an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
xanthine
H2O
urocanate
urea
tryptamine
thiamine diphosphate
thiamine phosphate
tartronate semialdehyde
L-tartrate
succinate semialdehyde
shikimate 3-phosphate
shikimate
selenophosphate
scopolin
S-adenosyl-4-methylsulfanyl-2-oxobutanoate
S-acetyldihydrolipoamide
(R)-4'-phosphopantothenoyl-L-cysteine
(R)-1-amino-2-propanol O-2-phosphate
quinolinate
(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate
pyrazine-2-carboxylate
pseudouridine 5'-phosphate
prephenate
porphobilinogen
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
phosphoenolpyruvate
3'-phosphoadenylyl-sulfate
(R)-pantothenate
4'-phosphopantetheine
5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
(E)-4-coumaroyl-CoA
glutathione disulfide
oxalosuccinate
oxalate
oxaloacetate
orotidine 5'-phosphate
hydroxypyruvate
O-ureido-L-homoserine
norspermidine
N,N-dimethylaniline-N-oxide
N,N-dimethylaniline
β-nicotinate D-ribonucleotide
naphthalene-1,2-diol
N6'-acetylkanamycin-B
N2acetyl-L-2-aminoadipate 6-phosphate
N2-succinylglutamate
N-succinyl-L,L-2,6-diaminopimelate
N-succinyl-2-amino-6-ketopimelate
N-acetylglutamyl-phosphate
N-acetyl-D-galactosamine 6-phosphate
N2-acetyl-L-2-aminoadipate semialdehyde
N-(5-phosphoribosyl)-anthranilate
(E)-3-(methoxycarbonyl)pent-2-enedioate
2-methylbutanal
methylamine
meso-tartrate
3-oxopropanoate
lipoamide
lipid IVA
L-histidinol phosphate
L-gulono-1,4-lactone
γ-L-glutamyl 5-phosphate
L-dehydro-ascorbate
L-arginino-succinate
3-deoxy-D-manno-octulosonate 8-phosphate
3-deoxy-α-D-manno-2-octulosonate
itaconate
isochorismate
isobutanol
indoxyl
indole-3-glycol
imidazole acetol-phosphate
preuroporphyrinogen
(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate
hydrogen peroxide
H2
4-amino-2-methyl-5-pyrimidinemethanol
histidinol
histidinal
carbonic acid
glycolate
glutathionylspermidine
(S)-4-amino-5-oxopentanoate
α-D-glucosamine 1-phosphate
γ-butyrobetaine
formamide
ethanolamine
enol-phenylpyruvate
(E)-2-benzylidenesuccinyl-CoA
5,6-dimethylbenzimidazole
autoinducer 2
1-deoxy-L-glycero-tetrulose 4-phosphate
glycerone phosphate
dihydrolipoamide
(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate
7,8-diaminopelargonate
2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
(S)-dihydroorotate
dethiobiotin
isopentenyl diphosphate
(S)-2,3,4,5-tetrahydrodipicolinate
3-dehydroquinate
2-dehydro-3-deoxy-D-galactonate 6-phosphate
nicotinate adenine dinucleotide
3-dehydro-2-deoxy-D-gluconate
2-deoxygluconate
D-galactosamine-6-phosphate
D-erythro-imidazole-glycerol-phosphate
6-phospho D-glucono-1,5-lactone
crotono-betaine
creatinine
trans-O-hydroxybenzylidenepyruvate
1,6-anhydro-N-acetyl-β-muramate
S-succinyl-dihydrolipoamide
2,3-didehydroadipyl-CoA
5-methylcytosine
N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate
carboxynorspermidine
2-isopropylmaleate
3-methylbenzaldehyde
DNA without lesion
AP site on DNA created by glycosylase in repair process
5-dehydro-2-deoxy-D-gluconate
β-D-ribosylnicotinate
N2-succinyl-L-glutamate 5-semialdehyde
N-ethylammelide
N-ethylammeline
deethylsimazine
(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate
(4Z)-2-oxohept-4-enedioate
(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate
4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate
cis-coumarinic acid-β-D-glucoside
muconolactone
(2S)-2-isopropyl-3-oxosuccinate
2-phenylethanol
2-methylbutanol
3-methylbutanol
3-methylbutanal
hydrogenobyrinate a,c-diamide
hydrogenobyrinate
hydrogen selenide
2-phosphoglycolate
2-hydroxy-3-oxosuccinate
2,5-dioxopentanoate
5-dehydro-2-deoxy-D-gluconate 6-phosphate
methylsalicylate
5-amino-6-(5-phospho-D-ribosylamino)uracil
S-ribosyl-L-homocysteine
5-(methylsulfanyl)-α-D-ribose
pimeloyl-CoA
α-D-galacturonate 1-phosphate
pseudouridine
N-acetyl-L-glutamate 5-semialdehyde
prephytoene diphosphate
S-methyl-5-thio-α-D-ribose 1-phosphate
prenyl diphosphate
N6-(Δ2-isopentenyl)-adenosine 5'-monophosphate
3'-ketosucrose
2-keto-D-gluconate
4-pyridoxolactone
4-acetamidobutanoate
2-dehydro-6-phospho-D-gluconate
2,3-dioxo-L-gulonate
L-xylo-hex-3-ulono-1,4-lactone
propane-1,3-diamine
4-acetamidobutanal
D-gluconate 6-phosphate
2-maleylacetate
nicotine-1'-N-oxide
(indol-3-yl)acetamide
L-β-lysine
(2S)-2-{[1-(R)-carboxyethyl]amino}pentanoate
2-pyrone-4,6-dicarboxylate
gallate
sym-homospermidine
4-methylumbelliferyl acetate
salicyl alcohol
(S)-5-amino-3-oxohexanoate
5-deoxy-α-ribose 1-phosphate
(+)-muconolactone
(3R,6R)-1,3,4,6-tetrachlorocyclohexa-1,4-diene
(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA
cyclic-2,3-O-oxalyl-L-threonate
2-carboxy-L-xylonolactone
2-carboxy-L-threo-pentonate
cyclic- 3,4-O-oxalyl-L-threonate
dehydroascorbate (bicyclic form)
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA
3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA
L-selenocystathionine
3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate
2-iminoacetate
3-(4-hydroxyphenyl)-3-oxo-propionyl-CoA
(S)-mandelate
3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA
(R)-mandelate
5-methoxyindoleacetaldehyde
5-methoxytryptamine
3-methoxy-4-hydroxyphenylglycolaldehyde
5-hydroxytryptophol
5-hydroxyindole thiazolidine carboxylate
4-methylumbelliferyl glucoside
digallate
(S)-ureidoglycolate
5-amino-6-(5-phospho-D-ribitylamino)uracil
4-methyl-3-oxoadipate
4-methyl-3-oxoadipate-enol-lactone
4-methylmuconolactone
4-hydroxy-2-nonenal
(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
(3S,5S)-3,5-diaminohexanoate
5-methylsalicylate
4-chloro-2-methyl-cis,cis-muconate
2-chloro-4-methyl-cis,cis-muconate
protoanemonin
2,4-dichloro-cis,cis-muconate
4-methylsalicylate
iminodiacetate
nitrilotriacetate
(5R)-5-benzyl-hydantoin
(5S)-5-benzyl-hydantoin
coproporphyrinogen III
citrate
cis,cis-muconate
(1R,2S)-1,2-dihydronaphthalene-1,2-diol
chloroacetaldehyde
chloramphenicol
2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA
carbon monoxide
CO2
carbamoyl phosphate
canavaninosuccinate
L-canavanine
lipid X
lipid A disaccharide (E. coli)
benzoylsuccinyl-CoA
arachidonoyl-CoA
adenosine 5'-phosphosulfate
anthranilate
ammonia
5-amino-6-(D-ribitylamino)uracil
4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine
4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine
α-ribazole 5'-phosphate
α-ribazole
O-acetyl-L-serine
acetyl phosphate
N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol
8-amino-7-oxononanoate
2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine
5-amino-1-(5-phospho-β-D-ribosyl)imidazole
N1-(5-phospho-β-D-ribosyl)glycinamide
N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide
5-phospho-β-D-ribosylamine
5-oxo-L-proline
S-methyl-5'-thioadenosine
5-dehydro-4-deoxy-D-glucarate
5-hydroxyindole acetaldehyde
5-dehydro-D-gluconate
5-aminolevulinate
(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate
4-phosphooxy-L-threonine
(R)-4'-phosphopantothenate
4-oxoglutaramate
4-methylbenzyl alcohol
4-imidazolone-5-propanoate
4-hydroxybenzaldehyde
4-aminobutanoate
4-amino-4-deoxychorismate
(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate
3,4-dihydroxyphenylacetaldehyde
3-ureidopropanoate
3-phosphooxypyruvate
(4,5-dihydro-5-oxofuran-2-yl)-acetate
3-hydroxybenzyl alcohol
3-hydroxybenzaldehyde
3-methylbenzyl alcohol
acetoacetate
indole-3-glycol aldehyde
5-enolpyruvoyl-shikimate 3-phosphate
3-deoxy-D-arabino-heptulosonate 7-phosphate
3-dehydroshikimate
(2S)-2-isopropylmalate
adenosine 3',5'-bisphosphate
4-methyl-2-oxopentanoate
2-C-methyl-D-erythritol-2,4-cyclodiphosphate
(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol
(1S,4R)-2,4,5-trichloro-2,5-cyclohexadiene-1-diol
3-methyl-2-oxobutanoate
(S)-3-methyl-2-oxopentanoate
2-dehydro-3-deoxy-D-gluconate 6-phosphate
2-dehydropantoate
2-dehydro-3-deoxy-D-gluconate
2-dehydro-3-deoxy-D-galactonate
(2R,3S)-3-isopropylmalate
(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate
2-chloroethanol
2-C-methyl-D-erythritol 4-phosphate
(2S)-2-amino-3-oxo-4-phosphooxybutanoate
2-(α-hydroxyethyl)thiamine diphosphate
(S)-2-acetolactate
(S)-2-aceto-2-hydroxybutanoate
1,2,4-trichlorobenzene
1,2-dichloroethane
(R)-2,3-dihydroxy-3-methylpentanoate
3-amino-1-hydroxyacetone 1-phosphate
riboflavin
thiamine
nicotinamide
nicotinate
L-ascorbate
all-trans-retinol
5,6,7,8-tetrahydrofolate
tetrahydropteroyl tri-L-glutamate
(6S)-5-formyl-tetrahydrofolate mono-L-glutamate
5,10-methylenetetrahydropteroyl mono-L-glutamate
10-formyl-tetrahydrofolate mono-L-glutamate
5-methyltetrahydropteroyl mono-L-glutamate
5-methyltetrahydropteroyl tri-L-glutamate
7,8-dihydrofolate monoglutamate
N10-formyldihydrofolate
pyridoxine
pyridoxal 5'-phosphate
pyridoxine 5'-phosphate
pyridoxamine
pyridoxamine 5'-phosphate
pyridoxal
L-carnitine
3-oxo-4-pregnene-20-carboxyl-CoA
3,22-dioxochol-4-en-24-oyl-CoA
22-hydroxy-3-oxochol-4-en-24-oyl-CoA
3,24-dioxocholest-4-en-26-oyl-CoA
24-hydroxy-3-oxocholest-4-en-26-oyl-CoA
(25S)-3-oxocholest-4-en-26-oyl-CoA
(25S)-3-oxocholest-4-en-26-oate
glycocholate
cholate
salicylaldehyde
kanamycin B
α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA
α-Kdo-(2→6)-lipid IVA
ferrichrome
coumarin
scopoletin
4-methylumbelliferone
(S)-nicotine
torulene
apo-4'-lycopenal
all-trans-phytoene
all-trans-3,4-didehydrolycopene
15-cis-phytoene
neurosporaxanthin
apo-4'-lycopenoate
geranyl diphosphate
(3R)-linalool
(3S)-linalool
trans,octacis-decaprenyl phosphate
mono-trans,octa-cis-decaprenyl diphosphate
(2E,6E)-farnesyl diphosphate
all-trans-retinyl palmitate
ammonium hydroxide
(glutathion-S-yl)-4-hydroxy-2-nonenal
superoxide
nitric oxide
monodehydroascorbate radical
hydroxyl radical
DNA with lesion
hippurate
4-methylphenol
L-homocysteine
cobalt-precorrin-7
cobalt-precorrin-5B
cobalt-precorrin-8
cobalt-precorrin-6B
cobalt-precorrin-6A
cobalt-precorrin-5A
cobalt-precorrin-4
cobalt-precorrin-3
cobalt-precorrin-2
cob(I)yrinate a,c-diamide
adenosylcobyrate
adenosyl-cob(III)yrinate a,c-diamide
cob(II)yrinate a,c-diamide
cob(II)yrinate c-monoamide
cob(I)inamide
cobalt-sirohydrochlorin
cobalt-factor III
adenosyl-cobinamide phosphate
adenosylcobinamide-GDP
adenosylcobinamide
adenosylcobalamin 5'-phosphate
hemin
adenosylcobalamin
cob(I)alamin
cobyrinate
protoheme
bromochloromethane
5'-deoxy-5'-fluoroadenosine
5-fluoro-5-deoxy-D-ribose 1-phosphate
fluoroacetate
fluoroacetaldehyde
3-chloro-cis,cis-muconate
5-chloro-5-deoxy-D-ribonate
3,5-dichloro-2-methyl-muconate
3,5-dichloro-2-methyl-muconolactone
2-chloro-5-methyl-dienelactone
(+)-2-chloromuconolactone
(+)-5-chloromuconolactone
2,3,5-trichloro-cis,cis-muconate
2,3-dichloro-cis,cis-muconate
2-chloroacetate
2,5-dichloro-cis,cis-muconate
2-chloro-cis,cis-muconate
2-chloromaleylacetate
(1R,2S)-3,6-dichlorocyclohexa-3,5-diene-1,2-diol
5-chloro-4-hydroxy-2-oxopentanoate
5-chloro-5-deoxyribose 1-phosphate
5'-chloro-5'-deoxyadenosine
3-chlorobenzyl alcohol
3,6-dichlorocatechol
1,4-dichlorobenzene
3-chlorobenzaldehyde
4-chlorosalicylate
2,5-dichlorophenol
5-chlorosalicylate
5-chloro-3-methylcatechol
3,5-dichlorocatechol
4-chlorocatechol
(S)-1-pyrroline-5-carboxylate
precorrin-7
precorrin-8x
precorrin-5
precorrin-3A
precorrin-1
precorrin-6A
precorrin-2
precorrin-3B
precorrin-6B
precorrin-4
sirohydrochlorin
hydantoin
UTP
uracil
UDP
dTTP
dTMP
dTDP
orotate
dUTP
dUMP
dUDP
dCTP
dCMP
dCDP
cytosine
CTP
uridine 2'3'-cyclic monophosphate
cytidine 2',3'-cyclic monophosphate
CDP
5,6-dihydrothymine
5,6-dihydrouracil
cytidine-3'-monophosphate
uridine 3'-monophosphate
5-fluorouracil
UDP-α-D-glucuronate
UDP-N-acetyl-α-D-glucosamine-enolpyruvate
UDP-N-acetyl-α-D-muramoyl-L-alanine
UDP-α-D-glucose
UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine
UDP-N-acetyl-α-D-mannosamine
UDP-α-D-galactofuranose
UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine
UDP-N-acetyl-α-D-muramate
UDP-α-D-galacturonate
UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate
UDP-β-L-iduronate
UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine
UDP-α-D-galactose
UDP-α-D-xylose
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-galactosamine
UDP-N-acetyl-α-D-glucosamine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate
UDP-N-acetyl-α-D-mannosaminuronate
dTDP-β-L-rhamnose
dTDP-α-D-glucose
dTDP-4-dehydro-6-deoxy-α-D-glucopyranose
dTDP-4-dehydro-β-L-rhamnose
CDP-α-D-glucose
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
thymine
cytidine
uridine
2'-deoxycytidine
2'-deoxyuridine
thymidine
CMP
UMP
guanine
adenine
purine
hypoxanthine
guanosine
inosine
xanthosine
adenosine
2'-deoxyinosine
2'-deoxyguanosine
2'-deoxyadenosine
dGDP
dADP
dIDP
dGMP
dAMP
dITP
dGTP
dATP
ITP
GTP
ATP
XMP
IMP
GMP
AMP
IDP
GDP
ADP
(7,8-dihydropterin-6-yl)methyl diphosphate
7,8-dihydroneopterin 3'-triphosphate
7,8-dihydroneopterin 3'-phosphate
7,8-dihydroneopterin
7,8-dihydromonapterin
7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate
6-(hydroxymethyl)-7,8-dihydropterin
(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin
7,8-dihydropteroate
MoO2-molybdopterin cofactor
guanylyl molybdenum cofactor
6,7-dimethyl-8-(1-D-ribityl)lumazine
reduced riboflavin
FMNH2
FADH2
FMN
FAD
2-hydroxychromene-2-carboxylate
S-(hydroxymethyl)glutathione
dimethyl sulfide
methionol
3-(methylsulfanyl)propanal
thiocyanate
thiophenol
methanethiol
furfuryl thiol
thiobenzoate
glutathione
thioanisole
furfuryl methyl sulfide
(S)-methyl thiobenzoate
2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate
5-(2-hydroxyethyl)-4-methylthiazole
4-methyl-5-(2-phosphooxyethyl)thiazole
2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate
taurine
L-cysteate
3-sulfopyruvate
isethionate
methanesulfonate
1-butanesulfonate
(R)-S-lactoylglutathione
L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine
L-cysteinylglycine
N-acetyl-L-glutaminyl-L-glutamine
N-acetyl-L-glutaminyl-L-glutamine amide
D-alanyl-D-alanine
γ-L-glutamyl-L-cysteine
nitrous oxide
hydrogen cyanide
2,4-dinitrophenyl-S-glutathione
chloramphenicol 3-acetate
1-chloro-2,4-dinitrobenzene
linamarin
neolinustatin
linustatin
taxiphyllin
lotaustralin
2-hydroxy-2-methylpropanenitrile
(2R)-2-hydroxy-2-methylbutanenitrile
pristanate
uroporphyrinogen-III
protoporphyrin IX
protoporphyrinogen IX
uroporphyrinogen-I
coproporphyrinogen I
siroheme
(Z,Z)-biliverdin-IX α
(3E,5Z)-tetradeca-3,5-dienoyl-CoA
(3E)-dec-3-enoyl-CoA
(5E)-3-oxo-dodec-5-enoyl-CoA
(3R)-hydroxy-5-trans-dodecenoyl-CoA
(3Z,5E)-dodeca-3,5-dienoyl-CoA
5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA
(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA
4-trans-3-oxo-undecenoyl-CoA
4-trans-undecenoyl-CoA
6-trans-3-oxo-tridecenoyl-CoA
2-trans-6-trans-tridecadienoyl-CoA
4-cis-undecenoyl-CoA
6-cis, 3-oxo-tridecenoyl-CoA
2-trans,6-cis-tridecadienoyl-CoA
2-trans-nonenoyl-CoA
(3R)-hydroxy, 4-trans-undecenoyl-CoA
2-trans, 4-trans-undecadienoyl-CoA
(3R)-hydroxy-nonanoyl-CoA
(3R)-hydroxy-undecanoyl-CoA
(3E)-undec-2-enoyl-CoA
(3R)-hydroxy, 6-cis-tridecenoyl-CoA
(3R)-hydroxy, 6-trans-tridecenoyl-CoA
di-trans,octa-cis-undecaprenyl phosphate
all-trans-octaprenyl diphosphate
geranylfarnesyl diphosphate
geranylgeranyl diphosphate
di-trans,octa-cis-undecaprenyl diphosphate
2-cis,6-trans,10-trans-geranylgeranyl diphosphate
3-octaprenyl-4-hydroxybenzoate
trimethyl sulfonium
Fe3+
H+
ammonium
K+
Cu2+
Zn2+
Fe2+
Mg2+
Co2+
sulfate
sulfite
selenide
thiosulfate
OH-
nitrite
nitrate
hydrogensulfite
hydrogencarbonate
molybdate
phosphonate
phosphate
diphosphate
triphosphate
bromide
chloride
oxygen
hydrogen sulfide
2-iminosuccinate
(+)-7-epi-jasmonate
(indol-3-yl)acetate
methyl (indol-3-yl)acetate
a coenzyme-A group
sn-glycero-3-phosphoethanolamine
glycerophosphoglycerol
glycerophosphoserine
sn-glycerol 3-phosphate
(R)-glycerate
3-phospho-D-glycerate
3-phospho-D-glyceroyl-phosphate
2,3-diphospho-D-glycerate
2-phospho-D-glycerate
3-methylglutaconyl-CoA
succinyl-CoA
methylacrylyl-CoA
malonyl-CoA
α-linolenoyl-CoA
L-carnitinyl-CoA
isovaleryl-CoA
isobutanoyl-CoA
glutaryl-CoA
(E)-glutaconyl-CoA
γ-butyrobetainyl-CoA
3'-dephospho-CoA
crotonobetainyl-CoA
(2E,5Z)-tetradecenoyl-CoA
(S)-3-aminobutanoyl-CoA
4-hydroxybenzoyl-CoA
linoleoyl-CoA
(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA
(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA
(+)-7-epi-jasmonoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA
itaconyl-CoA
(E)-2-methylcrotonoyl-CoA
acetyl-CoA
3-methylcrotonyl-CoA
(3S)-hydroxyadipyl-CoA
3-hydroxyisovaleryl-CoA
(S)-3-hydroxy-3-methylglutaryl-CoA
2-methylbutanoyl-CoA
2-methylacetoacetyl-CoA
(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA
(S)-methylmalonyl-CoA
(R)-methylmalonyl-CoA
phytenoyl-CoA
crotonyl-CoA
(2E)-octadec-2-enoyl-CoA
(2E)-dec-2-enoyl-CoA
(2E)-oct-2-enoyl-CoA
(3Z)-dodec-3-enoyl-CoA
oleoyl-CoA
2-carboxy-cerotoyl-CoA
cerotoyl-CoA
(Z)-15-tetracosenoyl-CoA
butanoyl-CoA
propanoyl-CoA
octanoyl-CoA
hexanoyl-CoA
lauroyl-CoA
decanoyl-CoA
palmitoyl-CoA
stearoyl-CoA
pristanoyl-CoA
(3R)-3-hydroxypentanoyl-CoA
(3R)-3-hydroxybutanoyl-CoA
(3R)-3-hydroxyoctadecanoyl-CoA
(S)-3-hydroxybutanoyl-CoA
(S)-3-hydroxyoctanoyl-CoA
(S)-3-hydroxyhexanoyl-CoA
(S)-3-hydroxydecanoyl-CoA
(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA
(S)-3-hydroxyhexadecanoyl-CoA
3-oxoadipyl-CoA
4-methyl-3-oxoadipyl-CoA
3-oxohexanoyl-CoA
3-oxododecanoyl-CoA
3-oxooctanoyl-CoA
3-oxodecanoyl-CoA
acetoacetyl-CoA
3-oxopentanoyl-CoA
3-oxooctadecanoyl-CoA
3-oxo-myristoyl-CoA
3-oxo-(5Z)-tetradecenoyl-CoA
3-oxo-palmitoyl-CoA
(S)-3-hydroxy-isobutanoyl-CoA
2-chloro-trans-dienelactone
L-galactono-1,4-lactone
2-methyl-trans-dienelactone
2-(2-chloro-4-methyl-5-oxofuran-2-yl)acetate
2-methyl-cis-dienelactone
5-chloro-3-methyl-cis-dienelactone
2-chloro-4-methyl-cis-dienelactone
2,5-dichloro-trans-dienelactone
5-chloro-trans-dienelactone
trans-dienelactone
2-chloro-cis-dienelactone
cis-dienelactone
D-glucono-1,5-lactone
indigo
coenzyme A
S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine
(S)-methylmalonate-semialdehyde
(R)-methylmalonate-semialdehyde
urate
toluene
naphthalene
4-tyrosol
8-hydroxypurine
6,8-dihydroxypurine
benzyl-6-hydroxy-2-cyclohexene-on-oyl
salicyl-6-hydroxy-2-cyclohexene-on-oyl
6-hydroxy-2-cyclohexen-one-carboxylate
4-vinylguaiacol
2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA
benzyl alcohol
4-hydroxybenzoate
demethylmenaquinol-11
demethylmenaquinol-7
demethylmenaquinol-12
demethylmenaquinol-9
demethylmenaquinol-8
demethylmenaquinol-13
demethylmenaquinol-10
demethylmenaquinol-6
ubiquinol-8
menaquinol-8
menaquinol-13
menaquinol-12
menaquinol-11
menaquinol-10
menaquinol-9
menaquinol-7
menaquinol-6
3-demethylubiquinol-8
6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol
2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol
ferulate
coumarinate
(indol-3-yl)acetaldehyde
indole
cis-indole-2,3-dihydrodiol
DIMBOA
DIMBOA-β-D-glucoside
(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate
metanephrine
3-methoxy-4-hydroxyphenylglycol
normetanephrine
4-methylcatechol
(R)-adrenaline
catechol
(R)-noradrenaline
3,4-dihydroxyphenylglycolaldehyde
dopamine
3,4-dihydroxyphenylglycol
protocatechuate
2,3-dihydroxybenzoate
serotonin
2-phenylethylamine
(4-hydroxyphenyl)acetaldehyde
benzaldehyde
phenylacetaldehyde
p-cumic aldehyde
4-methylbenzaldehyde
4-isopropylbenzyl alcohol
salicylate
benzoate
4-aminobenzoate
pyrazinamide
phosphoribulosylformimino-AICAR-phosphate
1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide
5-amino-4-imidazolecarboxyamide
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
1-(5-phospho-β-D-ribosyl)-ATP
1-(5-phospho-β-D-ribosyl)-AMP
8-oxo-dGTP
guanosine 2',3'-cyclic monophosphate
guanosine 3'-monophosphate
adenosine 2',3'-cyclic monophosphate
adenosine 3'-monophosphate
8-oxo-GTP
5'-deoxyadenosine
cyclic-AMP
adenylo-succinate
NADH
NADPH
NAD+
NADP+
β-nicotinamide D-ribonucleotide
2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA
2-sulfanyl-N6-dimethylallyladenosine37 in tRNA
2-hydroxy-dATP
cyclic di-3',5'-guanylate
5-fluorocytosine
GDP-α-D-mannose
GDP-4-dehydro-α-D-rhamnose
GDP-4-dehydro-6-deoxy-β-L-galactose
GDP-β-L-fucose
CMP-3-deoxy-β-D-manno-octulosonate
ADP-α-D-glucose
ADP-D-ribose
cyclic ADP-ribose
1-(β-D ribofuranosyl)nicotinamide
glycerol
D-ribitol
xylitol
D-sorbitol
L-iditol
galactitol
D-mannitol
D-xylulose
L-xylulose
D-ribulose
α-D-xylopyranose
aldehydo-D-ribose
β-D-ribofuranose
α-D-ribofuranose
keto-D-tagatose
keto-D-fructose
keto-L-sorbose
keto-D-sorbose
aldehydo-D-mannose
β-D-mannopyranose
aldehydo-D-glucose
β-D-glucopyranose
α-D-glucopyranose
β-D-galactopyranose
α-D-galactopyranose
β-D-fructofuranose
N-acetylmuramate
N-acetyl-α-D-muramoyl-L-alanine(1-)
N-acetyl-α-D-glucosamine 1-phosphate
N-acetyl-β-D-glucosamine
D-glyceraldehyde
glycolaldehyde
4-deoxy-L-threo-hex-4-enopyranuronate
maltotriose
β-D-cellobiose
raffinose
maltotetraose
stachyose
maltopentaose
maltohexaose
maltoheptaose
α-maltose
sucrose
melibiose
α,α-trehalose
aldehydo-D-galacturonate
decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide
3-dehydro-D-glucopyranose
5-phospho-α-D-ribose 1-diphosphate
D-erythrose 4-phosphate
4-phospho-D-erythronate
D-sedoheptulose 7-phosphate
1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate
D-tagatofuranose 1,6-bisphosphate
β-D-fructose 1,6-bisphosphate
α-D-ribose-1-phosphate
2-deoxy-α-D-ribose 1-phosphate
α-D-glucopyranose 1-phosphate
β-D-glucopyranose 1-phosphate
α-D-galactose 1-phosphate
β-D-fructofuranose 1-phosphate
α-D-mannose 1-phosphate
D-tagatofuranose 6-phosphate
β-D-fructofuranose 6-phosphate
D-fructose 6-phosphate
β-D-mannopyranose 6-phosphate
α-D-mannopyranose 6-phosphate
α-D-glucose 6-phosphate
β-D-glucose 6-phosphate
D-xylulose 5-phosphate
L-xylulose 5-phosphate
1-deoxy-D-xylulose 5-phosphate
D-ribulose 5-phosphate
aldehydo-D-arabinose 5-phosphate
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine
a peptidoglycan dimer (mycobacteria)
decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)
a peptidoglycan with L,D cross-links (mycobacteria)
a peptidoglycan with D,D cross-links (mycobacteria)
a peptidoglycan dimer (meso-diaminopimelate containing)
a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala
undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine
sucrose 6F-phosphate
sucrose 6G-phosphate
D-glyceraldehyde 3-phosphate
L-idonate
D-mannonate
aldehydo-L-galactonate
D-gluconate
D-altronate
L-gulonate
D-galactonate
L-α-amino-ε-keto-pimelate
D-serine
L-serine
glycine
L-tyrosine
L-threonine
L-glutamine
L-cysteine
L-asparagine
L-lysine
L-histidine
L-arginine
L-aspartate
L-glutamate
L-valine
L-tryptophan
L-proline
L-phenylalanine
L-methionine
L-leucine
L-selenocysteine
L-alanine
L-isoleucine
creatine
β-alanine
(S)-3-amino-2-methylpropanoate
(R)-3-amino-2-methylpropanoate
seleno-L-homocysteine
L-aspartyl-4-phosphate
D-nopaline
3-phospho-L-serine
D-octopine
mannopine
sarcosine
N-carbamoylglycine
N-acetyl-L-glutamate
N-acetyl-L-citrulline
N-acetyl-L-ornithine
formyl-L-isoglutamine
N-formyl-L-glutamate
N-formyl-L-methionine
N-formimino-L-glutamate
N-carbamoyl-L-aspartate
trans-4-hydroxy-L-proline
O-acetyl-L-homoserine
L,L-diaminopimelate
L-cystathionine
L-norvaline
L-isoglutamine
L-ornithine
D-glutamate
D-alanine
D-aspartate
L-citrulline
S-sulfo-L-cysteine
S-adenosyl-L-methionine
O-succinyl-L-homoserine
O-phospho-L-homoserine
L-glutamate-5-semialdehyde
L-canaline
L-aspartate 4-semialdehyde
L-4-hydroxyglutamate semialdehyde
L-homoserine
S-adenosyl-L-homocysteine
S-(4-hydroxy-nonenal-3-yl)-L-cysteine
meso-diaminopimelate
choline
choline sulfate
betaine aldehyde
glycine betaine
(2Z)-2-aminobut-2-enoate
agmatine
N-acetylputrescine
putrescine
spermidine
diacetyl
3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone
6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone
ubiquinone-8
(R)-acetoin
methylglyoxal
(Z)-3-hexanal
formaldehyde
1-octanal
1-propanal
acetaldehyde
isobutanal
butan-1-al
(R)-lactaldehyde
(S)-lactaldehyde
phytenal
(E)-2-hexenal
(E)-2-hexenol
(3Z)-hex-3-en-1-ol
methanol
ethanol
propan-1-ol
butan-1-ol
phytol
ethylene glycol
(R)-propane-1,2-diol
myo-inositol
1D-chiro-inositol
scyllo-inositol
1-keto-D-chiro-inositol
scyllo-inosose
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione
1D-myo-inositol 3-monophosphate
1D-myo-inositol 1-monophosphate
3-methyl-cis,cis-muconate
chorismate
D-galactarate
D-glucarate
succinate
fumarate
(S)-malate
3-(carbamoylamino)-2-methylpropanoate
3-carboxy-cis,cis-muconate
trans-aconitate
cis-2-methylaconitate
cis-aconitate
(2R,3S)-2-methylisocitrate
(1Z,3Z)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate
(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate
(3E,5R)-5-carboxy-2-oxohept-3-enedioate
(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate
2-hydroxy-4-oxobutane-1,2,4-tricarboxylate
D-threo-isocitrate
propanoate
formate
acetate
pyruvate
(R)-lactate
(S)-lactate
butanoate
(R)-pantoate
5-deoxy-D-glucuronate
D-tagaturonate
aldehydo-D-glucuronate
decanoate
octanoate
(R)-3-hydroxybutanoate
(15Z)-tetracosenoate
oleate
(3E,5Z)-tetradecadienoate
(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate
(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate
(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate
(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate
(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate
(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate
linoleate
arachidonate
α-linolenate
(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate
phytenate
stearate
palmitate
3-oxoadipate
3-(4-hydroxyphenyl)pyruvate
3-phenyl-2-oxopropanoate
glyoxylate
2-oxoglutarate
2-oxobutanoate
(S)-NADHX
(R)-NADHX
5,10-methenyltetrahydrofolate mono-L-glutamate
(S)-4-hydroxymandelate
(R)-4-hydroxymandelate
3-(all-trans-octaprenyl)benzene-1,2-diol
(S)-3-hydroxy-isobutanoate
2-octaprenylphenol
2-methoxy-6-(all-trans-octaprenyl)phenol
AP site removed from DNA