an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

phosphoenolpyruvate

3-deoxy-α-D-manno-2-octulosonate

3-deoxy-D-manno-octulosonate 8-phosphate

H₂O

2-amino-2-deoxy-D-gluconate 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-muramate 6-phosphate

glycerone phosphate

N-acetyl-D-galactosamine 6-phosphate

CO₂

aminoacetone

3-dehydroshikimate

shikimate

coproporphyrinogen III

formate

oxaloacetate

citrate

5-amino-6-(D-ribitylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

thiamine diphosphate

thiamine phosphate

acetoacetate

ethanolamine

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

2-maleylacetate

D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

adenosine 3',5'-bisphosphate

3-amino-1-hydroxyacetone 1-phosphate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

methylamine

N-acetyl-β-glucosaminylamine

N⁴-(β-N-acetyl-D-glucosaminyl)-L-asparagine

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropylmalate

3-methyl-2-oxobutanoate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

O-acetyl-L-serine

3-keto-β-D-galactose

3'-phosphoadenylyl-sulfate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

dethiobiotin

7,8-diaminopelargonate

8-amino-7-oxononanoate

pimeloyl-CoA

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

(S)-4-amino-5-oxopentanoate

betaine aldehyde

choline

2-dehydro-3-deoxy-D-galactonate

hydrogen peroxide

3-methoxy-4-hydroxyphenylglycolaldehyde

tryptamine

5-hydroxyindole acetaldehyde

3,4-dihydroxyphenylacetaldehyde

4-acetamidobutanal

5-methoxyindoleacetaldehyde

5-methoxytryptamine

tartronate semialdehyde

hydroxypyruvate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

glycolate

2-phosphoglycolate

4-phosphooxy-L-threonine

3-phosphooxypyruvate

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

orotidine 5'-phosphate

hexulose 6-phosphate

(2Z,4E)-2-amino-6-oxohexa-2,4-dienoate

2-amino-3-carboxymuconate-6-semialdehyde

ethylamine

N-isopropylammelide

hydroxyatrazine

carboxyphosphate

carbamoyl phosphate

4-hydroxy-2-nonenal

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

preuroporphyrinogen

porphobilinogen

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine

N-ethylglycine

2-iminoacetate

hydrogen selenide

isoquinolin-2(1H)-one

isoquinoline

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

quinolinate

β-nicotinate D-ribonucleotide

lipid A disaccharide (E. coli)

lipid X

2-C-methyl-D-erythritol 4-phosphate

isopentenyl diphosphate

nicotinate adenine dinucleotide

(S)-4-hydroxy-2-oxopentanoate

4-acetamidobutanoate

(2E)-hexadecenal

D-glucurono-6,3-lactone

4-imidazoleacetate

imidazole acetaldehyde

dimethylsulfoniopropanoate

palmitaldehyde

propynoate

prop-2-ynal

5-hydroxyindole acetate

prephenate

hydrogenobyrinate a,c-diamide

glutathionylspermidine

anthranilate

N-(5-phosphoribosyl)-anthranilate

1,6-anhydro-N-acetyl-β-muramate

4-fumaryl-acetoacetate

4-maleyl-acetoacetate

homogentisate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

5-aminolevulinate

N⁵-carboxyaminoimidazole ribonucleotide

4'-phosphopantetheine

4-amino-4-deoxychorismate

(S)-3-methyl-2-oxopentanoate

β-D-ribosylnicotinate

(S)-dihydroorotate

oxalosuccinate

xanthine

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

urocanate

4-imidazolone-5-propanoate

formamide

6-phospho D-glucono-1,5-lactone

L-canavanine

canavaninosuccinate

L-arginino-succinate

O-ureido-L-homoserine

4-aminobutanoate

(R)-pantothenate

2-dehydropantoate

N-carbamoylputrescine

prenyl diphosphate

cyanate

urea

chloramphenicol

2-dehydro-3-deoxy-D-galactonate 6-phosphate

γ-L-glutamyl 5-phosphate

2,5-didehydro-D-gluconate

2-keto-D-gluconate

N-methylhydantoin

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

5-oxo-L-proline

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

L-histidinol phosphate

imidazole acetol-phosphate

histidinol

histidinal

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

α-D-glucosamine 1-phosphate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

(R)-2,3-dihydroxy-3-methylpentanoate

carbonic acid

salicyl alcohol

methylsalicylate

selenophosphate

phosphonoacetate

lipid IV_A

(R)-4'-phosphopantothenoyl-L-cysteine

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

trans-O-hydroxybenzylidenepyruvate

3-hydroxyanthranilate

DNA without lesion

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

4-methylgentisate

3-methylgentisate

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

4-prenylphlorisobutyrophenone

citraconate

2-isopropylmaleate

succinate semialdehyde

4,5-seco-dopa

L-gulono-1,4-lactone

L-dehydro-ascorbate

3'-ketosucrose

mercuriphenyl acetate

N-ethylsuccinimide

N-ethylmaleimide

3-deoxy-D-glycero-2,5-hexodiulosonate

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

4-carboxy-2-hydroxymuconate-6-semialdehyde

2-pyrone-4,6-dicarboxylate

3-mercaptopyruvate

N-acetyl-L-glutamate 5-semialdehyde

3-α(S)-strictosidine

secologanin

S-ribosyl-L-homocysteine

norspermidine

carboxynorspermidine

(S)-2-amino-6-oxohexanoate

D-galacto-hexodialdose

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

N-Formyl-L-kynurenine

S-formylglutathione

5'-phosphoguanylyl(3'→5')guanosine

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

(R)-4'-phosphopantothenate

(2-hydroxyphenyl)acetate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

2-oxopent-4-enoate

2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxymuconate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

2-dehydro-3-deoxy-L-rhamnonate

glutathione disulfide

3-oxopropanoate

N-acetylglutamyl-phosphate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

5-dehydro-D-gluconate

2-keto-L-gulonate

N-succinyl-L,L-2,6-diaminopimelate

γ-butyrobetaine

D-erythro-imidazole-glycerol-phosphate

(R)-mandelate

(S)-mandelate

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

α-ribazole

(R)-1-amino-2-propanol O-2-phosphate

cyclopentanone

cyclopentanol

S-Inosyl-L-homocysteine

S-methyl-5'-thioinosine

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

L-rhamnonate

L-rhamnono-1,4-lactone

2-dehydro-3-deoxy-L-galactonate

3-hydroxypropanoate

acrylate

autoinducer 2

(4-hydroxyphenyl)acetate

(2E)-2-methyl-4,6-dioxohept-2-enedioate

(2E)-3-methyl-4,6-dioxohept-2-enedioate

3-hydroxy-4-methylbenzaldehyde

5-(hydroxymethyl)-2-methylphenol

selenodiglutathione

creatinine

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

hydrogenobyrinate

octopamine

(R)-synephrine

5-amino-6-(5-phospho-D-ribitylamino)uracil

glutathioselenol

(L-seryl)adenylate

isopropylamine

dialurate

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

(2,3-dihydroxybenzoyl)adenylate

4-oxoglutaramate

1-piperideine 6-carboxylate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

betaine aldehyde hydrate

picolinate

1,2-dihydro-β-NADP

cyclic-2,3-O-oxalyl-L-threonate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

ammonia

(2E)-2-hydroxypenta-2,4-dienoate

4-oxalocrotonate

5-hydroxyindole thiazolidine carboxylate

dehydroascorbate (bicyclic form)

(3E)-2-oxopent-3-enoate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic- 3,4-O-oxalyl-L-threonate

bisorganyltrisulfane

2,3-dioxo-L-gulonate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

L-cysteinylglycine

L-alanyl-L-glutamate

L-alanyl-D-glutamate

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

hypoglycin B

carbamate

L-kynurenine

L-2-aminoadipate

L-α-amino-ε-keto-pimelate

L-citrulline

L-threonine

glycine

L-proline

L-serine

L-aspartate

L-glutamate

L-glutamine

L-asparagine

L-tryptophan

L-phenylalanine

L-alanine

L-lysine

L-arginine

L-valine

L-histidine

L-isoleucine

L-tyrosine

L-leucine

L-cysteine

L-methionine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-homocysteine

L-aspartate 4-semialdehyde

L-ornithine

O-phospho-L-homoserine

S-sulfo-L-cysteine

O-succinyl-L-homoserine

L-homoserine

hypoglycin A

L-glutamate-5-semialdehyde

L-dopa

L-cystine

L-canaline

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-selenocysteine

meso-diaminopimelate

L-2-amino-3-oxobutanoate

L-aspartyl-4-phosphate

L-saccharopine

L-selenomethionine

seleno-L-homocysteine

S-sulfanyl-L-cysteine

O-acetyl-L-homoserine

trans-4-hydroxy-L-proline

5-hydroxy-L-tryptophan

3-hydroxy-L-kynurenine

sarcosine

L-threonine 3-O-phosphate

3-phospho-L-serine

N-acetyl-L-methionine

N-acetyl-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-aspartate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-carbamoyl-L-aspartate

L,L-diaminopimelate

L-cystathionine

L-isoglutamine

D-glutamate

D-alanine

D-cysteine

N-carbamoylsarcosine

β-alanine

(S)-3-amino-2-methylpropanoate

salicylate

5-chloroprotocatechuate

protocatechuate

2,3-dihydroxybenzoate

4-aminobenzoate

3-hydroxy-4-methyl-benzoate

3-hydroxy-5-methyl-benzoate

3-hydroxybenzoate

benzoate

D-gluconate

D-mannonate

acetate

orotate

(R)-pantoate

gentisate

L-carnitine

5-chloro-5-deoxy-D-ribonate

(S)-1-pyrroline-5-carboxylate

4-deoxy-L-threo-hex-4-enopyranuronate

4-deoxy-L-erythro-hex-4-enopyranuronate

pristanate

decanoate

palmitate

octanoate

laurate

butanoate

7-hydroxylaurate

stearate

phytenate

oleate

(15Z)-tetracosenoate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

(2E)-hexadecenoate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

leukotriene A₄

leukotriene-E4

leukotriene-D4

leukotriene B₄

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1,2-dicis-vaccenoyl-phosphatidate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

4-hydroxybutanoate

(R)-3-hydroxybutanoate

(2R,3S)-2-methylisocitrate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(R)-lactate

(S)-lactate

(R)-glycerate

propanoate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

pyruvate

2-oxoglutarate

glyoxylate

2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

cis-aconitate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

D-threo-isocitrate

chorismate

(3E)-2-oxohex-3-enedioate

D-glucarate

α,ω-9Z-octadecenedioate

succinate

fumarate

(S)-malate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

isopenicillin N

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

α-Kdo-(2→6)-lipid IV_A

4-O-phospho-α-Kdo8N-(2→6)-lipid IV_A

α-Kdo8N-(2→6)-lipid IV_A

4-O-phospho-α-Kdo-(2→6)-lipid IV_A

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-myristoyl phosphatidate

dioleoyl phosphatidate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

3-heptaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

(2E,6E)-farnesyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-nonaprenyl diphosphate

geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-retinyl palmitate

all-trans-retinol

tributyrin

1,2-dibutyrin

dopamine

3,4-dihydroxyphenylglycolaldehyde

(R)-adrenaline

(R)-noradrenaline

3,4-dihydroxyphenylacetate

3,4-dihydroxymandelate

3-methylcatechol

4-methylcatechol

3-sulfocatechol

catechol

ethylene glycol

(R)-propane-1,2-diol

(S)-propane-1,2-diol

myo-inositol

1D-myo-inositol 4-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 3-monophosphate

glycerol

D-sorbitol

D-mannitol

L-iditol

ethanol

butan-1-ol

phytol

methanol

glycolaldehyde

salicylaldehyde

α-D-galactopyranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

L-glyceraldehyde

methylglyoxal

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

phytenal

decanal

dodecanal

(R)-lactaldehyde

(S)-lactaldehyde

formaldehyde

acetaldehyde

isobutanal

1-octanal

butan-1-al

caldariellaquinone

diacetyl

phlorisovalerophenone

3-benzyl-3,6 -bis(cysteinyl)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

coumarin

betalamate

miraxanthin V

portulacaxanthin II

deoxyhumulone

4-prenylphlorisovalerophenone

deoxycohumulone

urate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-hydroxybenzoate

benzene

cyanuric acid

coumarinate

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-8

3-demethylubiquinol-9

3-demethylubiquinol-7

3-demethylubiquinol-10

menaquinol-8

ubiquinol-8

ubiquinol-9

ubiquinol-10

ubiquinol-7

demethylmenaquinol-8

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

tyramine

2-phenylethylamine

serotonin

7-chloro-L-tryptophan

3-chlorobenzoate

phenol

3,5-xylenol

3-(hydroxymethyl)-5-methylphenol

2,5-xylenol

3-hydroxy-5-methylbenzaldehyde

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

metanephrine

normetanephrine

vanillyl mandelate

atrazine

2-hydroxychromene-2-carboxylate

guanine

adenine

AMP

IMP

GMP

XMP

ATP

GTP

ITP

ADP

GDP

IDP

dGDP

dIDP

dADP

dGMP

dAMP

dGTP

dATP

dITP

hypoxanthine

inosine

adenosine

xanthosine

guanosine

2'-deoxyinosine

2'-deoxyadenosine

2'-deoxyguanosine

7,8-dihydrolumazine

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

(6R)-4a-hydroxy-tetrahydrobiopterin

tetrahydromethanopterin

5,6,7,8-tetrahydromonapterin

7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

7,8-dihydromonapterin triphosphate

7,8-dihydroneopterin 3'-triphosphate

molybdopterin

cyclic pyranopterin phosphate

molybdopterin adenine dinucleotide

7,8-dihydropteroate

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

cytidylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

6,7-dimethyl-8-(1-D-ribityl)lumazine

FADH₂

FMNH₂

reduced riboflavin

riboflavin

FAD

FMN

uracil

cytosine

preQ₁

isoguanine

dTMP

dUMP

dTTP

dCMP

dCTP

dUTP

UTP

CTP

CMP-N-acetyl-β-neuraminate

dCDP

UDP

CDP

dUDP

dTDP

CMP

UMP

uridine

cytidine

thymidine

2'-deoxyuridine

2'-deoxycytidine

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galactose

UDP-α-D-glucose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-glucuronate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

adenosylcobalamin

sirohydrochlorin

precorrin-2

precorrin-1

precorrin-3A

precorrin-3B

precorrin-4

precorrin-6A

precorrin-6B

precorrin-8x

precorrin-7

precorrin-5

coenzyme A

adenylo-succinate

pppGpp

ppGpp

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

8-oxo-GTP

8-oxo-dGTP

ADP-α-D-glucose

GDP-α-D-mannose

GDP-α-D-mannuronate

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

NAD⁺

NADP⁺

NADH

NADPH

CMP-3-deoxy-β-D-manno-octulosonate

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

glycine betaine

(S)-NADHX

(R)-NADHX

(indol-3-yl)acetate

phenylacetate

methyl (indol-3-yl)acetate

(+)-7-epi-jasmonate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

acetyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

3-methylglutaconyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-(4-methylpent-3-en-1-yl)-pent-2-enedioyl-CoA

cis-geranyl-CoA

3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA

2-methylacetoacetyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

malonyl-CoA

succinyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3'-dephospho-CoA

isobutanoyl-CoA

phenylacetyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

citronellyll-CoA

4-hydroxybutanoyl-CoA

dihomo γ-linolenoyl-CoA

L-carnitinyl-CoA

γ-butyrobetainyl-CoA

crotonobetainyl-CoA

acryloyl-CoA

2-methylbutanoyl-CoA

7-methyl-3-oxooct-6-enoyl-CoA

5-methylhex-4-enoyl-CoA

(2E)-5-methylhexa-2,4-dienoyl-CoA

3-hydroxy-5-methylhex-4-enoyl-CoA

5-methyl-3-oxo-4-hexenoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

phytanoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

crotonyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

3-oxoadipyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-palmitoyl-CoA

(11Z)-3-oxo-hexadecenoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

hexadecanedioyl-CoA

16-hydroxypalmitoyl-CoA

palmitoleoyl-CoA

palmitoyl-CoA

stearoyl-CoA

myristoyl-CoA

cis-vaccenoyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

lauroyl-CoA

hexanoyl-CoA

decanoyl-CoA

octanoyl-CoA

7-hydroxylauroyl-CoA

propanoyl-CoA

butanoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

18-hydroxylinoleoyl-CoA

(S)-3-hydroxytetradecanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(11Z)-(S)-3-hydroxyhexadec-11-enoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

D-glucono-1,5-lactone

cis-dienelactone

trans-dienelactone

3-dimethylsulfoniopropionaldehyde

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

thiocyanate

methanethiol

S-sulfanylglutathione

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

nitric oxide

superoxide

hydroxyl radical

nicotinate

thiamine

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

cob(I)alamin

sulfite

thiosulfate

hydrogencarbonate

nitrite

nitrate

selenate

selenide

OH^-

selenite

sulfate

molybdate

hydrogensulfite

chloride

phosphate

diphosphate

triphosphate

Fe³⁺

Cu²⁺

Hg²⁺

Co²⁺

Fe²⁺

Mg²⁺

H⁺

ammonium

2-chloroacetate

agmatine

spermidine

putrescine

N-acetylputrescine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

4-[(E)-2-(methylamino)ethenyl]phenol

4-[(Z)-2-aminoethenyl]phenol

N-acetyl-β-neuraminate

D-galactonate

L-gulonate

L-idonate

3,6-anhydro-L-galactonate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

4-phospho-D-erythronate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

α-D-glucopyranose 1-phosphate

α-D-galactose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-galactose 6-phosphate

α-D-galactose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

sucrose

4-deoxy-2-O-sulfo-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate

4-deoxy-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate

α-lactose

α,α-trehalose

maltotetraose

maltopentaose

maltohexaose

maltoheptaose

maltotriose

agarotriose

agaropentaose

neoagarohexaose

neoagarotetraose

neoagarobiose

stachyose

raffinose

XXXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

β-D-fructofuranose

keto-D-fructose

3,6-anhydro-L-galactofuranose

3,6-anhydro-α-L-galactopyranose

keto-L-sorbose

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

N-acetyl-β-D-mannosamine

N-acetyl-α-D-mannosamine

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

chloramphenicol 3-acetate

hydrogen cyanide

(indole-3-yl)acetonitrile

preQ₀

3-cyano-L-alanine

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(R)-citramalate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

ω-saturated C55 dolichol phosphate

2-O-(α-D-mannosyl)-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-O-(α-D-mannosyl)-3-phospho-D-glycerate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

sn-glycerol 1-phosphate

β-D-mannosyl-(C55 ω-saturated dolichyl phosphate)

2-iminosuccinate

2-iminobutanoate

4-[(2Z)-2-(methylimino)ethyl]phenol

4-(2-iminoethyl)phenol

oxygen

hydrogen sulfide

Hg⁰

protoporphyrinogen IX

uroporphyrinogen-III

coproporphyrinogen I

uroporphyrinogen-I

protoporphyrin IX

Mg-protoporphyrin

siroheme

protoheme

cob(II)yrinate a,c-diamide

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobinamide

cob(I)inamide

cob(I)yrinate a,c-diamide

adenosyl-cobinamide phosphate

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal