an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

4-acetamidobutanoate

4-acetamidobutanal

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

thiamine diphosphate

thiamine phosphate

(E)-4-coumaroyl-CoA

pinosylvin

pinocembrin chalcone

phloretin

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

(1S,4R)-2,4,5-trichloro-2,5-cyclohexadiene-1-diol

(3R,6R)-1,3,4,6-tetrachlorocyclohexa-1,4-diene

2-chloroethanol

1,2-dichloroethane

phosphoenolpyruvate

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

ethanolamine

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

carbon monoxide

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

S-methyl-5'-thioadenosine

glycerone phosphate

2-phenylethanol

2-methylbutanal

2-methylbutanol

3-methylbutanal

3-methylbutanol

isobutanol

indole-3-glycol aldehyde

indole-3-glycol

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

3-phosphooxypyruvate

acetoacetate

4-fumaryl-acetoacetate

4-maleyl-acetoacetate

(2-hydroxyphenyl)acetate

enol-phenylpyruvate

homogentisate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

cis-coumarinic acid-β-D-glucoside

scopolin

4-hydroxybenzaldehyde

4-methylumbelliferyl glucoside

S-Inosyl-L-homocysteine

S-methyl-5'-thioinosine

4-amino-4-deoxychorismate

pimeloyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

benzoylsuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

nigerose

α-ribazole

α-ribazole 5'-phosphate

α-D-galactosyl-diphosphoundecaprenol

N-carbamoylputrescine

anthranilate

N-(5-phosphoribosyl)-anthranilate

3-deoxy-D-arabino-heptulosonate 7-phosphate

2-dehydropantoate

5-deoxy-α-ribose 1-phosphate

orotidine 5'-phosphate

estrone 3-sulfate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

trans-O-hydroxybenzylidenepyruvate

O-acetyl-L-serine

isopentenyl diphosphate

N-ethylammeline

deethylsimazine

2,3-didehydroadipyl-CoA

(E)-2-benzylidenesuccinyl-CoA

3-methyl-2-oxobutanoate

(R)-pantothenate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

lanthionine

xanthine

2-maleylacetate

methylsalicylate

salicyl alcohol

prephenate

urocanate

5-hydroxy-feruloyl-CoA

5-hydroxyferulate

sinapoyl-CoA

sinapate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

6-phospho D-glucono-1,5-lactone

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

adenosine 3',5'-bisphosphate

glutathione disulfide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

prephytoene diphosphate

presqualene diphosphate

squalene

quinolinate

DNA without lesion

preuroporphyrinogen

porphobilinogen

2-(α-hydroxyethyl)thiamine diphosphate

N-acetyl-D-muramate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

N¹-(5-phospho-β-D-ribosyl)glycinamide

4-guanidinobutyramide

(lipoyl)adenylate

2-oleoylglycerol

2-keto-L-gulonate

5-phospho-β-D-ribosylamine

acetyl phosphate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

(25S)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

N-acetyl-L-glutamate 5-semialdehyde

(S)-dihydroorotate

6-aminohexanoate

6-aminohexanoate linear dimer

1,4-dihydroxy-2-naphthoate

1-deoxy-L-glycero-tetrulose 4-phosphate

N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-ureidoglycolate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

3'-phosphoadenylyl-sulfate

carbamoyl phosphate

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

3-dehydroquinate

3-dehydroshikimate

shikimate

succinate semialdehyde

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

oxalosuccinate

itaconate

(L-aspartyl)adenylate

(2,3-dihydroxybenzoyl)adenylate

dihydroxyacetone

prenyl diphosphate

(L-threonylcarbamoyl)adenylate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

methylamine

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

(4,5-dihydro-5-oxofuran-2-yl)-acetate

L-histidinol phosphate

imidazole acetol-phosphate

arsenite

S-formylglutathione

3-methyl-2-butenal

(R)-4'-phosphopantothenate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

histidinol

D-erythro-imidazole-glycerol-phosphate

histidinal

2-iminoacetate

ethylamine

N-ethylglycine

isoquinolin-2(1H)-one

isoquinoline

(E)-glutaconate

carbonic acid

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

4-imidazolone-5-propanoate

3-amino-1-hydroxyacetone 1-phosphate

α-D-glucosamine 1-phosphate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

2,5-diaminohexanoate

(R)-4'-phosphopantothenoyl-L-cysteine

4'-phosphopantetheine

O-demethylpuromycin

N-acetylpuromycin

N-acetyl-O-demethylpuromycin

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

selenophosphate

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

2,2'-disulfonyl azobenzene

phthalate

propionamide

(indol-3-yl)acetamide

4-guanidinobutanoate

acrylate

acrylamide

1,4-dihydroxy-2-naphthoyl-CoA

L-β-lysine

lipid IV_A

lipid A disaccharide (E. coli)

lipid X

5-amino-6-(D-ribitylamino)uracil

(R)-mevalonate diphosphate

(R)-5-phosphomevalonate

(R)-mevalonate

N-acetylglutamyl-phosphate

L-canavanine

canavaninosuccinate

L-arginino-succinate

O-ureido-L-homoserine

S-adenosyl 3-(methylsulfanyl)propylamine

2-O-(6-phospho-α-D-mannosyl)-D-glycerate

3-oxo-3-phenylpropanoyl-CoA

3α,7α-dihydroxy-24-oxo-5β-cholestanoyl CoA

hop-22(29)-ene

formamide

aminoacetone

urea-1-carboxylate

2-aminomalonate semialdehyde

γ-L-glutamyl 5-phosphate

dethiobiotin

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

hydrogen selenide

D-gluconate 6-phosphate

2-oxopent-4-enoate

(3E)-2-oxopent-3-enoate

(2E)-2-hydroxypenta-2,4-dienoate

(2Z,4E)-2-aminomuconate

2-amino-3-carboxymuconate-6-semialdehyde

3-hydroxyanthranilate

(2Z,4E)-2-amino-6-oxohexa-2,4-dienoate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

1,5-anhydro-D-fructose

1,5-anhydro-D-glucitol

1-O-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol 3-phosphate

3-oxopropanoate

(R)-2,3-dihydroxy-3-methylpentanoate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

H₂

5-oxo-L-proline

H₂O

4-hydroxy-2-nonenal

hydroxypyruvate

5-amino-6-(5-phospho-D-ribosylamino)uracil

CO₂

5-amino-6-(5-phospho-D-ribitylamino)uracil

(3S,5S)-3,5-diaminohexanoate

(S)-5-amino-3-oxohexanoate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

N-Formyl-L-kynurenine

4-amino-2-methyl-5-pyrimidinemethanol

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

glutathioselenol

selenodiglutathione

adipate

6-oxohexanoate

6-aminohexanoate cyclic dimer

coproporphyrinogen III

3'-ketosucrose

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

7,8-diaminopelargonate

(S)-2-amino-6-oxohexanoate

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

urea

N⁵-carboxyaminoimidazole ribonucleotide

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

3-deoxy-α-D-manno-2-octulosonate

3-deoxy-D-manno-octulosonate 8-phosphate

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

citrate

oxaloacetate

butanoyl phosphate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

N-ethylammelide

4-pyridoxolactone

glycolate

2-phosphoglycolate

nicotinate adenine dinucleotide

4-aminobutanoate

hydrogen peroxide

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-L,L-2,6-diaminopimelate

ammonia

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

chloroacetaldehyde

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

3-hydroxy-2-methylpyridine-5-carboxylate

(2Z)-2-(acetamidomethylene)succinate

L-gulono-1,4-lactone

L-xylo-hex-3-ulono-1,4-lactone

α-D-galacturonate 1-phosphate

1-piperideine 6-carboxylate

4-oxoglutaramate

4-oxalocrotonate

bisorganyltrisulfane

5-hydroxyindole thiazolidine carboxylate

picolinate

L-dehydro-ascorbate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

(2E,6E)-farnesyl diphosphate

pristanate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphocholine

choline

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

agmatine

spermidine

dehydrospermidine

putrescine

spermine

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

4-methylphenol

L-homocysteine

2-iminobutanoate

2-iminosuccinate

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

L-cysteinylglycine

L-alanyl-L-glutamate

L-alanyl-D-glutamate

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

hydrogensulfite

hydrogencarbonate

superoxide

phosphate

triphosphate

diphosphate

bromide

chloride

Fe³⁺

K⁺

H⁺

ammonium

Mg²⁺

Fe²⁺

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

S-methyl-L-methionine

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

3-sulfocatechol

3-sulfopyruvate

L-cysteate

orthanilate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

3-(methylsulfanyl)propanoate

methanethiol

S-sulfanylglutathione

2-nitrobenzoate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

hypoglycin B

L-kynurenine

L-2-aminoadipate

L-α-amino-ε-keto-pimelate

L-cysteine

L-serine

L-threonine

glycine

L-tyrosine

L-glutamine

L-asparagine

L-glutamate

L-aspartate

L-arginine

L-histidine

L-lysine

L-valine

L-leucine

L-phenylalanine

L-selenocysteine

L-proline

L-tryptophan

L-alanine

L-isoleucine

L-methionine

L-ornithine

L-aspartyl-4-phosphate

L-cystathionine

L,L-diaminopimelate

L-isoglutamine

N-carbamoyl-L-aspartate

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

N-(octanoyl)-L-homoserine

N-(3-oxohexanoyl)-L-homoserine

N-(butyryl)-L-homoserine

N-(3-oxododecanoyl)-L-homoserine

N-(3-hydroxybutanoyl)-L-homoserine

N-(3-oxooctanoyl)-L-homoserine

L-citrulline

L-aspartate 4-semialdehyde

L-homoserine

L-glutamate-5-semialdehyde

O-phospho-L-homoserine

hypoglycin A

S-sulfo-L-cysteine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-4-hydroxyglutamate semialdehyde

L-allo-threonine

meso-diaminopimelate

D-glutamate

β-alanine

(S)-3-amino-2-methylpropanoate

L-2-amino-3-oxobutanoate

L-saccharopine

sarcosine

3-phospho-L-serine

O-acetyl-L-homoserine

3-hydroxy-L-kynurenine

N-acetyl-L-glutamate

D-alanine

D-lysine

D-aspartate

hydroxyl radical

monodehydroascorbate radical

13(S)-HPOTE

guanosine 2',3'-cyclic monophosphate

adenosine 2',3'-cyclic monophosphate

GDP

GMP

IMP

XMP

dGDP

dGTP

dADP

dATP

dGMP

2'-deoxyguanosine

dAMP

2'-deoxyadenosine

adenylo-succinate

hypoxanthine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

2'-deoxyinosine

cyclic-GMP

IDP

ITP

dITP

dIDP

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

ppGpp

pppGpp

dIMP

XTP

adenosine 3'-monophosphate

guanosine 3'-monophosphate

ADP

ATP

cyclic-AMP

GTP

AMP

5'-deoxyadenosine

isoguanine

8-oxo-dGTP

8-oxo-GTP

ADP-α-D-glucose

GDP-α-D-mannose

GDP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-rhamnose

5'-deoxy-5'-fluoroadenosine

NADP⁺

NAD⁺

NADPH

NADH

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

CDP-α-tyvelose

CDP-α-D-paratose

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

UDP-α-D-glucose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

preQ₁

adenine

guanine

uracil

thymine

cytidine-3'-monophosphate

uridine 3'-monophosphate

cyclic di-3',5'-guanylate

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

dTMP

dUMP

dCMP

dTDP

dUDP

dCDP

dUTP

dTTP

dCTP

UDP

CDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

CTP

UTP

CMP

UMP

2-hydroxy-dATP

5-hydroxy-CTP

2'-deoxyuridine

thymidine

2'-deoxycytidine

guanosine

inosine

xanthosine

adenosine

cytidine

uridine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

D-gluconate

L-gulonate

aldehydo-L-galactonate

1-(β-D ribofuranosyl)nicotinamide

cellotetraose

β-D-cellobiose

maltotriose

α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

sucrose

α-maltose

α,α-trehalose

maltotetraose

maltopentaose

maltohexaose

maltoheptaose

aldehydo-D-galacturonate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

3-dehydro-D-glucopyranose

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

L-fuculose 1-phosphate

α-D-galactose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

lotaustralin

linamarin

neolinustatin

linustatin

taxiphyllin

glycerol

D-sorbitol

galactitol

β-D-fructofuranose

1,5-anhydro-D-mannitol

keto-L-sorbose

keto-D-fructose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

D-glyceraldehyde

L-glyceraldehyde

glycolaldehyde

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

L-sorbosone

D-xylulose

L-sorbosone 2,6-lactone

L-sorbosone 1,4-lactone

salicylaldehyde

trans-resveratrol

betanidin quinone

betanidin

4-methylumbelliferone

scopoletin

coumarin

apo-4'-lycopenal

zeaxanthin bis(β-D-glucoside)

zeaxanthin-β-D-glucoside

torulene

4'-apo-β-carotenal

α-carotene

all-trans-phytoene

all-trans-3,4-didehydrolycopene

all-trans phytofluene

15-cis-phytoene

zeinoxanthin

zeaxanthin

apo-4'-lycopenoate

all-trans-retinol

all-trans-retinyl palmitate

(3S)-2,3-epoxy-2,3-dihydrosqualene

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

puromycin

penicillin N

isopenicillin N

(5E)-3-oxo-dodec-5-enoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(2E,5E)-dodeca-2,5-dienoyl-CoA

2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

(3E)-dec-3-enoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

4-trans-undecenoyl-CoA

4-cis-undecenoyl-CoA

dioleoyl phosphatidate

1-oleoyl-2-lyso-glycerone phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

di-trans,octa-cis-undecaprenyl phosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenol

(E)-2-hexenol

myo-inositol

1D-myo-inositol 3-monophosphate

phytate

D-myo-inositol (1,2,3,5,6) pentakisphosphate

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

D-myo-inositol (1,2,3,4,5)-pentakisphosphate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

2,3-dihydroxybenzoate

protocatechuate

phytol

propan-1-ol

ethanol

butan-1-ol

methanol

fluoroacetaldehyde

methylglyoxal

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

(E)-2-hexenal

phytenal

(S)-lactaldehyde

acetaldehyde

1-octanal

formaldehyde

isobutanal

1-propanal

butan-1-al

diacetyl

isoliquiritigenin

2',4,4',6'-tetrahydroxychalcone

2,5-dichloro-p-quinone

Reactive Blue 5

a coenzyme-A group

3-oxooctanoate

3-oxo-dodecanoate

butanoate

palmitate

octanoate

decanoate

stearate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(3E,5Z)-tetradecadienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

linoleate

oleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

γ-linolenate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

3-oxohexanoate

3-oxoadipate

acetate

pyruvate

formate

propanoate

(S)-lactate

(R)-lactate

4-coumarate

(R)-glycerate

(R)-2-hydroxyglutarate

(R)-3-hydroxybutanoate

3-carboxy-cis,cis-muconate

cis-aconitate

D-threo-isocitrate

chorismate

(3E)-2-oxohex-3-enedioate

fumarate

succinate

(S)-malate

glyoxylate

4-(methylsulfanyl)-2-oxobutanoate

2-oxoglutarate

2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

4-aminobenzoate

benzoate

(R)-pantoate

orotate

allantoate

fluoroacetate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

4-tyrosol

urate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

toluene

4-hydroxybenzoate

2-hydroxylaminobenzoate

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

2,5-dichloro-p-quinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

3-demethylubiquinol-8

demethylmenaquinol-8

menaquinol-8

ubiquinol-8

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

6-isobutyl-4-hydroxy-2-pyrone

coumarinate

trans-caffeate

(2R,3S,4S)-leucocyanidin

(2R,3S,4S)-leucopelargonidin

(+)-taxifolin

(+)-dihydrokaempferol

6,7-dehydrobaicalein

baicalein

2,5-dichlorophenol

acrylonitrile

(indole-3-yl)acetonitrile

hydrogen cyanide

preQ₀

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

7,8-dihydrolumazine

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

7,8-dihydroneopterin 2',3'-cyclic phosphate

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydropterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-phosphate

thio-molybdenum cofactor

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

FMN

riboflavin

FAD

FMNH₂

reduced riboflavin

FADH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

2-hydroxychromene-2-carboxylate

cob(I)alamin

adenosylcobalamin

thiamine

L-ascorbate

nicotinate

nicotinamide

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine

pyridoxamine

pyridoxal

4-pyridoxate

(R)-lipoate

coenzyme A

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

5,10-methenyltetrahydrofolate mono-L-glutamate

(R)-NADHX

(S)-NADHX

isovaleryl-CoA

dihydro-4-coumaroyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

2-methylacetoacetyl-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

(2E,5Z)-tetradecenoyl-CoA

methylacrylyl-CoA

trans-caffeoyl-CoA

(+)-7-epi-jasmonoyl-CoA

dihomo γ-linolenoyl-CoA

(25S)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(25R)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(25R)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

3'-dephospho-CoA

isobutanoyl-CoA

itaconyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

(R)-2-hydroxyglutaryl-CoA

(E)-glutaconyl-CoA

acryloyl-CoA

β-alanyl-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

benzoyl-CoA

chenodeoxycholoyl-CoA

choloyl-CoA

3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA

(S)-3-aminobutanoyl-CoA

malonyl-CoA

phenylacetyl-CoA

acetyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

2-methylbutanoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

γ-linolenoyl-CoA

succinyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

hexadecanedioyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

hexanoyl-CoA

lauroyl-CoA

octanoyl-CoA

decanoyl-CoA

propanoyl-CoA

butanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(E)-cinnamoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

trans-dienelactone

cis-dienelactone

L-galactono-1,4-lactone

AAI-1

VAI-1-2

VAI-1

PAI-1-2

HAI-1

PAI-1

L-homoserine lactone

D-glucono-1,5-lactone

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

estrone

ethene

(+)-7-epi-jasmonate

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

phenylacetate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3-β-hydroxyandrost-5-en-17-one

cholate

glycocholate

isocholate

3-dehydrocholate

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

2-chloroacetate

S⁰

hydrogen sulfide

oxygen

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

uroporphyrinogen-III

coproporphyrinogen I

uroporphyrinogen-I

protoporphyrin IX

Mg-protoporphyrin

magnesium-protoporphyrin IX 13-monomethyl ester

protoporphyrinogen IX

(Z,Z)-biliverdin-IX α

protoheme

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-4-imidazolecarboxyamide

(S)-(+)-allantoin

6-caprolactam

acetamide

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

bromochloromethane