an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2S)-lactyl-2-diphospho-5'-guanosine

2-keto-D-gluconate

2-dehydro-6-phospho-D-gluconate

selenodiglutathione

glutathioselenol

lipid IV_A

pseudouridine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

2-amino-3-carboxymuconate-6-semialdehyde

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

mesaconate

L-histidinol phosphate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

4-imidazolone-5-propanoate

urocanate

4-amino-2-methyl-5-pyrimidinemethanol

propan-2-ol

xanthine

1,6-anhydro-N-acetyl-β-muramate

5,6-dimethylbenzimidazole

dialurate

5-amino-6-(5-phospho-D-ribitylamino)uracil

M_LPS

core oligosaccharide-lipid A (E. coli K-12 core type)

coenzyme F₃₉₀-A

L-selenocystathionine

pimeloyl-CoA

8-amino-7-oxononanoate

octadecanal

carbonic acid

3-keto-β-D-galactose

luteolin 7-O-[β-D-glucosyluronate-(1,2)-β-D-glucosiduronate]-4'-O-β-D-glucosiduronate

luteolin 7-O-β-D-glucuronide

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

(lipoyl)adenylate

(R)-4'-phosphopantothenoyl-L-cysteine

S-adenosyl 3-(methylsulfanyl)propylamine

(L-seryl)adenylate

(2,3-dihydroxybenzoyl)adenylate

imidazole acetaldehyde

4-imidazoleacetate

5-hydroxyindole acetate

3,4-dihydroxyphenylacetaldehyde

prop-2-ynal

propynoate

D-glucurono-6,3-lactone

4-acetamidobutanal

4-acetamidobutanoate

dimethylsulfoniopropanoate

N-(2,3-dihydroxybenzoyl)-L-serine trimer

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

acrylamide

acrylate

4-guanidinobutanoate

(indol-3-yl)acetamide

propionamide

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

luteolin 7-O-β-D-diglucuronide

5-oxo-L-proline

4-aminobutanoate

2-methylbutanol

2-oxopent-4-enoate

phosphite

(S)-4-hydroxy-2-oxopentanoate

(E)-4-coumaroyl-CoA

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

2,3-didehydroadipyl-CoA

glycolate

hydroxypyruvate

2-O-(6-phospho-α-D-mannosyl)-D-glycerate

2-oleoylglycerol

(S)-ureidoglycolate

formamide

hop-22(29)-ene

2-maleylacetate

ADP-L-glycero-β-D-manno-heptose

N-acetyl-D-muramate 6-phosphate

N²-succinylglutamate

urea

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

primary fluorescent chlorophyll catabolite

serotonin O-sulfate

3-methoxy-4-hydroxyphenylglycolaldehyde

3-methylbutanol

5-hydroxytryptophol sulfate

6-hydroxymelatonin

indole-3-glycol

N-acetyl-serotonin sulfate

6-sulfatoxymelatonin

indole-3-glycol aldehyde

isobutanol

dopamine 3-O-sulfate

3-methylbutanal

2-methylbutanal

2-phenylethanol

4-hydroxy-2-nonenal

acetoacetate

hydrogenobyrinate

2-(α-hydroxyethyl)thiamine diphosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

5-methylcytosine

(R)-4'-phosphopantothenate

(R)-pantothenate

thiamine phosphate

thiamine diphosphate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4S)-4-hydroxy-2-oxoheptanedioate

carbon monoxide

S-formylglutathione

salicyl alcohol

methylsalicylate

7,8-diaminopelargonate

2-succinylbenzoate

β-D-fructose 2,6-bisphosphate

N⁵-carboxyaminoimidazole ribonucleotide

DNA without lesion

31-O-desmethylFK-506

FK-506

ethanolamine

nitrilotriacetate

iminodiacetate

4-guanidinobutyramide

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

glutathione disulfide

5-phospho-β-D-ribosylamine

anthranilate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

N-(5-phosphoribosyl)-anthranilate

propane-1,3-diamine

sym-homospermidine

(R)-1-aminopropan-2-ol

(2-hydroxyphenyl)acetate

homogentisate

5-aminolevulinate

N¹-(5-phospho-β-D-ribosyl)glycinamide

porphobilinogen

preuroporphyrinogen

D-gluconate 6-phosphate

(S)-dihydroorotate

(S)-3-methyl-2-oxopentanoate

quinolinate

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

3-phosphooxypyruvate

β-D-ribosylnicotinate

4-amino-4-deoxychorismate

isopentenyl diphosphate

prenyl diphosphate

carbamoyl phosphate

squalene

presqualene diphosphate

2-dehydropantoate

pseudouridine 5'-phosphate

orotidine 5'-phosphate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

lipid X

lipid A disaccharide (E. coli)

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

prephytoene diphosphate

α-D-glucosamine 1-phosphate

O-ureido-L-homoserine

adenosine 3',5'-bisphosphate

3'-phosphoadenylyl-sulfate

dethiobiotin

L-arogenate

acetyl phosphate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

ManNAc-GlcNAc-PP-undecaprenol

5-deoxy-α-ribose 1-phosphate

S-methyl-5'-thioadenosine

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

L-gulono-1,4-lactone

shikimate

shikimate 3-phosphate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

hydrogenobyrinate a,c-diamide

α-ribazole

α-ribazole 5'-phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

citrate

6-phospho D-glucono-1,5-lactone

5-enolpyruvoyl-shikimate 3-phosphate

5-amino-6-(D-ribitylamino)uracil

7,8-didemethyl-8-hydroxy-5-deazariboflavin

oxalate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

(R)-1-amino-2-propanol O-2-phosphate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

3-methyl-2-oxobutanoate

2-iminoacetate

N-ethylglycine

ethylamine

methylamine

hydrogen peroxide

3-deoxy-D-arabino-heptulosonate 7-phosphate

5-amino-6-(5-phospho-D-ribosylamino)uracil

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

4'-phosphopantetheine

(S)-4-amino-5-oxopentanoate

(S)-2,3,4,5-tetrahydrodipicolinate

prephenate

2-C-methyl-D-erythritol 4-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

canavaninosuccinate

L-canavanine

L-arginino-succinate

histidinal

histidinol

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

H₂

hydrogen selenide

O-acetyl-L-serine

1-deoxy-L-glycero-tetrulose 4-phosphate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

oxaloacetate

phosphoenolpyruvate

oxalosuccinate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

isochorismate

1,4-dihydroxy-2-naphthoyl-CoA

1,4-dihydroxy-2-naphthoate

β-nicotinate D-ribonucleotide

nicotinate adenine dinucleotide

γ-L-glutamyl 5-phosphate

coproporphyrinogen III

CO₂

glycerone phosphate

3-dehydroquinate

H₂O

3-dehydroshikimate

bisorganyltrisulfane

enol-phenylpyruvate

5-hydroxyindole thiazolidine carboxylate

ammonia

4-oxoglutaramate

(4-hydroxyphenyl)acetate

2-iminopropanoate

2-iminobutanoate

2-iminosuccinate

cyanophycin primer-L-aspartate

cyanophycin primer

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

4-methylphenol

L-homocysteine

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

phenylacetate

ethylphosphate

cobalt-factor III

cobalt-precorrin-3

cobalt-sirohydrochlorin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

cobalt-precorrin-4

cobalt-precorrin-5A

cob(II)yrinate c-monoamide

cobyrinate

3,8-divinyl chlorophyllide a

cob(I)yrinate a,c-diamide

cob(I)alamin

cob(I)inamide

chlorophyll a

adenosylcobinamide

adenosyl-cobinamide phosphate

Mg-protoporphyrin

chlorophyllide a

protochlorophyllide a

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

magnesium-protoporphyrin IX 13-monomethyl ester

cob(II)yrinate a,c-diamide

adenosylcobalamin

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobyrate

protoheme

N₂

protoporphyrin IX

protoporphyrinogen IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

siroheme

red chlorophyll catabolite

(Z,Z)-biliverdin-IX α

(2R,3Z)-phycocyanobilin

oxygen

hydrogen sulfide

sn-glycerol 3-phosphate

2,3-diphospho-D-glycerate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2S)-2-phospholactate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

N-acetyl-D-mannosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

1-oleoyl-2-lyso-glycerone phosphate

(S)-citramalate

(S)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

2-octaprenylphenol

13(S)-HPOTE

hydroxyl radical

superoxide

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

dimethyl sulfide

3-dimethylsulfoniopropionaldehyde

3-(methylsulfanyl)propanal

methionol

S-(hydroxymethyl)glutathione

glutathione

methanethiol

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

3-sulfopyruvate

L-cysteate

(2R)-3-sulfolactate

(2R)-phospho-3-sulfolactate

(R)-S-lactoylglutathione

Fe³⁺

K⁺

H⁺

ammonium

Mo²⁺

Mn²⁺

Cu²⁺

Zn²⁺

Fe²⁺

Mg²⁺

Co²⁺

trimethyl sulfonium

OH^-

selenite

selenide

selenate

nitrate

nitrite

sulfite

thiosulfate

hydrogencarbonate

molybdate

sulfate

hydrogensulfite

phosphonate

phosphate

triphosphate

diphosphate

chloride

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

cadaverine

spermidine

putrescine

choline

glycine betaine

N-acetyl-serotonin

serotonin

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphocholine

sn-glycero-3-phosphoethanolamine

thyroxine sulfate

3,5,3'-triiodo-L-thyronine

triiodothyronine sulfate

L-thyroxine

acetamide

5-amino-4-imidazolecarboxyamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

nicotinamide

ethene

heptadecane

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

2-methylbutanoyl-CoA

2-methylacetoacetyl-CoA

phenylacetyl-CoA

methylacrylyl-CoA

(2E,5Z)-tetradecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(E)-2-methylcrotonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

(3E)-undec-2-enoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

succinyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

3'-dephospho-CoA

acetyl-CoA

malonyl-CoA

crotonyl-CoA

(2E)-octadec-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

phytanoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

propanoyl-CoA

decanoyl-CoA

octanoyl-CoA

palmitoyl-CoA

2-hydroxyphytanoyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

all-trans-retinyl palmitate

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

FAD

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

phylloquinol

caldariellaquinol

menaquinol-13

menaquinol-12

menaquinol-11

menaquinol-10

menaquinol-6

menaquinol-9

menaquinol-7

menaquinol-8

demethylmenaquinol-13

demethylmenaquinol-12

demethylmenaquinol-11

demethylmenaquinol-10

demethylmenaquinol-6

demethylmenaquinol-9

demethylmenaquinol-7

demethylmenaquinol-8

caldariellaquinone

(R)-lipoate

molybdopterin

coenzyme A

oxidized coenzyme F₄₂₀-0

oxidized coenzyme F₄₂₀-2

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

thiamine

nicotinate

riboflavin

pyridoxamine

pyridoxal

pyridoxine

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

δ-tocotrienol

γ-tocotrienol

β-tocopherol

α-tocopherol

γ-tocopherol

δ-tocopherol

menadione

all-trans-retinol

(S)-1-pyrroline-5-carboxylate

precorrin-3A

precorrin-1

precorrin-2

precorrin-3B

precorrin-7

precorrin-8x

precorrin-6B

precorrin-6A

precorrin-4

precorrin-5

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

cyclic pyranopterin phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

molybdopterin adenine dinucleotide

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

adenine

guanine

2'-deoxyguanosine

2'-deoxyadenosine

2'-deoxyinosine

xanthosine

guanosine

inosine

adenosine

hypoxanthine

dAMP

dGMP

dIMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

XMP

IMP

GMP

AMP

XTP

ITP

GTP

ATP

dUMP

dCMP

cytosine

uridine 3'-monophosphate

cytidine-3'-monophosphate

dTMP

orotate

uracil

UTP

dUDP

dUTP

dTDP

dCDP

dCTP

CDP

CTP

UDP

dTTP

UDP-α-D-galactofuranose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-sulfoquinovopyranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-glucose

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

CDP-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

5-fluorouracil

uridine

cytidine

thymine

CMP

UMP

isoguanine

N¹-methyladenine

N3-methylcytosine

N¹-ethyladenine

preQ₁

2',4,4',6'-tetrahydroxychalcone

baicalein

6,7-dehydrobaicalein

luteolin

preQ₀

salicylaldehyde

urate

4-tyrosol

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

4-hydroxybenzoate

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

demethylphylloquinol

2-methyl-6-geranylgeranyl-1,4-benzoquinol

2,3-dimethyl-6-geranylgeranyl-1,4-benzoquinol

2,3-dimethyl-6-phytyl-1,4-benzoquinol

2-methyl-6-phytyl-1,4-benzoquinol

3,4-dihydroxymandelate

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

dopamine

enterobactin

salicylate

benzoate

4-aminobenzoate

crocetin

chorismate

L-aspartate

succinate

fumarate

(S)-malate

D-glucarate

(2R)-homocitrate

cis-aconitate

cis-homoaconitate

D-threo-isocitrate

(S)-lactate

(R)-lactate

propanoate

acetate

formate

pyruvate

decanoate

octanoate

(2E,6E)-farnesoate

oleate

(3E,5Z)-tetradecadienoate

γ-linolenate

linoleate

α-linolenate

phytenate

palmitate

(R)-pantoate

D-gluconate

β-D-glucuronate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

4-(methylsulfanyl)-2-oxobutanoate

2-oxobutanoate

glyoxylate

2-oxoglutarate

L-α-amino-ε-keto-pimelate

L-serine

β-alanine

L-leucine

glycine

L-proline

L-glutamine

L-alanine

D-glutamate

L-glutamate

L-arginine

L-histidine

L-lysine

L-threonine

L-tyrosine

L-asparagine

L-cysteine

L-tryptophan

L-phenylalanine

D-alanine

seleno-L-homocysteine

L-aspartyl-4-phosphate

L-threonine 3-O-phosphate

3-phospho-L-serine

sarcosine

(2S, 3S)-3-methylaspartate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

O-acetyl-L-homoserine

L-proline betaine

L-citrulline

L-isoleucine

L-valine

O-succinyl-L-homoserine

1-aminocyclopropane-1-carboxylate

hypoglycin A

L-ornithine

O-phospho-L-homoserine

L-homoserine

L-aspartate 4-semialdehyde

S-sulfo-L-cysteine

L-glutamate-5-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-4-hydroxyglutamate semialdehyde

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-methionine

L-cystathionine

L-2,4-diaminobutanoate

L,L-diaminopimelate

L-isoglutamine

methylglyoxal

diacetyl

acetone

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

(2E,6E)-farnesal

glycolaldehyde

crocetin dialdehyde

butan-1-al

1-octanal

formaldehyde

1-propanal

isobutanal

acetaldehyde

(S)-lactaldehyde

phytenal

(E)-2-hexenal

D-glyceraldehyde

L-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

α-D-galactopyranose

β-D-galactopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

(E)-2-pentenal

(E)-2-hexenol

butan-1-ol

propan-1-ol

ethanol

methanol

phytol

(E)-2-pentenol

glycerol

(3S)-linalool

(3R)-linalool

(2E,6E)-farnesol

myo-inositol

phytate

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

1-oleoyl-sn-glycerol 3-phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

dioleoyl phosphatidate

δ-cuprenene

9,9'-di-cis-ζ-carotene

all-trans-phytoene

prolycopene

all-trans phytofluene

9,15,9'-tri-cis-ζ-carotene

15-cis-phytoene

all-trans neurosporene

all-trans-lycopene

all-trans-ζ-carotene

geranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

(S)-β-bisabolene

(-)-β-caryophyllene

α-humulene

α-copaene

(+)-α-barbatene

(+)-thujopsene

isobazzanene

(+)-β-barbatene

(E)-β-farnesene

β-acoradiene

(+)-β-chamigrene

α-zingiberene

(-)-α-cuprenene

α-chamigrene

β-sesquiphellandrene

(-)-β-elemene

(2E,6E)-farnesyl diphosphate

(-)-cuparene

phytyl diphosphate

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-heptaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

heptosyl-Kdo₂-lipid A

(heptosyl)₂-Kdo₂-lipid A

betanidin

betanidin quinone

ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex

1-(β-D ribofuranosyl)nicotinamide

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

maltotriose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

allolactose

sucrose

α-lactose

colanic acid

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

β-D-fructofuranose

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^G-phosphate

sucrose 6^F-phosphate

ADP-α-D-glucose

GDP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 1,7-bisphosphate

D-sedoheptulose 7-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose-1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

L-gulonate

ppGpp

pppGpp

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

adenosine 3'-monophosphate

guanosine 3'-monophosphate

adenylo-succinate

5'-deoxyadenosine

8-oxo-GTP

8-oxo-dGTP

5-fluorocytosine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

2-hydroxy-dATP

5-hydroxy-CTP

β-nicotinamide D-ribonucleotide

cyclic di-3',5'-guanylate

hypoglycin B