoyl-CoA

decanoyl-CoA

lauroyl-CoA

propanoyl-CoA

cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

2-carboxy-cerotoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA