an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

4-oxoglutaramate

(2E)-2-hydroxypenta-2,4-dienoate

(3E)-2-oxopent-3-enoate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

H₂O

CO₂

selenophosphate

orotidine 5'-phosphate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

4'-phosphopantetheine

ADP-L-glycero-β-D-manno-heptose

ADP-D-glycero-β-D-manno-heptose

aminoacetone

glycerone phosphate

O-acetyl-L-serine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N¹-(5-phospho-β-D-ribosyl)glycinamide

phosphoenolpyruvate

oxaloacetate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

L-canavanine

(R)-pantothenate

3-dehydroshikimate

shikimate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

preuroporphyrinogen

porphobilinogen

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

prenyl diphosphate

α-D-glucosamine 1-phosphate

pseudouridine 5'-phosphate

carbamoyl phosphate

S-formylglutathione

5-oxo-L-proline

5-aminolevulinate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

hydrogen peroxide

D-gluconate 6-phosphate

dihydroxyacetone

3-dehydroquinate

4-hydroxy-2-nonenal

isopentenyl diphosphate

2,5-didehydro-D-gluconate

2-keto-D-gluconate

L-selenocystathionine

autoinducer 2

S-ribosyl-L-homocysteine

3-deoxy-D-arabino-heptulosonate 7-phosphate

prephenate

nicotinate adenine dinucleotide

β-nicotinate D-ribonucleotide

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

formamide

itaconate

6-phospho D-glucono-1,5-lactone

dethiobiotin

7,8-diaminopelargonate

3-mercaptopyruvate

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol aldehyde

indole-3-glycol

isobutanol

3-methylbutanal

3-methylbutanol

2-methylbutanal

2-methylbutanol

2-phenylethanol

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

L-histidinol phosphate

histidinol

histidinal

3-phosphooxypyruvate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

lipid IV_A

lipid A disaccharide (E. coli)

3-deoxy-α-D-manno-2-octulosonate

(S)-dihydroorotate

(S)-4-amino-5-oxopentanoate

3-deoxy-D-manno-octulosonate 8-phosphate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

β-D-ribosylnicotinate

urea

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

(R)-mevalonate

arsenite

urocanate

acrylate

anthranilate

N-(5-phosphoribosyl)-anthranilate

2-amino-2-deoxy-D-gluconate 6-phosphate

N-acetyl-D-muramate 6-phosphate

salicyl alcohol

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

oxalosuccinate

1,6-anhydro-N-acetyl-β-muramate

(R)-1-amino-2-propanol O-2-phosphate

ethanolamine

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

3-demethylubiquinol-6

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

1,4-dihydroxy-2-naphthoyl-CoA

acetyl phosphate

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

5-phospho-β-D-ribosylamine

4-imidazolone-5-propanoate

hydrogen selenide

coproporphyrinogen III

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

3-amino-1-hydroxyacetone 1-phosphate

succinate semialdehyde

4-aminobutanoate

3-oxopropanoate

citrate

S-acetyldihydrolipoamide

dihydrolipoamide

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

quinolinate

(2S)-2-isopropylmalate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

6-deoxyerythronolide B

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

5-(methylsulfanyl)-α-D-ribose

S-methyl-5'-thioadenosine

2-dehydropantoate

carbonic acid

S-adenosyl 3-(methylsulfanyl)propylamine

2-C-methyl-D-erythritol 4-phosphate

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

lipid X

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-methylumbelliferyl glucoside

4-hydroxybenzaldehyde

scopolin

cis-coumarinic acid-β-D-glucoside

xanthine

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

glycolate

2-phosphoglycolate

N-succinyl-L,L-2,6-diaminopimelate

glutathione disulfide

methylsalicylate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate

cyanate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

(enterobacterial common antigen)-undecaprenyl diphosphate

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

(indol-3-yl)pyruvate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

γ-L-glutamyl 5-phosphate

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

8-amino-7-oxononanoate

pimeloyl-CoA

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

benzoylsuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

glutathionylspermidine

trypanothione

(S)-4-hydroxy-2-oxopentanoate

2-oxopent-4-enoate

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

3-(2,3-dihydroxyphenyl)propanoate

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate

4-pyridoxolactone

histamine

4-acetamidobutanoate

4-acetamidobutanal

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

pyrazine-2-carboxylate

4-deoxy-4-formamido-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

UDP-4-deoxy-4-formamido-β-L-arabinopyranose

4-amino-4-deoxychorismate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

α-ribazole

β-D-galactosyl-(1→4)-N-acetyl-D-glucosamine

vanillin

2-isopropylmaleate

5-carboxymethyl-2-hydroxymuconate

(4S)-4-hydroxy-2-oxoheptanedioate

D-glycero-β-D-manno-heptose 1-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

(4-hydroxyphenyl)acetate

core oligosaccharide-lipid A (E. coli K-12 core type)

2-hydroxy-5-carboxymethylmuconate semialdehyde

dialurate

carbon monoxide

4-amino-2-methyl-5-pyrimidinemethanol

4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

H₂

3-hydroxypropanoate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

3-hydroxy-2-methylpyridine-5-carboxylate

(2Z)-2-(acetamidomethylene)succinate

acetoacetate

2-iminoacetate

glutathioselenol

selenodiglutathione

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

1,4-dihydroxy-2-naphthoate

2-amino-3-carboxymuconate-6-semialdehyde

(R)-5-phosphomevalonate

(R)-mevalonate diphosphate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

pseudouridine

L-gulono-1,4-lactone

L-xylo-hex-3-ulono-1,4-lactone

α-D-galacturonate 1-phosphate

ammonia

L-dehydro-ascorbate

(2E,6E)-farnesyl diphosphate

pristanate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

2-iminopropanoate

2-iminosuccinate

2-iminobutanoate

L-α-amino-ε-keto-pimelate

carbamate

L-homoarginine

glycine

L-isoleucine

L-leucine

L-valine

L-alanine

L-proline

L-phenylalanine

L-tryptophan

L-selenocysteine

L-methionine

L-cysteine

L-isoglutamine

L-threonine

L-serine

L-glutamate

L-glutamine

L-asparagine

L-aspartate

L-ornithine

L-arginine

L,L-diaminopimelate

L-aspartyl-4-phosphate

L-lysine

L-cystathionine

L-histidine

L-tyrosine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

L-citrulline

L-4-hydroxyglutamate semialdehyde

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-homocysteine

L-aspartate 4-semialdehyde

S-sulfo-L-cysteine

O-phospho-L-homoserine

L-homoserine

O-succinyl-L-homoserine

L-canaline

L-glutamate-5-semialdehyde

3-sulfino-L-alanine

L-cystine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-2-amino-3-oxobutanoate

L-selenomethionine

seleno-L-homocysteine

S-sulfanyl-L-cysteine

O-acetyl-L-homoserine

N-acetyl-L-glutamate

N-acetyl-L-methionine

L-threonine 3-O-phosphate

3-phospho-L-serine

D-glutamate

D-alanine

D-serine

β-alanine

(S)-3-amino-2-methylpropanoate

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

GDP

GTP

AMP

ATP

ADP

cyclic-AMP

adenylo-succinate

IMP

guanosine 3'-monophosphate

adenosine 3'-monophosphate

dADP

dGDP

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

dATP

dGTP

XMP

GMP

2'-deoxyinosine

2'-deoxyadenosine

ITP

IDP

dITP

dIDP

dAMP

ppGpp

pppGpp

2'-deoxyguanosine

hypoxanthine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

dGMP

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

GDP-α-D-mannose

GDP-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

dTDP-4-acetamido-4,6-dideoxy-α-D-galactose

dTDP-β-L-mycarose

dTDP-D-desosamine

UDP-α-D-glucuronate

UDP-α-D-glucose

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-galactose

UDP-β-L-threo-pentapyranos-4-ulose

UDP-4-amino-4-deoxy-β-L-arabinopyranose

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

adenine

guanine

uracil

thymine

preQ₁

uridine 3'-monophosphate

cytidine-3'-monophosphate

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

dUMP

dCMP

dTMP

dCDP

dUDP

dTDP

dUTP

dTTP

dCTP

CDP

UDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

CTP

UTP

CMP

UMP

NAD⁺

NADP⁺

NADH

NADPH

2'-deoxyuridine

2'-deoxycytidine

thymidine

adenosine

xanthosine

inosine

guanosine

uridine

cytidine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5'-deoxy-5'-fluoroadenosine

D-gluconate

D-mannonate

D-altronate

L-gulonate

aldehydo-L-galactonate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

lotaustralin

arbutin-6-phosphate

salicin 6-phosphate

methyl β-D-glucoside 6-phosphate

taxiphyllin

linamarin

linustatin

neolinustatin

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

D-sedoheptulose 7-phosphate

L-fuculose 1-phosphate

α-D-galactose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

D-fructose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-tagatofuranose 1,6-bisphosphate

D-tagatofuranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^G-phosphate

N,N'-diacetylchitobiose 6'-phosphate

N-monoacetylchitobiose 6'-phosphate

sucrose 6^F-phosphate

β-D-cellobiose 6'-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

α-L-fucopyranose

β-L-fucopyranose

β-D-fructofuranose

glycolaldehyde

aldehydo-D-ribose

β-D-ribopyranose

β-D-ribofuranose

α-D-ribofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

L-fuculose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

glycerol

β-D-cellobiose

maltotriose

α-Kdo-(2→6)-lipid IV_A

heptosyl-Kdo₂-lipid A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

heptosyl-Kdo₂-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

galactosyl-glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

(heptosyl)₂-Kdo₂-lipid A

glucosyl-(heptosyl)₂-Kdo₂-lipid A

glucosyl-(heptosyl)₂-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

galactosyl-(glucosyl)₂-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₃-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

4'-α-L-Ara4N-α-Kdo-(2→4)-α-Kdo-(2→6)-[P4'-α-L-ara4N]-lipid A

sucrose

maltotetraose

maltopentaose

maltohexaose

maltoheptaose

aldehydo-D-galacturonate

salicylaldehyde

4-methylumbelliferone

coumarin

scopoletin

all-trans-retinol

all-trans-retinyl palmitate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

apo-4'-lycopenal

apo-4'-lycopenoate

erythromycin D

3-α-mycarosylerythronolide B

vibriobactin

enterobactin

erythronolide B

vanillylamine

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

1,2-dibutyrin

tributyrin

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

1-18:1-2-18:1-phosphatidylethanolamine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1,2-dipalmitoyl-sn-glycero-3-phosphocholine

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-palmitoyl-sn-glycero-3-phosphocholine

1-oleoyl-2-lyso-glycerone phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

scyllo-inositol

1D-chiro-inositol

myo-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1-keto-D-chiro-inositol

scyllo-inosose

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

hydroquinone

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

2,3-dihydroxybenzoate

3,4-dihydroxyphenylacetate

protocatechuate

ethanol

propan-1-ol

phytol

butan-1-ol

methanol

fluoroacetaldehyde

methylglyoxal

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

phytenal

(S)-lactaldehyde

acetaldehyde

1-propanal

isobutanal

formaldehyde

1-octanal

butan-1-al

menadione

diacetyl

a coenzyme-A group

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

pyruvate

2-oxobutanoate

2-oxoglutarate

glyoxylate

4-(methylsulfanyl)-2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

trans-cinnamate

4-aminobenzoate

benzoate

acetate

5-deoxy-D-glucuronate

orotate

(R)-pantoate

fluoroacetate

D-tagaturonate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

octanoate

decanoate

palmitate

butanoate

stearate

oleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

linoleate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

(15Z)-tetracosenoate

phytenate

3-oxoadipate

formate

propanoate

(R)-lactate

(S)-lactate

(2R,3S)-2-methylisocitrate

(R)-glycerate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

chorismate

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

fumarate

succinate

(S)-malate

4-hydroxybenzoate

4-tyrosol

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

urate

coumarinate

2,3-dihydroxy-trans-cinnamate

3-hydroxy-trans-cinnamate

4-methylphenol

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

3-demethylubiquinol-9

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

demethylmenaquinol-8

menaquinol-8

ubiquinol-9

ubiquinol-8

ubiquinol-6

ubiquinol-7

ubiquinol-10

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

hydrogen cyanide

acrylonitrile

preQ₀

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-phosphate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

FMN

riboflavin

FAD

reduced riboflavin

FMNH₂

FADH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

adenosylcobalamin

cob(I)alamin

sirohydrochlorin

cobyrinate

precorrin-3A

precorrin-2

cobalt-precorrin-2

precorrin-4

precorrin-3B

precorrin-1

cobalt-precorrin-6A

cobalt-precorrin-6B

precorrin-5

precorrin-8x

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-5B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

L-ascorbate

nicotinate

nicotinamide

thiamine

pyridoxine 5'-phosphate

pyridoxine

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxal 5'-phosphate

pyridoxal

4-pyridoxate

coenzyme A

(R)-NADHX

(S)-NADHX

glycine betaine

D-glucono-1,5-lactone

L-galactono-1,4-lactone

3'-dephospho-CoA

acetyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

2-methylacetoacetyl-CoA

malonyl-CoA

succinyl-CoA

itaconyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

dihomo γ-linolenoyl-CoA

isobutanoyl-CoA

3-hydroxypropanoyl-CoA

acryloyl-CoA

methylacrylyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

hexadecanedioyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

octanoyl-CoA

lauroyl-CoA

decanoyl-CoA

hexanoyl-CoA

butanoyl-CoA

propanoyl-CoA

cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

2-carboxy-cerotoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dec-2-enoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

phenylacetate

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

(+)-7-epi-jasmonate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

pyrazinamide

sn-glycero-3-phosphocholine

sn-glycero-3-phosphoethanolamine

choline

betaine aldehyde

betaine aldehyde hydrate

agmatine

putrescine

spermine

spermidine

N-acetylputrescine

N¹-acetylspermine

N¹-acetylspermidine

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

hydrogensulfite

hydrogencarbonate

trithionate

molybdate

superoxide

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

Zn²⁺

Cu²⁺

Co²⁺

Mg²⁺

Fe²⁺

ammonium

K⁺

H⁺

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

methanethiol

S-sulfanylglutathione

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

monodehydroascorbate radical

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

dTDP-4-amino-4,6-dideoxy-α-D-galactose

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

oxygen

hydrogen sulfide

protoporphyrin IX

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

hemin

siroheme

protoheme

cobalt-sirohydrochlorin

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

cobalt-factor III

cob(I)yrinate a,c-diamide

adenosyl-cobinamide phosphate

carboxyphosphinopyruvate

1-carboxyvinyl carboxyphosphonate

3-(hydroxyphosphinoyl)pyruvate

ethylphosphate

(glutathion-S-yl)-4-hydroxy-2-nonenal