an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

scopolin

4-hydroxybenzaldehyde

4-methylumbelliferyl glucoside

nicotinate adenine dinucleotide

pimeloyl-CoA

shikimate

2-phosphoglycolate

glycolate

prephenate

N¹-(5-phospho-β-D-ribosyl)glycinamide

preuroporphyrinogen

N-acetyl-L-glutamate 5-semialdehyde

2-dehydro-3-deoxy-D-gluconate 6-phosphate

1-phosphatidyl-myo-inositol

1-phosphatidyl-myo-inositol 2-mannose

5-phospho-β-D-ribosylamine

urea-1-carboxylate

L-histidinol phosphate

lipid X

L-canavanine

urea

anthranilate

hydrogen selenide

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

(R)-1-aminopropan-2-ol

(R)-1-amino-2-propanol O-2-phosphate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

3-phosphooxypyruvate

carbonic acid

H₂

β-nicotinate D-ribonucleotide

β-D-ribosylnicotinate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

4'-phosphopantetheine

3-deoxy-D-arabino-heptulosonate 7-phosphate

α-D-galactosyl-diphosphoundecaprenol

urocanate

4-imidazolone-5-propanoate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

coproporphyrinogen III

3-deoxy-D-manno-octulosonate 8-phosphate

prephytoene diphosphate

(R)-4'-phosphopantothenoyl-L-cysteine

dimethylsulfoniopropanoate

4-acetamidobutanal

4-acetamidobutanoate

D-glucurono-6,3-lactone

prop-2-ynal

propynoate

3,4-dihydroxyphenylacetaldehyde

5-hydroxyindole acetate

imidazole acetaldehyde

4-imidazoleacetate

2-maleylacetate

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

xanthine

2-iminoacetate

N-ethylglycine

ethylamine

methylamine

3-hydroxyanthranilate

2-amino-3-carboxymuconate-6-semialdehyde

glutathione disulfide

6-amino-2-oxohexanoate

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

(S)-4-amino-5-oxopentanoate

3-demethylubiquinol-6

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

(S)-dihydroorotate

1-deoxy-L-glycero-tetrulose 4-phosphate

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

2-phenylethanol

2-methylbutanol

2-methylbutanal

3-methylbutanol

3-methylbutanal

isobutanol

indole-3-glycol

indole-3-glycol aldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

ManNAc-GlcNAc-PP-undecaprenol

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

4-maleyl-acetoacetate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

dethiobiotin

oxalosuccinate

orotidine 5'-phosphate

acetyl phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

ethanolamine

hydrogen peroxide

5-amino-6-(D-ribitylamino)uracil

2-C-methyl-D-erythritol 4-phosphate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

(R)-pantothenate

(R)-4'-phosphopantothenate

carbamoyl phosphate

histidinal

histidinol

O-acetyl-L-serine

(2-hydroxyphenyl)acetate

homogentisate

3-dehydroquinate

3-dehydroshikimate

prenyl diphosphate

CO₂

N-(5-phosphoribosyl)-anthranilate

lipid A disaccharide (E. coli)

lipid IV_A

5-aminolevulinate

porphobilinogen

arsenite

glycerone phosphate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

oxaloacetate

phosphoenolpyruvate

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

H₂O

3-methyl-2-oxobutanoate

2-dehydropantoate

isopentenyl diphosphate

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

enol-phenylpyruvate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

picolinate

5-hydroxyindole thiazolidine carboxylate

ammonia

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

4-oxoglutaramate

1-piperideine-2-carboxylate

5-aminopentanoate

(4-hydroxyphenyl)acetate

L-dehydro-ascorbate

α-D-galacturonate 1-phosphate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

4-amino-2-methyl-5-pyrimidinemethanol

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

formamide

autoinducer 2

mercuriphenyl acetate

(R)-mevalonate diphosphate

(R)-5-phosphomevalonate

dialurate

carbon monoxide

L-xylo-hex-3-ulono-1,4-lactone

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

N-Formyl-L-kynurenine

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

γ-butyrobetaine

β-D-fructose 2,6-bisphosphate

4-amino-4-deoxychorismate

ADP-L-glycero-β-D-manno-heptose

DNA without lesion

L-gulono-1,4-lactone

7,8-didemethyl-8-hydroxy-5-deazariboflavin

oxalate

5-methylcytosine

squalene

hop-22(29)-ene

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

O-ureido-L-homoserine

canavaninosuccinate

L-arginino-succinate

N-acetylglutamyl-phosphate

4-methyl-3-oxoadipate-enol-lactone

4-methyl-3-oxoadipate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

4-fumaryl-acetoacetate

acetoacetate

(R)-mevalonate

isoquinoline

isoquinolin-2(1H)-one

N-carbamoylputrescine

γ-L-glutamyl 5-phosphate

5-deoxy-α-ribose 1-phosphate

S-methyl-5'-thioadenosine

phosphocholine

N-dimethylethanolamine phosphate

O-phosphoethanolamine

N-methylethanolamine phosphate

3-deoxy-α-D-manno-2-octulosonate

2-hydroxy-5-carboxymethylmuconate semialdehyde

5-carboxymethyl-2-hydroxymuconate

S-ribosyl-L-homocysteine

(2Z,4E)-2-amino-6-oxohexa-2,4-dienoate

quinolinate

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

4-methylmuconolactone

citrate

selenophosphate

N-acetyl-D-muramate 6-phosphate

2-amino-2-deoxy-D-gluconate 6-phosphate

α-ribazole

4,4'-dihydroxy-3,3'-dimethoxystilbene

vanillin

α-D-glucosamine 1-phosphate

3-oxopropanoate

4-aminobutanoate

succinate semialdehyde

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

cis-coumarinic acid-β-D-glucoside

agmatine

putrescine

dehydrospermidine

spermidine

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

(2Z)-2-aminobut-2-enoate

2-iminopropanoate

2-aminoprop-2-enoate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

1-oleoyl-2-palmitoyl-phosphatidylglycerol

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

fluoroacetaldehyde

fluoroacetate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

2-chloro-5-methyl-maleylacetate

3-chloro-2-methyl-dienelactone

3-chloro-2-methyl-maleylacetate

3-chloro-cis,cis-muconate

2-chloro-5-methyl-dienelactone

3,5-dichloro-2-methyl-muconate

3,5-dichloro-2-methyl-muconolactone

2,4-dichlorotoluene

(1R,2S)-4,6-dichloro-3-methylcyclohexa-3,5-diene-1,2-diol

4,6-dichloro-3-methylcatechol

2-iminobutanoate

2-iminosuccinate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-4-imidazolecarboxyamide

nicotinamide

ethene

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

(indol-3-yl)acetate

phenylacetate

(+)-7-epi-jasmonate

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

L-galactono-1,4-lactone

3'-dephospho-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

methylacrylyl-CoA

succinyl-CoA

2-methylacetoacetyl-CoA

malonyl-CoA

acetyl-CoA

phenylacetyl-CoA

2-methylbutanoyl-CoA

(+)-7-epi-jasmonoyl-CoA

γ-butyrobetainyl-CoA

L-carnitinyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(Z)-15-tetracosenoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

butanoyl-CoA

propanoyl-CoA

decanoyl-CoA

octanoyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

FMN

FAD

FADH₂

FMNH₂

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

ubiquinol-10

ubiquinol-7

ubiquinol-6

ubiquinol-8

ubiquinol-9

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-10

3-demethylubiquinol-7

3-demethylubiquinol-8

3-demethylubiquinol-9

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

L-cysteinylglycine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

coenzyme A

molybdopterin

MoO₂-molybdopterin cofactor

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

thiamine

nicotinate

riboflavin

L-ascorbate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

L-carnitine

(S)-1-pyrroline-5-carboxylate

guanine

adenine

2'-deoxyinosine

2'-deoxyguanosine

2'-deoxyadenosine

xanthosine

guanosine

inosine

adenosine

hypoxanthine

dGMP

dAMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

IMP

XMP

GMP

AMP

ITP

GTP

ATP

dUDP

dCDP

uracil

dCMP

orotate

dUMP

dTTP

dUTP

dCTP

dTMP

dTDP

UTP

UDP

CTP

CDP

cytosine

cytidine

uridine

thymidine

2'-deoxyuridine

2'-deoxycytidine

thymine

UMP

CMP

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-galactose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galacturonate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-galactofuranose

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

CDP-α-D-paratose

CDP-α-tyvelose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-D-glucose

CDP-4-dehydro-6-deoxy-α-D-glucose

5-fluorouracil

isoguanine

preQ₁

precorrin-7

precorrin-8x

precorrin-6B

precorrin-1

precorrin-2

precorrin-6A

precorrin-5

precorrin-4

precorrin-3B

precorrin-3A

cob(I)alamin

adenosylcobalamin

6,7-dimethyl-8-(1-D-ribityl)lumazine

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

cyclic pyranopterin phosphate

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin 2',3'-cyclic phosphate

molybdopterin adenine dinucleotide

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

(+)-taxifolin

(+)-dihydromyricetin

(+)-dihydrokaempferol

(2R,3S,4S)-leucodelphinidin

(2R,3S,4S)-leucocyanidin

(2R,3S,4S)-leucopelargonidin

2',4,4',6'-tetrahydroxychalcone

scopoletin

coumarin

4-methylumbelliferone

neolinustatin

lotaustralin

linustatin

linamarin

taxiphyllin

hydrogen cyanide

preQ₀

2-hydroxy-2-methylpropanenitrile

(2R)-2-hydroxy-2-methylbutanenitrile

4-tyrosol

salicylaldehyde

urate

benzene

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

3,4-dihydroxyphenylacetate

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

coumarinate

salicylate

4-aminobenzoate

benzoate

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

4-methylphenol

(15Z)-tetracosenoate

butanoate

decanoate

octanoate

(2E,6E)-farnesoate

oleate

linoleate

γ-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

phytenate

palmitate

pristanate

stearate

(R)-pantoate

D-gluconate

acetate

aldehydo-D-galacturonate

aldehydo-D-glucuronate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

2-oxobutanoate

glyoxylate

pyruvate

2-oxoglutarate

4-(methylsulfanyl)-2-oxobutanoate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

L-kynurenine

L-cysteine

L-tyrosine

L-threonine

L-asparagine

L-serine

glycine

L-glutamine

L-lysine

L-histidine

L-arginine

L-aspartate

L-glutamate

L-phenylalanine

L-tryptophan

D-lysine

D-alanine

D-glutamate

L-aspartyl-4-phosphate

S-methyl-L-methionine

sarcosine

N-formyl-L-glutamate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

3-hydroxy-L-kynurenine

O-acetyl-L-homoserine

L-threonine 3-O-phosphate

3-phospho-L-serine

L-citrulline

O-succinyl-L-homoserine

L-homocysteine

L-canaline

L-ornithine

S-sulfo-L-cysteine

L-aspartate 4-semialdehyde

S-adenosyl-L-homocysteine

L-homoserine

O-phospho-L-homoserine

S-adenosyl-L-methionine

L-glutamate-5-semialdehyde

hypoglycin A

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-proline

L-alanine

L-leucine

L-isoleucine

L-valine

L-methionine

L,L-diaminopimelate

L-cystathionine

L-isoglutamine

β-alanine

chorismate

3-methyl-cis,cis-muconate

fumarate

succinate

(S)-malate

D-glucarate

cis-aconitate

D-threo-isocitrate

(R)-lactate

(S)-lactate

(R)-glycerate

formate

3-oxoadipate

methylglyoxal

(2E,6E)-farnesal

glycolaldehyde

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-ribopyranose

α-D-galactopyranose

β-D-galactopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

1-octanal

isobutanal

1-propanal

formaldehyde

acetaldehyde

butan-1-al

phytenal

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

propan-1-ol

methanol

ethanol

butan-1-ol

phytol

glycerol

D-sorbitol

L-iditol

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

(2E,6E)-farnesyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

phytyl diphosphate

15-cis-phytoene

all-trans-lycopene

all-trans phytofluene

all-trans-ζ-carotene

all-trans neurosporene

geranyl diphosphate

3-nonaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

geranylgeranyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-decaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

4'-α-L-Ara4N-α-Kdo-(2→4)-α-Kdo-(2→6)-[P4'-α-L-ara4N]-lipid A

α-Kdo-(2→6)-lipid IV_A

heptosyl-Kdo₂-lipid A

(heptosyl)₂-Kdo₂-lipid A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

iron(III) dicitrate

ferric-enterobactin complex

1-(β-D ribofuranosyl)nicotinamide

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-β-D-glucosamine

N-acetyl-α-D-glucosamine 1-phosphate

keto-D-fructose

β-D-fructofuranose

keto-L-sorbose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

ADP-α-D-glucose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-β-L-fucose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

β-D-galactose 6-phosphate

α-D-galactose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

maltotriose

raffinose

maltotetraose

stachyose

maltoheptaose

maltohexaose

maltopentaose

melibiose

sucrose

β-D-cellobiose

aldehydo-L-galactonate

L-gulonate

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-AMP

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

5'-deoxyadenosine

8-oxo-GTP

8-oxo-dGTP

pppGpp

ppGpp

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

5-fluorocytosine

hypoglycin B

DNA with lesion

ethylphosphate

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobyrate

Mg-protoporphyrin

adenosylcobinamide

adenosyl-cobinamide phosphate

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

chlorophyll a

protochlorophyllide a

cob(I)inamide

cob(I)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

protoheme

N₂

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrin IX

protoporphyrinogen IX

(Z,Z)-bilirubin-IX α

(Z,Z)-biliverdin-IX α

hydrogen sulfide

oxygen

Hg⁰

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

5,10-methenyltetrahydrofolate mono-L-glutamate

2-octaprenylphenol

superoxide

monodehydroascorbate radical

hydroxyl radical

3-dimethylsulfoniopropionaldehyde

methionol

3-(methylsulfanyl)propanal

S-(hydroxymethyl)glutathione

dimethyl sulfide

glutathione

methanethiol

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

L-cysteate

3-sulfopyruvate

(R)-S-lactoylglutathione

Fe³⁺

Mg²⁺

Co²⁺

Fe²⁺

Cu²⁺

Hg²⁺

H⁺

ammonium

trimethyl sulfonium

thiosulfate

hydrogencarbonate

OH^-

molybdate

selenide

phosphate

triphosphate

diphosphate

chloride