an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

6-phospho D-glucono-1,5-lactone

H₂O

3-deoxy-D-arabino-heptulosonate 7-phosphate

phosphoenolpyruvate

CO₂

oxaloacetate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N-acetylglutamyl-phosphate

4'-phosphopantetheine

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

ethanolamine

hydrogen peroxide

S-acetyldihydrolipoamide

dihydrolipoamide

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

2-amino-2-deoxy-D-gluconate 6-phosphate

glycerone phosphate

N-acetyl-D-muramate 6-phosphate

3-deoxy-α-D-manno-2-octulosonate

3-deoxy-D-manno-octulosonate 8-phosphate

α-D-glucosamine 1-phosphate

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

S-formylglutathione

O-acetyl-L-serine

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

N-(5-phosphoribosyl)-anthranilate

5-phospho-β-D-ribosylamine

adenosine 3',5'-bisphosphate

glycolate

2-phosphoglycolate

coproporphyrinogen III

homogentisate

(2-hydroxyphenyl)acetate

enol-phenylpyruvate

4-maleyl-acetoacetate

4-amino-4-deoxychorismate

xanthine

citrate

acetoacetate

oxalosuccinate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

orotidine 5'-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

3-dehydroshikimate

shikimate

3-dehydroquinate

L-quinate

D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

cis,cis-muconate

4-methylmuconolactone

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

muconolactone

(+)-muconolactone

prephenate

hydrogen selenide

glutathione disulfide

α-ribazole

α-ribazole 5'-phosphate

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N¹-(5-phospho-β-D-ribosyl)glycinamide

carbon monoxide

N-acetyl-L-glutamate 5-semialdehyde

succinate semialdehyde

4-aminobutanoate

3-oxopropanoate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

5-dehydro-4-deoxy-D-glucarate

thiamine diphosphate

thiamine phosphate

5-amino-6-(D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribitylamino)uracil

quinolinate

β-nicotinate D-ribonucleotide

anthranilate

preuroporphyrinogen

7,8-diaminopelargonate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

8-amino-7-oxononanoate

(R)-2,3-dihydroxy-3-methylpentanoate

1-deoxy-L-glycero-tetrulose 4-phosphate

hydrogenobyrinate a,c-diamide

2-keto-D-gluconate

carbonic acid

3-phosphooxypyruvate

5-carboxymethyl-2-hydroxymuconate

porphobilinogen

2-(α-hydroxyethyl)thiamine diphosphate

2-aminomalonate semialdehyde

urea-1-carboxylate

phthalate 4,5-cis-dihydrodiol

phthalate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

L-arogenate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-phosphooxy-L-threonine

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol aldehyde

indole-3-glycol

isobutanol

3-methylbutanal

3-methylbutanol

2-methylbutanal

2-methylbutanol

2-phenylethanol

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

dethiobiotin

pimeloyl-CoA

salicyl alcohol

methylsalicylate

methylamine

ethylamine

N-ethylglycine

2-iminoacetate

isopentenyl diphosphate

urea

(S)-ureidoglycolate

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

histidinol

histidinal

L-histidinol phosphate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

3'-phosphoadenylyl-sulfate

γ-L-glutamyl 5-phosphate

nicotinate adenine dinucleotide

carbamoyl phosphate

2-dehydropantoate

urocanate

4-imidazolone-5-propanoate

formamide

2-dehydro-3-deoxy-L-rhamnonate

L-rhamnonate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

(S)-2,3,4,5-tetrahydrodipicolinate

2-C-methyl-D-erythritol 4-phosphate

lipid A disaccharide (E. coli)

lipid X

hydroxypyruvate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

acetyl phosphate

3-hydroxypropanoate

tartronate semialdehyde

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

6-aminohexanoate

6-aminohexanoate linear dimer

2-O-(β-D-glucopyranosyl)-glycerol

2-(β-D-glucosyl)-sn-glycerol 3-phosphate

lipid IV_A

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-fumaryl-acetoacetate

2,5-didehydro-D-gluconate

2-oleoylglycerol

oxalate

4-hydroxy-2-nonenal

3-mercaptopyruvate

2-aminoacetaldehyde

prephytoene diphosphate

prenyl diphosphate

all-trans-13,14-dihydroretinol

N,N-dimethylaniline-N-oxide

N,N-dimethylaniline

nicotine-1'-N-oxide

coniferaldehyde

2-cis,4-trans-xanthoxin

3-methylmuconolactone

shikimate 3-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

S-Inosyl-L-homocysteine

3-demethylubiquinol-6

5,6-dimethylbenzimidazole

(S)-dihydroorotate

L-gulono-1,4-lactone

α-D-galactosyl-diphosphoundecaprenol

(R)-mandelate

(S)-mandelate

5-methylcytosine

4-(γ-L-glutamylamino)butanoate

γ-glutamyl-L-putrescine

4-(2-aminophenyl)-2,4-dioxobutanoate

4-(2-amino-3-hydroxyphenyl)-2,4-dioxobutanoate

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

(S)-2-amino-6-oxohexanoate

1-piperideine 6-carboxylate

(S)-4-hydroxy-2-oxopentanoate

2,5-dioxopentanoate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

L-canavanine

2-dehydro-3-deoxy-D-galactonate 6-phosphate

N-carbamoylputrescine

myosin light-chain phosphate

a [myosin light-chain] L-serine

β-D-ribosylnicotinate

hydrogenobyrinate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

benzoylsuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

ADP-L-glycero-β-D-manno-heptose

2,3-didehydroadipyl-CoA

(E)-4-coumaroyl-CoA

(E)-2-benzylidenesuccinyl-CoA

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

nigerose

propanoyl phosphate

2-maleylacetate

2-dehydro-3-deoxy-D-galactonate

iminodiacetate

nitrilotriacetate

(L-threonylcarbamoyl)adenylate

4-acetamidobutanoate

4-acetamidobutanal

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

(R)-1-amino-2-propanol O-2-phosphate

selenophosphate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

malonate

2-keto-L-gulonate

DNA without lesion

(R)-pantothenate

norspermidine

carboxynorspermidine

N-(2,3-dihydroxybenzoyl)-L-serine trimer

1,6-anhydro-N-acetyl-β-muramate

dialurate

2-oxopent-4-enoate

H₂

4-amino-2-methyl-5-pyrimidinemethanol

2-dehydro-3-deoxy-D-gluconate

2-amino-3-carboxymuconate-6-semialdehyde

butanoyl phosphate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

core oligosaccharide-lipid A (E. coli K-12 core type)

1,4-dihydroxy-2-naphthoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

3'-ketosucrose

4-(γ-L-glutamylamino)butanal

autoinducer 2

S-ribosyl-L-homocysteine

N⁵-carboxyaminoimidazole ribonucleotide

L-xylo-hex-3-ulono-1,4-lactone

2-dehydro-6-phospho-D-gluconate

adipate

6-oxohexanoate

6-aminohexanoate cyclic dimer

isochorismate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

1,4-dihydroxy-2-naphthoyl-CoA

glutathioselenol

selenodiglutathione

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

vanillin

5-oxo-L-proline

ammonia

α-D-galacturonate 1-phosphate

4-oxoglutaramate

5-hydroxyindole thiazolidine carboxylate

xanthurenate

kynurenate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

L-dehydro-ascorbate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

(2E,6E)-farnesyl diphosphate

pristanate

cyanophycin primer-L-aspartate

cyanophycin primer

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

2-iminobutanoate

2-iminopropanoate

2-iminosuccinate

L-homocysteine

4-methylphenol

hypoglycin B

L-kynurenine

L-2-aminoadipate

L-α-amino-ε-keto-pimelate

glycine

L-alanine

L-leucine

L-phenylalanine

L-selenocysteine

L-isoleucine

L-valine

L-tryptophan

L-proline

L-methionine

L-cysteine

L-aspartate

L-threonine

L-serine

L-glutamate

L-glutamine

L-arginine

L-ornithine

L-aspartyl-4-phosphate

L-tyrosine

L-asparagine

L-lysine

L-histidine

L,L-diaminopimelate

L-2,4-diaminobutanoate

N^ω-hydroxy-L-arginine

L-isoglutamine

N-carbamoyl-L-aspartate

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

L-citrulline

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

hypoglycin A

O-phospho-L-homoserine

L-homoserine

L-aspartate 4-semialdehyde

S-sulfo-L-cysteine

L-glutamate-5-semialdehyde

O-succinyl-L-homoserine

1-aminocyclopropane-1-carboxylate

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-selenomethionine

seleno-L-homocysteine

L-saccharopine

L-threonine 3-O-phosphate

3-phospho-L-serine

O-acetyl-L-homoserine

cis-4-hydroxy-D-proline

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

D-alanine

D-cysteine

D-glutamate

D-aspartate

β-alanine

(S)-3-amino-2-methylpropanoate

ADP

ATP

AMP

2'-deoxyguanosine

dGTP

adenylo-succinate

XMP

IMP

GDP

GTP

dADP

dATP

dGDP

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-AMP

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-ATP

2'-deoxyinosine

2'-deoxyadenosine

hypoxanthine

guanosine 3'-monophosphate

adenosine 3'-monophosphate

ITP

IDP

dITP

dIDP

ppGpp

pppGpp

GMP

cyclic-GMP

dGMP

dAMP

isoguanine

8-oxo-dGTP

8-oxo-GTP

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-α-D-mannuronate

GDP-α-D-glucose

GDP-β-L-fucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-galactose

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

guanine

adenine

uracil

cytosine

thymine

preQ₁

NADP⁺

NAD⁺

NADPH

NADH

cyclic di-3',5'-guanylate

dTMP

dUMP

dCMP

dCDP

dTDP

dUDP

dTTP

dUTP

dCTP

UDP

CDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

CTP

UTP

CMP

UMP

2-hydroxy-dATP

5-hydroxy-CTP

cytidine-3'-monophosphate

uridine 3'-monophosphate

inosine

adenosine

guanosine

xanthosine

cytidine

uridine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5-fluorouracil

5-fluorocytosine

D-gluconate

L-gulonate

D-galactonate

L-gluconate

D-idonate

aldehydo-L-galactonate

1-(β-D ribofuranosyl)nicotinamide

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3-dehydro-D-glucopyranose

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

D-sedoheptulose 7-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

α-maltose 1-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

4-deoxy-L-threo-hex-4-enopyranuronate

β-D-fructofuranose

keto-D-fructose

keto-L-sorbose

glycolaldehyde

aldehydo-L-arabinose

aldehydo-D-ribose

β-D-ribopyranose

α-D-ribofuranose

β-D-ribofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-mannopyranose

β-D-glucopyranose

α-D-glucopyranose

L-sorbosone

aldehydo-D-mannose

D-glyceraldehyde

L-glyceraldehyde

D-xylulose

L-sorbosone 2,6-lactone

L-sorbosone 1,4-lactone

L-glucose

3,6-anhydro-α-L-galactopyranose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-β-D-glucosamine

glycerol

D-mannitol

galactitol

D-sorbitol

L-arabinitol

agarotriose

agaropentaose

neoagarobiose

neoagarotetraose

neoagarohexaose

maltotriose

(heptosyl)₂-Kdo₂-lipid A

heptosyl-Kdo₂-lipid A

heptosyl-Kdo₂-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

α-Kdo-(2→6)-lipid IV_A

glucosyl-(heptosyl)₂-Kdo₂-lipid A

glucosyl-(heptosyl)₂-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₂-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₃-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

sucrose

α-maltose

α,α-trehalose

maltotetraose

maltopentaose

maltohexaose

maltoheptaose

aldehydo-D-galacturonate

salicylaldehyde

all-trans-retinol

all-trans-retinyl palmitate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

geranyl diphosphate

apo-4'-lycopenal

(3S,5R,6S)-5,6-epoxy-3-hydroxy-5,6-dihydro-12'-apo-β-caroten-12'-al

15-cis-phytoene

γ-carotene

all-trans-lycopene

all-trans phytofluene

β-carotene

(3S,5R,6R)-3,5-dihydroxy-6,7-didehydro-5,6-dihydro-12'-apo-β-caroten-12'-al

9-cis-violaxanthin

apo-4'-lycopenoate

9'-cis-neoxanthin

ferric-enterobactin complex

iron(III) dicitrate

ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex

betanidin quinone

betanidin

(S)-nicotine

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

geranylgeranyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1-oleoyl-2-lyso-glycerone phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1,2-dibutyrin

1-oleoyl-sn-glycerol

tributyrin

myo-inositol

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

3,5-cyclohexadiene-1,2-diol-1-carboxylate

protocatechuate

catechol

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

4,6-dichloro-3-methylcatechol

ethanol

propan-1-ol

phytol

butan-1-ol

methanol

3-(N-morpholino)propanal

methylglyoxal

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

phytenal

(S)-lactaldehyde

(R)-lactaldehyde

formaldehyde

acetaldehyde

butan-1-al

1-propanal

isobutanal

1-octanal

menadione

caldariellaquinone

diacetyl

a coenzyme-A group

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

pyruvate

2-oxobutanoate

glyoxylate

2-oxoglutarate

4-(methylsulfanyl)-2-oxobutanoate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

vanillate

salicylate

4-aminobenzoate

benzoate

acetate

orotate

(R)-pantoate

5-dehydro-L-gluconate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

leukotriene-D4

leukotriene-E4

butanoate

octanoate

decanoate

palmitate

stearate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

oleate

linoleate

dinor-12-oxo-phytodienoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

(3E,5Z)-tetradecadienoate

γ-linolenate

di-homo-γ-linolenate

(15Z)-tetracosenoate

phytenate

3-oxoadipate

formate

propanoate

(R)-lactate

(S)-lactate

(2R,3S)-2-methylisocitrate

(R)-glycerate

(R)-3-hydroxybutanoate

3-carboxy-cis,cis-muconate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

cis-aconitate

D-threo-isocitrate

chorismate

3-methyl-cis,cis-muconate

D-glucarate

D-galactarate

fumarate

succinate

(S)-malate

4-hydroxybenzoate

4-tyrosol

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

urate

ferulate

6,7-dehydrobaicalein

baicalein

3-chlorobenzoate

3-chlorobenzaldehyde

(1R,2S)-4,6-dichloro-3-methylcyclohexa-3,5-diene-1,2-diol

2,4-dichlorotoluene

2-iodobenzoate

2-bromobenzoate

4-nitrophenol

menadiol

caldariellaquinol

3-demethylubiquinol-9

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

demethylmenaquinol-7

demethylmenaquinol-6

demethylmenaquinol-8

menaquinol-7

menaquinol-6

menaquinol-8

ubiquinol-9

ubiquinol-8

ubiquinol-6

ubiquinol-7

ubiquinol-10

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

hydrogen cyanide

preQ₀

(indole-3-yl)acetonitrile

acrylonitrile

7,8-dihydrolumazine

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

molybdopterin

cyclic pyranopterin phosphate

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-phosphate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

FMN

riboflavin

FAD

FADH₂

FMNH₂

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

cob(I)alamin

adenosylcobalamin

sirohydrochlorin

cobyrinate

precorrin-5

precorrin-4

precorrin-2

precorrin-1

precorrin-6A

precorrin-6B

precorrin-8x

precorrin-7

precorrin-3A

precorrin-3B

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

L-ascorbate

thiamine

nicotinate

nicotinamide

pyridoxine 5'-phosphate

pyridoxine

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxal 5'-phosphate

pyridoxal

coenzyme A

(R)-NADHX

(S)-NADHX

glycine betaine

D-glucono-1,5-lactone

L-glucono-1,5-lactone

3,5-dichloro-2-methyl-muconolactone

2-chloro-5-methyl-dienelactone

cis-dienelactone

trans-dienelactone

L-galactono-1,4-lactone

3-chloro-2-methyl-dienelactone

acetyl-CoA

malonyl-CoA

succinyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

4-hydroxybenzoyl-CoA

3'-dephospho-CoA

2-methylacetoacetyl-CoA

3-hydroxypropanoyl-CoA

oxalyl-CoA

formyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

(2S)-methylsuccinyl-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

choloyl-CoA

chenodeoxycholoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

(2E,5Z)-tetradecenoyl-CoA

methylacrylyl-CoA

isobutanoyl-CoA

isovaleryl-CoA

dihomo γ-linolenoyl-CoA

(E)-glutaconyl-CoA

acryloyl-CoA

phenylacetyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

hexadecanedioyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

octanoyl-CoA

decanoyl-CoA

lauroyl-CoA

hexanoyl-CoA

propanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dec-2-enoyl-CoA

trans-hex-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

estrone

17β-estradiol

ethene

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

phenylacetate

(+)-7-epi-jasmonate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3β-hydroxy-4β-methyl-5α-cholest-7-ene-4α-carboxylate

4α-carboxy-4β-methyl-5α-cholesta-8-en-3β-ol

4α-carboxy-5α-cholesta-8-en-3β-ol

4α-carboxy-4β-methyl-5α-cholesta-8,24-dien-3β-ol

4α-carboxy-5α-cholesta-8,24-dien-3β-ol

cholate

chenodeoxycholate

4α-methyl-5α-cholest-7-en-3-one

4α-methyl-5α-cholesta-8-en-3-one

5α-cholesta-8-en-3-one

3-dehydro-4-methylzymosterol

zymosterone

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-4-imidazolecarboxyamide

6-caprolactam

acetamide

3,5-dichloro-2-methyl-muconate

3-chloro-cis,cis-muconate

3-chloro-2-methyl-maleylacetate

2-chloro-5-methyl-maleylacetate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

sn-glycero-3-phosphocholine

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

betaine aldehyde hydrate

choline sulfate

choline

betaine aldehyde

agmatine

spermidine

putrescine

cadaverine

spermine

N-acetylputrescine

N¹-acetylspermine

N¹-acetylspermidine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

superoxide

phosphonate

phosphate

diphosphate

triphosphate

chloride

fluoride

bromide

iodide

Fe³⁺

Cd²⁺

Ni²⁺

Mg²⁺

Co²⁺

Fe²⁺

Cu²⁺

ammonium

H⁺

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

taurine

1-butanesulfonate

isethionate

3-(N-morpholino)propanesulfonate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

methanethiol

S-sulfanylglutathione

4-nitrophenyl phosphate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

nitric oxide

hydroxyl radical

monodehydroascorbate radical

2-chlorobenzoate

2-fluorobenzoate

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

oxygen

hydrogen sulfide

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

Mg-protoporphyrin

protoporphyrin IX

magnesium-protoporphyrin IX 13-monomethyl ester

(Z,Z)-biliverdin-IX α

siroheme

protoheme

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosylcobalamin 5'-phosphate

cob(II)yrinate a,c-diamide

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

cob(II)yrinate c-monoamide

adenosylcobyrate

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

cobalt-sirohydrochlorin

cobalt-factor III

carboxyphosphinopyruvate

1-carboxyvinyl carboxyphosphonate

3-(hydroxyphosphinoyl)pyruvate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal