an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
2-carboxy-L-threo-pentonate
2-carboxy-L-xylonolactone
(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
bisorganyltrisulfane
2,3-dioxo-L-gulonate
cyclic- 3,4-O-oxalyl-L-threonate
enol-phenylpyruvate
(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
5-hydroxyindole thiazolidine carboxylate
ammonia
dehydroascorbate (bicyclic form)
cyclic-2,3-O-oxalyl-L-threonate
4-(β-D-ribofuranosyl)-N-succinylaminobenzene 5'-phosphate
4-(β-D-ribofuranosyl)hydroxybenzene 5'-phosphate
L-dehydro-ascorbate
α-D-galacturonate 1-phosphate
L-xylo-hex-3-ulono-1,4-lactone
L-gulono-1,4-lactone
S-ribosyl-L-homocysteine
autoinducer 2
N5-carboxyaminoimidazole ribonucleotide
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-(4-aminophenyl)-1-deoxy-5-[1-α -D- ribofuranosyl 5-phosphate]-D-ribitol
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-(4-aminophenyl)-1-deoxy-5-[1-α -D- ribofuranosyl triphosphate]-D-ribitol
(2R,3S)-3-methylmalate
citraconate
sulfoethylcysteine
2-(sulfomethyl)thiazolidine-4-carboxylate
4-amino-2-methyl-5-pyrimidinemethanol
(R)-mevalonate diphosphate
1,4-dihydroxy-2-naphthoate
dialurate
2,5-diamino-6-(5-phospho-D-ribitylamino)pyrimidin-4(3H)-one
5,6-dimethylbenzimidazole
(R)-1-amino-2-propanol O-2-phosphate
2-(α-hydroxyethyl)thiamine diphosphate
thiamine diphosphate
5-dehydro-D-gluconate
(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol
S-formylglutathione
cyclohexanol
cyclohexanone
(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate
(4Z)-2-oxohept-4-enedioate
2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA
(2S)-lactyl-2-diphospho-5'-guanosine
α-ribazole
α-ribazole 5'-phosphate
deethylsimazine
N-ethylammeline
hydroxypyruvate
S-methyl-5'-thioadenosine
S-methyl-5-thio-α-D-ribose 1-phosphate
pseudouridine 5'-phosphate
7,8-didemethyl-8-hydroxy-5-deazariboflavin
oxalate
4-amino-4-deoxychorismate
sym-homospermidine
xanthine
chloramphenicol
1-deoxy-L-glycero-tetrulose 4-phosphate
CDP-glycerol
4-aminobutanoate
β-D-galactosyl-(1→4)-N-acetyl-D-glucosamine
5-methylcytosine
atropine
tropate
tropine
β-nicotinate D-ribonucleotide
carbonic acid
5-hydroxytryptophol
5-hydroxyindole acetaldehyde
3-methoxy-4-hydroxyphenylglycolaldehyde
indole-3-glycol
indole-3-glycol aldehyde
isobutanol
3-methylbutanol
3-methylbutanal
2-methylbutanol
2-methylbutanal
2-phenylethanol
quinolinate
hydrogen selenide
5-oxo-L-proline
N-(5-phosphoribosyl)-anthranilate
anthranilate
arsenite
squalene
hop-22(29)-ene
4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine
4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine
orotidine 5'-phosphate
5-phospho-β-D-ribosylamine
3-β-hydroxyandrost-5-en-17-one 3-sulfate
estrone 3-sulfate
DNA without lesion
O-acetyl-L-serine
4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate
N1-(5-phospho-β-D-ribosyl)glycinamide
acetyl phosphate
adenosine 5'-phosphosulfate
adenosine 5'-phosphoselenate
hydrogen peroxide
(2S)-2-isopropyl-3-oxosuccinate
3-ethylmalate
2-oxovalerate
coenzyme F390-A
2-maleylacetate
L-β-lysine
urea
4-prenylphlorisobutyrophenone
3-(O-geranylgeranyl)-sn-glycerol 1-phosphate
glutathione disulfide
(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate
(4,5-dihydro-5-oxofuran-2-yl)-acetate
N2-succinyl-L-glutamate 5-semialdehyde
N2-succinylglutamate
4-acetamidobutanal
4-acetamidobutanoate
methanophenazine
dihydromethanophenazine
hydrogenobyrinate
oxalosuccinate
5-amino-6-(5-phospho-D-ribitylamino)uracil
5-amino-6-(5-phospho-D-ribosylamino)uracil
isochorismate
(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate
2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
coenzyme B
CoB-CoM heterodisulfide
(L-threonylcarbamoyl)adenylate
3-ureidopropanoate
3-dehydroshikimate
hexulose 6-phosphate
thiamine phosphate
L-histidinol phosphate
5-amino-1-(5-phospho-β-D-ribosyl)imidazole
2-isopropylmaleate
(2R,3S)-3-isopropylmalate
D-erythro-imidazole-glycerol-phosphate
imidazole acetol-phosphate
citrate
(S)-4-amino-5-oxopentanoate
5-aminolevulinate
porphobilinogen
(R)-mevalonate
(R)-5-phosphomevalonate
isopentenyl diphosphate
prenyl diphosphate
hydrogenobyrinate a,c-diamide
(S)-dihydroorotate
H2
(R)-4'-phosphopantothenate
(R)-4'-phosphopantothenoyl-L-cysteine
L-canavanine
(indol-3-yl)pyruvate
(indol-3 yl)acetyl-CoA
5-amino-6-(D-ribitylamino)uracil
oxaloacetate
N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide
2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine
O-ureido-L-homoserine
canavaninosuccinate
L-arginino-succinate
(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate
4-phosphooxy-L-threonine
3-phosphooxypyruvate
propane-1,3-diamine
preuroporphyrinogen
histidinal
histidinol
shikimate
2-phosphoglycolate
glycolate
4'-phosphopantetheine
N-acetyl-L-glutamate 5-semialdehyde
N-acetylglutamyl-phosphate
nicotinate adenine dinucleotide
(R)-2,3-dihydroxy-3-methylpentanoate
(S)-2-aceto-2-hydroxybutanoate
(S)-2-acetolactate
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
γ-L-glutamyl 5-phosphate
4-methyl-2-oxopentanoate
(S)-3-methyl-2-oxopentanoate
carbon monoxide
carbamoyl phosphate
phosphoenolpyruvate
shikimate 3-phosphate
5-enolpyruvoyl-shikimate 3-phosphate
3-deoxy-D-arabino-heptulosonate 7-phosphate
3-dehydroquinate
prephenate
CO2
glycerone phosphate
H2O
3-methyl-2-oxobutanoate
(2S)-2-isopropylmalate
(2E,6E)-farnesyl diphosphate
DNA with lesion
phenylacetate
ethylphosphate
adenosylcobalamin
cob(I)alamin
hemin
adenosyl-cobinamide phosphate
cobalt-factor III
cobalt-precorrin-3
cobalt-precorrin-7
cobalt-precorrin-8
cobalt-precorrin-6B
cobalt-precorrin-4
cobalt-precorrin-5A
cobalt-precorrin-5B
cobalt-precorrin-6A
Mg-protoporphyrin
adenosylcobinamide-GDP
adenosylcobalamin 5'-phosphate
cob(I)yrinate a,c-diamide
cob(I)inamide
adenosylcobinamide
adenosyl-cob(III)yrinate a,c-diamide
adenosylcobyrate
cob(II)yrinate c-monoamide
cobyrinate
cob(II)yrinate a,c-diamide
cobalt-precorrin-2
cobalt-sirohydrochlorin
hydrogen cyanide
N2
uroporphyrinogen-I
protoporphyrin IX
uroporphyrinogen-III
oxygen
hydrogen sulfide
2-chloroacetate
sn-glycerol 3-phosphate
sn-glycerol 1-phosphate
(R)-glycerate
2,3-diphospho-D-glycerate
3-phospho-D-glyceroyl-phosphate
2-phospho-D-glycerate
3-phospho-D-glycerate
dTDP-4-dehydro-6-deoxy-α-D-glucopyranose
(2S)-2-phospholactate
(2R)-2,3-dihydroxy-3-methylbutanoate
N-acetyl-D-mannosamine 6-phosphate
S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine
N-acetyl-β-neuraminate 9-phosphate
(R)-citramalate
(S)-citramalate
(R)-methylmalonate-semialdehyde
(S)-methylmalonate-semialdehyde
5,10-methenyltetrahydrofolate mono-L-glutamate
(S)-3-hydroxy-isobutanoate
(S)-2-hydroxyglutarate
superoxide
monodehydroascorbate radical
chloramphenicol 3-acetate
S-(hydroxymethyl)glutathione
dimethyl sulfide
methionol
3-(methylsulfanyl)propanal
glutathione
thiocyanate
methanethiol
S-sulfanylglutathione
2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate
2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate
5-(2-hydroxyethyl)-4-methylthiazole
4-methyl-5-(2-phosphooxyethyl)thiazole
sulfoacetaldehyde
coenzyme M
L-cysteate
3-sulfopyruvate
trimethyl sulfonium
sulfate
sulfite
selenate
thiosulfate
hydrogensulfite
hydrogencarbonate
molybdate
chloride
phosphate
triphosphate
diphosphate
Fe3+
Co2+
Mg2+
Mo2+
Cd2+
Zn2+
Cu2+
Ni2+
H+
Na+
K+
ammonium
glycine betaine
(2Z)-2-aminobut-2-enoate
agmatine
N1-acetylspermidine
N-acetylputrescine
N1-acetylspermine
spermine
putrescine
dehydrospermidine
spermidine
tyramine
2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
2,5-dichloro-p-quinone
2,5-dichloro-p-quinol
5-chloro-5-deoxy-D-ribonate
5-chloro-4-hydroxy-2-oxopentanoate
5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide
1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
phosphoribulosylformimino-AICAR-phosphate
5-amino-4-imidazolecarboxyamide
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
methane
estrone
glycocholate
cholate
3-β-hydroxyandrost-5-en-17-one
2-methylbutanoyl-CoA
(E)-2-methylcrotonoyl-CoA
(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA
trans-caffeoyl-CoA
trans-feruloyl-CoA
(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA
(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA
(S)-3-hydroxy-3-methylglutaryl-CoA
succinyl-CoA
phenylacetyl-CoA
isobutanoyl-CoA
3'-dephospho-CoA
2-methylacetoacetyl-CoA
acetyl-CoA
crotonyl-CoA
(3R)-3-hydroxybutanoyl-CoA
butanoyl-CoA
propanoyl-CoA
3-oxopentanoyl-CoA
acetoacetyl-CoA
L-galactono-1,4-lactone
cis-dienelactone
trans-dienelactone
tributyrin
1,2-dibutyrin
FADH2
FAD
FMNH2
FMN
(S)-NADHX
(R)-NADHX
NADPH
NADH
NADP+
NAD+
ubiquinol-8
menaquinol-8
menaquinol-7
menaquinol-9
menaquinol-6
menaquinol-10
menaquinol-11
menaquinol-12
menaquinol-13
demethylmenaquinol-8
demethylmenaquinol-7
demethylmenaquinol-9
demethylmenaquinol-6
demethylmenaquinol-10
demethylmenaquinol-11
demethylmenaquinol-12
demethylmenaquinol-13
3-demethylubiquinol-8
molybdopterin
tetrahydrosarcinapterin
5-methyl-tetrahydrosarcinapterin
methyl-CoM
coenzyme A
MoO2-molybdopterin cofactor
oxidized coenzyme F420-0
oxidized coenzyme F420-2
demethylated 7,8-dihydromethanopterin
7,8-dihydromethanopterin
5,10-methylene-tetrahydromethanopterin
5,10-methenyltetrahydromethanopterin
5-formyl-tetrahydromethanopterin
N5-methyltetrahydromethanopterin
tetrahydromethanopterin
5,6,7,8-tetrahydrofolate
tetrahydropteroyl tri-L-glutamate
5,10-methylenetetrahydropteroyl mono-L-glutamate
10-formyl-tetrahydrofolate mono-L-glutamate
5-methyltetrahydropteroyl mono-L-glutamate
5-methyltetrahydropteroyl tri-L-glutamate
(6S)-5-formyl-tetrahydrofolate mono-L-glutamate
7,8-dihydrofolate monoglutamate
L-ascorbate
nicotinate
thiamine
riboflavin
pyridoxal 5'-phosphate
(S)-1-pyrroline-5-carboxylate
precorrin-7
precorrin-6B
precorrin-6A
precorrin-1
precorrin-8x
precorrin-3B
precorrin-4
precorrin-5
precorrin-2
precorrin-3A
sirohydrochlorin
hydantoin
6,7-dimethyl-8-(1-D-ribityl)lumazine
reduced riboflavin
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate
2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin
7,8-dihydroneopterin 2'-phosphate
7,8-dihydroneopterin 3'-phosphate
7,8-dihydroneopterin
6-(hydroxymethyl)-7,8-dihydropterin
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-(4-aminophenyl)-1-deoxy-D-ribitol 5'-phosphate
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-(4-aminophenyl)-1-deoxy-D-ribitol
molybdopterin adenine dinucleotide
(7,8-dihydropterin-6-yl)methyl diphosphate
7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate
cyclic pyranopterin phosphate
7,8-dihydroneopterin 3'-triphosphate
7,8-dihydroneopterin 2',3'-cyclic phosphate
7,8-dihydropteroate
(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin
guanine
adenine
2'-deoxyadenosine
2'-deoxyguanosine
xanthosine
adenosine
hypoxanthine
dAMP
dGMP
dITP
dGTP
dATP
dIDP
dGDP
dADP
IDP
GDP
ADP
IMP
XMP
GMP
AMP
ITP
GTP
ATP
dUDP
dCTP
dUTP
cytosine
uracil
dTTP
5,6-dihydrouracil
5,6-dihydrothymine
orotate
dCMP
dCDP
UDP
CDP
UTP
CTP
dTDP
dUMP
dTMP
UDP-α-D-galacturonate
UDP-α-D-galactose
UDP-N-acetyl-α-D-muramoyl-L-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate
UDP-α-D-glucuronate
UDP-α-D-glucose
dTDP-β-L-rhamnose
dTDP-4-dehydro-β-L-rhamnose
dTDP-α-D-glucose
5-fluorouracil
cytidine
uridine
2'-deoxycytidine
2'-deoxyuridine
thymidine
thymine
UMP
CMP
baicalein
6,7-dehydrobaicalein
salicylaldehyde
4-hydroxyacetophenone
4-tyrosol
4-hydroxybenzoate
3-methoxy-4-hydroxyphenylglycol
benzaldehyde
(4-hydroxyphenyl)acetaldehyde
phenylacetaldehyde
(indol-3-yl)acetaldehyde
indole
(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate
6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol
2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol
phenol
S-1-(4-hydroxyphenyl)-ethanol
6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one
6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one
2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one
3,4-dihydroxyphenylglycol
3,4-dihydroxyphenylglycolaldehyde
salicylate
4-aminobenzoate
benzoate
L-serine
β-alanine
(R)-β-lysine
glycine
L-alanine
L-proline
L-leucine
L-glutamine
D-glutamate
L-glutamate
L-lysine
L-histidine
L-arginine
L-aspartate
L-cysteine
L-tyrosine
L-threonine
L-asparagine
L-phenylalanine
L-tryptophan
D-alanine
L-aspartyl-4-phosphate
seleno-L-homocysteine
L-selenomethionine
N-carbamoylglycine
N-acetyl-L-ornithine
N-acetyl-L-methionine
N-acetyl-L-glutamate
N-carbamoyl-L-aspartate
O-acetyl-L-homoserine
3-phospho-L-serine
L-citrulline
L-valine
L-isoleucine
S-sulfo-L-cysteine
L-glutamate-5-semialdehyde
O-phospho-L-homoserine
L-homoserine
L-aspartate 4-semialdehyde
L-homocysteine
L-ornithine
S-adenosyl-L-methionine
S-adenosyl-L-homocysteine
S-(4-hydroxy-nonenal-3-yl)-L-cysteine
meso-diaminopimelate
L-selenocysteine
L-methionine
L-cystathionine
chorismate
succinate
fumarate
(S)-malate
3-(carbamoylamino)-2-methylpropanoate
cis-homoaconitate
(2R)-homocitrate
cis-aconitate
D-threo-isocitrate
(S)-lactate
(R)-lactate
pyruvate
acetate
formate
propanoate
butanoate
octanoate
apo-4'-lycopenoate
phytenate
D-gluconate
aldehydo-D-glucuronate
aldehydo-D-galacturonate
3-phenyl-2-oxopropanoate
3-(4-hydroxyphenyl)pyruvate
2-oxobutanoate
2-oxoglutarate
methylglyoxal
diacetyl
6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone
3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone
(R)-acetoin
glycolaldehyde
butan-1-al
1-propanal
isobutanal
1-octanal
acetaldehyde
formaldehyde
(S)-lactaldehyde
phytenal
L-glyceraldehyde
D-glyceraldehyde
α-D-glucopyranose
β-D-glucopyranose
β-D-galactopyranose
aldehydo-D-ribose
α-D-ribofuranose
β-D-ribofuranose
butan-1-ol
propan-1-ol
ethanol
methanol
phytol
glycerol
galactitol
(3R)-linalool
(3S)-linalool
myo-inositol
scyllo-inosose
galactinol
D-galactosylononitol
D-ononitol
1D-myo-inositol 3-monophosphate
saturated CDP-archaeol
unsaturated CDP-archaeol
2,3-bis-O-phytanyl-sn-glycerol 1-phosphate
2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate
geranyl diphosphate
all-trans-heptaprenyl diphosphate
geranylgeranyl diphosphate
all-trans-octaprenyl diphosphate
di-trans,octa-cis-undecaprenyl diphosphate
apo-4'-lycopenal
phytyl diphosphate
3-octaprenyl-4-hydroxybenzoate
phlorisovalerophenone
deoxyhumulone
4-prenylphlorisovalerophenone
deoxycohumulone
betanidin
betanidin quinone
ferric-enterobactin complex
maltotriose
maltotetraose
sucrose
N-acetyl-β-D-glucosamine
β-D-fructofuranose
1-O-acetyl-α-maltose
a peptidoglycan dimer (S. aureus)
a peptidoglycan dimer (E. faeciums)
a peptidoglycan with D,D cross-link (S. aureus)
a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)
a peptidoglycan dimer (meso-diaminopimelate containing)
a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine
D-ribulose-1,5-bisphosphate
sucrose 6F-phosphate
GDP-4-dehydro-α-D-rhamnose
GDP-α-D-mannose
ADP ribose 1'',2''-cyclic phosphate
ADP ribose 1''-phosphate
ADP-D-ribose
D-glyceraldehyde 3-phosphate
α-D-glucopyranose 1-phosphate
D-erythrose 4-phosphate
1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate
5-phospho-α-D-ribose 1-diphosphate
β-D-fructose 1,6-bisphosphate
D-fructose 6-phosphate
β-D-fructofuranose 6-phosphate
β-D-mannopyranose 6-phosphate
α-D-mannopyranose 6-phosphate
α-D-glucose 6-phosphate
β-D-glucose 6-phosphate
D-ribulose 5-phosphate
aldehydo-D-ribose 5-phosphate
α-D-ribose-1-phosphate
2-deoxy-α-D-ribose 1-phosphate
L-fuculose 1-phosphate
β-D-glucopyranose 1-phosphate
β-D-fructofuranose 1-phosphate
α-D-mannose 1-phosphate
aldehydo-L-galactonate
L-gulonate
1-(5-phospho-β-D-ribosyl)-AMP
8-oxo-dGTP
8-oxo-dGMP
cyclic-AMP
5'-deoxyadenosine
1-(5-phospho-β-D-ribosyl)-ATP
adenylo-succinate
5-fluorocytosine
β-nicotinamide D-ribonucleotide
2-iminobutanoate
2-iminosuccinate
N-acetyl-L-glutaminyl-L-glutamine
N-acetyl-L-glutaminyl-L-glutamine amide