an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

L-dehydro-ascorbate

α-D-galacturonate 1-phosphate

1,5-anhydro-D-fructose

3'-ketosucrose

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

protoanemonin

2-amino-3-carboxymuconate-6-semialdehyde

selenodiglutathione

glutathioselenol

4-guanidinobutyraldehyde

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

mercuriphenyl acetate

1,4-dihydroxy-2-naphthoate

autoinducer 2

2-dehydro-6-phospho-D-gluconate

L-xylo-hex-3-ulono-1,4-lactone

(S)-5-amino-3-oxohexanoate

(3S,5S)-3,5-diaminohexanoate

ammonia

2-keto-L-gulonate

5-dehydro-2-deoxy-D-gluconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

6-(2-amino-2-carboxylatoethyl)-7-hydroxy-8-oxo-1,2,3,4,7,8-hexahydroquinoline-2,4-dicarboxylate

2-amino-4-[5-(2-amino-2-carboxylatoethyl)-2-hydroxyphenyl]pentanedioate

2-amino-4-[3-(2-amino-2-carboxylatoethyl)-6-oxocyclohexa-1,4-dien-1-yl]pentanedioate

6-(2-amino-2-carboxylatoethyl)-1,2,3,4-tetrahydroquinoline-2,4-dicarboxylate

(R)-synephrine

octopamine

3-hydroxypropanoate

propan-2-ol

(4-hydroxyphenyl)acetate

dethiobiotin

dialurate

7-epicholate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

carboxynorspermidine

norspermidine

nitrilotriacetate

iminodiacetate

31-O-desmethylFK-506

FK-506

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

8-amino-7-oxononanoate

7,8-diaminopelargonate

(S)-mandelate

(R)-mandelate

(L-threonylcarbamoyl)adenylate

β-D-fructose 2,6-bisphosphate

α-D-glucopyranosyl-diphosphoundecaprenol

streptomycin 6-phosphate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

DNA without lesion

S-methyl-5'-thioadenosine

benzoylsuccinyl-CoA

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

5-α-androstan-3β,17β-diol

5-androstene-3,17-dione

pregn-5-ene-3,20-dione-17-ol

pregn-5-ene-3,20-dione

(5S)-5-benzyl-hydantoin

(5R)-5-benzyl-hydantoin

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4S)-4-hydroxy-2-oxoheptanedioate

(S)-2-amino-6-oxohexanoate

5-oxo-L-proline

5-(methylsulfanyl)-ribulose 1-phosphate

5-(methylsulfanyl)-α-D-ribose

S-methyl-5-thio-α-D-ribose 1-phosphate

4-methyl-3-oxoadipate-enol-lactone

4-methyl-3-oxoadipate

salicyl alcohol

2-iminoacetate

N-ethylglycine

ethylamine

3-keto-β-D-galactose

4-amino-2-methyl-5-pyrimidinemethanol

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

α-D-ribose 1,5-bisphosphate

formamide

4-imidazolone-5-propanoate

dimethylamine

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

(S)-ureidoglycolate

tryptamine

5-methoxytryptamine

5-methoxyindoleacetaldehyde

methylamine

(2S)-2-{[1-(R)-carboxyethyl]amino}pentanoate

cis-stilbene oxide

(1R,2R)-1,2-diphenylethane-1,2-diol

6-(2-amino-2-carboxyethyl)-7,8-dioxo-1,2,3,4,7,8-hexahydroquinoline 2,4-dicarboxylate

N6'-acetylkanamycin-B

propane-1,3-diamine

7,8-didemethyl-8-hydroxy-5-deazariboflavin

(2S)-lactyl-2-diphospho-5'-guanosine

(E)-glutaconate

3''-adenylylstreptomycin

meso-tartrate

L-tartrate

2-hydroxy-3-oxosuccinate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

(+)-muconolactone

muconolactone

cis,cis-muconate

2,5-dioxopentanoate

2-keto-D-gluconate

2,5-didehydro-D-gluconate

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

isoquinoline

isoquinolin-2(1H)-one

H₂

acetyl phosphate

tartronate semialdehyde

3-deoxy-D-glycero-2,5-hexodiulosonate

L-gulono-1,4-lactone

5-dehydro-4-deoxy-D-glucarate

selenophosphate

(S)-4-amino-5-oxopentanoate

5-dehydro-D-gluconate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

succinate semialdehyde

D-erythro-imidazole-glycerol-phosphate

nicotine-1'-N-oxide

N,N-dimethylaniline

N,N-dimethylaniline-N-oxide

3-deoxy-α-D-manno-2-octulosonate

L-β-lysine

S-ribosyl-L-homocysteine

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

N-acetyl-D-muramate 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

2-amino-2-deoxy-D-gluconate 6-phosphate

(S)-2,3,4,5-tetrahydrodipicolinate

orotidine 5'-phosphate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

isochorismate

5-guanidino-2-oxopentanoate

histidinal

histidinol

6-phospho D-glucono-1,5-lactone

acetoacetate

2-maleylacetate

lipid IV_A

2-dehydro-3-deoxy-D-galactonate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

3'-phosphoadenylyl-sulfate

phosphonoacetate

(E)-3-(methoxycarbonyl)pent-2-enedioate

adenosine 3',5'-bisphosphate

arsenite

quinolinate

5-phospho-β-D-ribosylamine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

(S)-dihydroorotate

3-dehydroshikimate

S-formylglutathione

3-deoxy-D-manno-octulosonate 8-phosphate

2-(α-hydroxyethyl)thiamine diphosphate

dihydrolipoamide

S-acetyldihydrolipoamide

L-selenocystathionine

5-methylsalicylate

4-methylsalicylate

lipid X

lipid A disaccharide (E. coli)

1,6-anhydro-N-acetyl-β-muramate

prephytoene diphosphate

4'-phosphopantetheine

hydrogen selenide

O-acetyl-L-serine

3-mercaptopyruvate

xanthine

N-(5-phosphoribosyl)-anthranilate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

oxalosuccinate

glutathione disulfide

2-phosphoglycolate

glycolate

5,6-dimethylbenzimidazole

α-ribazole

α-ribazole 5'-phosphate

D-gluconate 6-phosphate

(R)-1-amino-2-propanol O-2-phosphate

(R)-1-aminopropan-2-ol

hydrogenobyrinate

3-amino-1-hydroxyacetone 1-phosphate

(indol-3-yl)acetamide

butyramide

propionamide

acrylamide

2-dehydropantoate

(R)-pantothenate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

D-erythritol 4-phosphate

4-aminobutanoate

aminoacetone

carbamoyl phosphate

anthranilate

2-dehydro-3-deoxy-D-gluconate

3-ureidopropanoate

dihydroxyacetone

5-methylcytosine

3-demethylubiquinol-6

L-arogenate

hydrogenobyrinate a,c-diamide

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

shikimate

shikimate 3-phosphate

urocanate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

3-phosphooxypyruvate

α-D-glucosamine 1-phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N⁵-carboxyaminoimidazole ribonucleotide

phosphoenolpyruvate

4-amino-4-deoxychorismate

sym-homospermidine

β-D-ribosylnicotinate

(R)-2,3-dihydroxy-3-methylpentanoate

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

enol-phenylpyruvate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

2-phenylethanol

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

2-methylbutanol

2-methylbutanal

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

3-methylbutanol

3-methylbutanal

isobutanol

indole-3-glycol

indole-3-glycol aldehyde

1-pyrroline

4-oxoglutaramate

1-piperideine 6-carboxylate

5-hydroxytryptophol

hydrogen peroxide

creatinine

2-dehydro-3-deoxy-D-gluconate 6-phosphate

cis-coumarinic acid-β-D-glucoside

scopolin

4-hydroxybenzaldehyde

4-methylumbelliferyl glucoside

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

4-fumaryl-acetoacetate

4-maleyl-acetoacetate

(2-hydroxyphenyl)acetate

homogentisate

ethanolamine

2-C-methyl-D-erythritol 4-phosphate

5-aminolevulinate

carbon monoxide

L-canavanine

urea

glycerone phosphate

porphobilinogen

preuroporphyrinogen

γ-L-glutamyl 5-phosphate

β-nicotinate D-ribonucleotide

nicotinate adenine dinucleotide

(2S)-2-isopropylmalate

2-isopropylmaleate

citraconate

O-ureido-L-homoserine

canavaninosuccinate

L-arginino-succinate

citrate

prephenate

thiamine diphosphate

4-hydroxy-2-nonenal

isopentenyl diphosphate

prenyl diphosphate

imidazole acetol-phosphate

L-histidinol phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

dimethylsulfoniopropanoate

4-acetamidobutanal

4-acetamidobutanoate

D-glucurono-6,3-lactone

prop-2-ynal

propynoate

3,4-dihydroxyphenylacetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxyindole acetate

imidazole acetaldehyde

4-imidazoleacetate

oxaloacetate

3-oxopropanoate

hydroxypyruvate

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

carbonic acid

H₂O

coproporphyrinogen III

CO₂

(2E,6E)-farnesyl diphosphate

pristanate

4-(2-iminoethyl)phenol

4-[(2Z)-2-(methylimino)ethyl]phenol

2-iminosuccinate

2-iminopropanoate

2-iminobutanoate

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

superoxide

nitric oxide

monodehydroascorbate radical

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

N-acetyl-β-neuraminate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

phenylacetate

ethylphosphate

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

adenosylcobalamin

cob(I)alamin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-6A

cobalt-precorrin-4

chlorophyllide a

protochlorophyllide a

Mg-protoporphyrin

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

magnesium-protoporphyrin IX 13-monomethyl ester

adenosylcobalamin 5'-phosphate

cob(II)yrinate c-monoamide

cobyrinate

cobalt-precorrin-5A

cobalt-precorrin-5B

cob(I)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobyrate

cob(II)yrinate a,c-diamide

cobalt-precorrin-2

cobalt-precorrin-3

cobalt-sirohydrochlorin

cobalt-factor III

protoheme

N₂

hydrogen cyanide

protoporphyrinogen IX

protoporphyrin IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

siroheme

Hg⁰

hydrogen sulfide

oxygen

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

S-(hydroxymethyl)glutathione

dimethyl sulfide

methionol

3-(methylsulfanyl)propanal

3-dimethylsulfoniopropionaldehyde

glutathione

thiocyanate

methanethiol

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

sulfoacetaldehyde

L-cysteate

3-sulfopyruvate

3-(N-morpholino)propanesulfonate

isethionate

1-butanesulfonate

(R)-S-lactoylglutathione

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2S)-2-phospholactate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

chloride

phosphate

triphosphate

diphosphate

Fe³⁺

ammonium

H⁺

K⁺

Fe²⁺

Co²⁺

Hg²⁺

Cd²⁺

Zn²⁺

Cu²⁺

Mg²⁺

N-acetyl-D-mannosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

1-oleoyl-2-lyso-glycerone phosphate

(R)-citramalate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

(R)-2-hydroxyglutarate

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

4-methylphenol

hippurate

L-homocysteine

hypoglycin B

L-α-amino-ε-keto-pimelate

L-serine

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

L-proline

glycine

L-glutamine

L-alanine

L-leucine

D-glutamate

L-glutamate

L-norvaline

L-arginine

L-lysine

L-histidine

L-aspartate

L-asparagine

L-tyrosine

L-threonine

L-cysteine

L-tryptophan

L-phenylalanine

D-proline

D-aspartate

D-alanine

L-saccharopine

seleno-L-homocysteine

L-2-amino-3-oxobutanoate

L-aspartyl-4-phosphate

L-threonine 3-O-phosphate

3-phospho-L-serine

sarcosine

N⁶,N⁶-dimethyl-L-arginine

N-carbamoylglycine

N-formyl-L-glutamate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-methionine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

O-acetyl-L-homoserine

L-citrulline

L-isoleucine

L-valine

hypoglycin A

1-aminocyclopropane-1-carboxylate

O-phospho-L-homoserine

S-sulfo-L-cysteine

L-canaline

L-glutamate-5-semialdehyde

L-homoserine

O-succinyl-L-homoserine

L-ornithine

L-aspartate 4-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-methionine

L-2,4-diaminobutanoate

L-cystathionine

L-isoglutamine

L,L-diaminopimelate

glycine betaine

betaine aldehyde hydrate

choline

choline sulfate

betaine aldehyde

4-[(Z)-2-aminoethenyl]phenol

4-[(E)-2-(methylamino)ethenyl]phenol

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

4-aminobutanal

N-acetylputrescine

putrescine

tyramine

2-phenylethylamine

serotonin

sn-glycero-3-phosphocholine

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

fluoroacetaldehyde

fluoroacetate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

3-chloro-cis,cis-muconate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

(S)-2-chloropropanoate

5-chlorosalicylate

4-chlorosalicylate

4-chlorocatechol

allantoate

acetamide

(S)-(+)-allantoin

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

nicotinamide

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

cholest-4-en-3-one

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

campesterol

progesterone

17-β-hydroxy-5-α-androstan-3-one

campest-4-en-3β-ol

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

3-dehydrocholate

isocholate

glycocholate

cholate

cholest-5-en-3-one

17-α-hydroxyprogesterone

(+)-7-epi-jasmonate

(indol-3-yl)acetate

(S)-3-aminobutanoyl-CoA

phenylacetyl-CoA

3-hydroxypropanoyl-CoA

acryloyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(2E,5Z)-tetradecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

dihomo γ-linolenoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

4-hydroxybenzoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

(R)-2-hydroxyglutaryl-CoA

(E)-glutaconyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

3'-dephospho-CoA

malonyl-CoA

isovaleryl-CoA

isobutanoyl-CoA

2-methylbutanoyl-CoA

(3S)-citryl-CoA

succinyl-CoA

2-methylacetoacetyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

methylacrylyl-CoA

acetyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-octadec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(S)-malyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

hexanoyl-CoA

lauroyl-CoA

decanoyl-CoA

octanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxooctadecanoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

L-galactono-1,4-lactone

trans-dienelactone

cis-dienelactone

D-galactono-1,4-lactone

D-glucono-1,5-lactone

FADH₂

FAD

FMN

FMNH₂

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

ubiquinol-10

ubiquinol-7

ubiquinol-6

ubiquinol-8

ubiquinol-9

menaquinol-13

menaquinol-12

menaquinol-11

menaquinol-10

menaquinol-6

menaquinol-9

menaquinol-7

menaquinol-8

demethylmenaquinol-13

demethylmenaquinol-12

demethylmenaquinol-11

demethylmenaquinol-10

demethylmenaquinol-6

demethylmenaquinol-9

demethylmenaquinol-7

demethylmenaquinol-8

3-demethylubiquinol-10

3-demethylubiquinol-7

3-demethylubiquinol-8

3-demethylubiquinol-9

coenzyme A

oxidized coenzyme F₄₂₀-2

oxidized coenzyme F₄₂₀-1

oxidized coenzyme F₄₂₀-0

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

L-ascorbate

riboflavin

nicotinate

thiamine

pyridoxal

pyridoxal 5'-phosphate

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine

pyridoxine 5'-phosphate

(S)-1-pyrroline-5-carboxylate

precorrin-1

precorrin-7

precorrin-8x

precorrin-6B

precorrin-4

precorrin-2

precorrin-3A

precorrin-3B

precorrin-5

precorrin-6A

sirohydrochlorin

hydantoin

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

adenine

guanine

2'-deoxyadenosine

2'-deoxyinosine

2'-deoxyguanosine

guanosine

inosine

xanthosine

adenosine

hypoxanthine

dGMP

dAMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

XMP

GMP

IMP

AMP

ITP

GTP

ATP

orotate

dTTP

dUTP

dCTP

dCMP

CTP

dUDP

dCDP

CDP

dTDP

uridine 3'-monophosphate

cytidine-3'-monophosphate

UDP

dTMP

dUMP

5,6-dihydrothymine

5,6-dihydrouracil

cytosine

UTP

uracil

UDP-α-D-galacturonate

UDP-α-D-galactofuranose

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-galactose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-glucuronate

UDP-β-L-iduronate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-sulfoquinovopyranose

UDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

CDP-4-dehydro-6-deoxy-α-D-glucose

CDP-α-D-glucose

CDP-α-D-paratose

CDP-α-tyvelose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

5-fluorouracil

cytidine

uridine

2'-deoxycytidine

thymidine

2'-deoxyuridine

thymine

CMP

UMP

N¹-methyladenine

N3-methylcytosine

N¹-ethyladenine

preQ₁

baicalein

6,7-dehydrobaicalein

coumarin

scopoletin

4-methylumbelliferone

preQ₀

(indole-3-yl)acetonitrile

propionitrile

3-cyanopyridine

acrylonitrile

neolinustatin

lotaustralin

linustatin

linamarin

taxiphyllin

2-hydroxy-2-methylpropanenitrile

(2R)-2-hydroxy-2-methylbutanenitrile

n-butyronitrile

salicylaldehyde

benzene

4-hydroxybenzoate

urate

4-tyrosol

metanephrine

normetanephrine

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

benzaldehyde

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

hydroquinone

2,3-dihydroxybenzoate

protocatechuate

dopamine

(R)-adrenaline

(R)-noradrenaline

catechol

4-methylcatechol

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxymandelate

coumarinate

salicylate

4-aminobenzoate

benzoate

chorismate

maleate

fumarate

succinate

(R)-malate

(S)-malate

D-glucarate

3-(carbamoylamino)-2-methylpropanoate

3-carboxy-cis,cis-muconate

trans-aconitate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

cis-aconitate

D-threo-isocitrate

(R)-2-hydroxybutanoate

(R)-3-hydroxybutanoate

(S)-lactate

(R)-lactate

pyruvate

acetate

formate

propanoate

butanoate

decanoate

octanoate

(2E,6E)-farnesoate

3-oxoadipate

(15Z)-tetracosenoate

oleate

(3E,5Z)-tetradecadienoate

γ-linolenate

di-homo-γ-linolenate

linoleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

phytenate

stearate

palmitate

leukotriene-D4

leukotriene-E4

D-mannonate

D-gluconate

(R)-pantoate

5-deoxy-D-glucuronate

D-tagaturonate

aldehydo-D-glucuronate

aldehydo-D-galacturonate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

4-(methylsulfanyl)-2-oxobutanoate

2-oxobutanoate

glyoxylate

2-oxoglutarate

(R)-4-hydroxy-4-methyl-2-oxoglutarate

a coenzyme-A group

methylglyoxal

diacetyl

acetone

pyrroloquinoline quinone

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

(R)-acetoin

3-(N-morpholino)propanal

glycolaldehyde

(2E,6E)-farnesal

butan-1-al

isobutanal

1-propanal

formaldehyde

acetaldehyde

1-octanal

(S)-lactaldehyde

phytenal

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-ribopyranose

α-D-galactopyranose

β-D-galactopyranose

α-L-rhamnopyranose

β-L-rhamnopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

butan-1-ol

methanol

propan-1-ol

ethanol

phytol

glycerol

erythritol

xylitol

D-mannitol

D-sorbitol

(3R)-linalool

(3S)-linalool

(R,R)-2,3-butanediol

1D-chiro-inositol

scyllo-inositol

myo-inositol

1-keto-D-chiro-inositol

scyllo-inosose

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

geranyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

15-cis-phytoene

3-oxo-24-ethyl-26-al-cholest-4-ene

3-oxo-24-ethyl-cholest-4-en-26-oate

3,24-dioxo-cholest-4-en-26-oate

3-oxo-24-(isopropanoyl)-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-ethyl-cholest-4-en-26-oyl-CoA

3-oxo-24-ethyl-26-hydroxy-cholest-4-ene

sitosterol

3-oxo-24-ethyl-cholest-5-ene

3-oxo-24-ethyl-cholest-4-ene

3-octaprenyl-4-hydroxybenzoate

α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

betanidin

betanidin quinone

(S)-nicotine

iron(III) dicitrate

ferric-enterobactin complex

streptomycin

kanamycin B

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

XLLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

raffinose

maltotriose

stachyose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

α-maltose

allolactose

melibiose

sucrose

α,α-trehalose

α-lactose

β-D-cellobiose

1,5-anhydro-D-mannitol

keto-L-sorbose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

β-D-fructofuranose

L-xylulose

D-xylulose

L-ribulose

3-dehydro-D-glucopyranose

3'-ketolactose

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

N-monoacetylchitobiose 6'-phosphate

N,N'-diacetylchitobiose 6'-phosphate

α,α-trehalose 6-phosphate

β-D-cellobiose 6'-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

GDP-α-D-glucose

ADP-α-D-glucose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

4-phospho-D-erythronate

D-sedoheptulose 1,7-bisphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

D-tagatofuranose 1,6-bisphosphate

β-D-fructose 1,6-bisphosphate

D-allulose 6-phosphate

salicin 6-phosphate

arbutin-6-phosphate

D-tagatofuranose 6-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

aldehydo-D-allose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

L-xylulose 5-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate