an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

4-oxoglutaramate

(3E)-2-oxopent-3-enoate

2,6-dioxo-6-phenylhexa-3-enoate

2-carboxy-L-xylonolactone

cyclic-2,3-O-oxalyl-L-threonate

5-hydroxyindole thiazolidine carboxylate

enol-phenylpyruvate

cyclic- 3,4-O-oxalyl-L-threonate

2-carboxy-L-threo-pentonate

bisorganyltrisulfane

H₂O

O-acetyl-L-serine

ManNAc-GlcNAc-PP-undecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

thiamine diphosphate

thiamine phosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

nicotinate adenine dinucleotide

CO₂

phosphoenolpyruvate

prenyl diphosphate

hydrogen peroxide

(S)-2,3,4,5-tetrahydrodipicolinate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

3-dehydroquinate

3-dehydroshikimate

shikimate

glycerone phosphate

isopentenyl diphosphate

xanthine

carbamoyl phosphate

2-keto-D-gluconate

salicyl alcohol

methylsalicylate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

2,3-dioxo-L-gulonate

3-keto-L-gulonate

5-dehydro-4-deoxy-D-glucarate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol aldehyde

indole-3-glycol

isobutanol

3-methylbutanal

3-methylbutanol

2-methylbutanal

2-methylbutanol

2-phenylethanol

L-histidinol phosphate

imidazole acetol-phosphate

2,5-didehydro-D-gluconate

3-phosphooxypyruvate

glycolate

4-methylumbelliferyl glucoside

4-hydroxybenzaldehyde

scopolin

cis-coumarinic acid-β-D-glucoside

isoquinolin-2(1H)-one

isoquinoline

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

oxaloacetate

histidinol

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

coniferaldehyde

γ-L-glutamyl 5-phosphate

acetoacetate

oxalate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

cyclopentanone

cyclopentanol

urea

(S)-ureidoglycolate

4-aminobutanoate

4-guanidinobutanoate

4-methyl-2-oxopentanoate

2-dehydropantoate

3-methyl-2-oxobutanoate

L-canavanine

(R)-mandelate

(R)-mandelamide

succinate semialdehyde

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

1,5-anhydro-D-fructose

benzylamine

N-benzylformamide

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

anthranilate

N-(5-phosphoribosyl)-anthranilate

3-deoxy-D-arabino-heptulosonate 7-phosphate

S-acetyldihydrolipoamide

dihydrolipoamide

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

2-dehydro-3-deoxy-D-gluconate

3-keto-β-D-galactose

5-enolpyruvoyl-shikimate 3-phosphate

5-amino-6-(D-ribitylamino)uracil

quinolinate

propane-1,3-diamine

N-succinyl-L,L-2,6-diaminopimelate

hexulose 6-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropylmalate

2-isopropylmaleate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

(S)-dihydroorotate

3'-phosphoadenylyl-sulfate

adenosine 3',5'-bisphosphate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

15-cis-4,4'-diapophytoene

carbonic acid

shikimate 3-phosphate

L-arogenate

acetyl phosphate

2-amino-3-carboxymuconate-6-semialdehyde

3-hydroxyanthranilate

citrate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

L-gulono-1,4-lactone

N-carbamoylputrescine

5'-phosphoguanylyl(3'→5')guanosine

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

lipid A disaccharide (E. coli)

lipid X

coproporphyrinogen III

L-arginino-succinate

canavaninosuccinate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

O-ureido-L-homoserine

histamine

tartronate semialdehyde

hydroxypyruvate

H₂

4-pyridoxolactone

2-C-methyl-D-erythritol 4-phosphate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

L-selenocystathionine

1-phosphatidyl-myo-inositol 2-mannose

1-phosphatidyl-myo-inositol

D-gluconate 6-phosphate

2-oxopropyl-CoM

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

homogentisate

(2-hydroxyphenyl)acetate

1-pyrroline

oxalosuccinate

3-amino-1-hydroxyacetone 1-phosphate

1-O-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol 3-phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-pyrimidinemethanol

N-acetyl-β-glucosaminylamine

N⁴-(β-N-acetyl-D-glucosaminyl)-L-asparagine

methylamine

ethylamine

N-ethylglycine

2-iminoacetate

glutarate

(7R)-7-(4-carboxybutanamido)cephalosporanate

N-carbamoyl-2-oxoglycine

hydrogen selenide

preuroporphyrinogen

porphobilinogen

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

isochorismate

α-ribazole

α-ribazole 5'-phosphate

lipid IV_A

carbon monoxide

2-protocatechuoylphloroglucinolcarboxylate

2-dehydro-3-deoxy-D-galactonate

4-amino-4-deoxychorismate

urocanate

4-imidazolone-5-propanoate

N-acetyl-D-muramate 6-phosphate

N-succinyl-2-amino-6-ketopimelate

ammonia

(R)-4'-phosphopantothenate

(R)-pantothenate

6-aminohexanoate

6-aminohexanoate linear dimer

3-deoxy-D-glycero-2,5-hexodiulosonate

1,4-dihydroxy-2-naphthoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

formamide

4'-phosphopantetheine

orotidine 5'-phosphate

histidinal

N-Formyl-L-kynurenine

(R)-piperazine-2-carboxylate

β-alaninamide

tert-butylamine

ethanolamine

4-imidazoleacetate

imidazole acetaldehyde

5-hydroxyindole acetate

3,4-dihydroxyphenylacetaldehyde

propynoate

prop-2-ynal

D-glucurono-6,3-lactone

4-acetamidobutanoate

4-acetamidobutanal

dimethylsulfoniopropanoate

2-(α-hydroxyethyl)thiamine diphosphate

1,4-dihydroxy-2-naphthoate

3-mercaptopyruvate

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

estrone 3-sulfate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

3-ureidopropanoate

FK-506

31-O-desmethylFK-506

4-fumaryl-acetoacetate

(4S)-4-hydroxy-2-oxoheptanedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(S)-4-hydroxy-2-oxopentanoate

2-oxopent-4-enoate

(2E)-2-hydroxypenta-2,4-dienoate

D-erythro-imidazole-glycerol-phosphate

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

4-deoxy-4-formamido-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

UDP-4-deoxy-4-formamido-β-L-arabinopyranose

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

2-maleylacetate

presqualene diphosphate

squalene

7-carboxy-7-deazaguanine

DNA without lesion

arsenite

4-maleyl-acetoacetate

2-oxoglutaramate

palmitaldehyde

urea-1-carboxylate

(enterobacterial common antigen)-undecaprenyl diphosphate

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

α-D-glucosamine 1-phosphate

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

4-prenylphlorisobutyrophenone

2-succinylbenzoate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

pyrazine-2-carboxylate

3-fumarylpyruvate

3-maleylpyruvate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

2'-N-acetylparomamine

2-deoxystreptamine

UDP-α-D-kanosamine

2'-deamino-2'-hydroxyneamine

6'-dehydroparomamine

paromamine

2'-deamino-2'-hydroxy-6'-dehydroparomamine

2'-deamino-2'-hydroxyparomamine

glutathione disulfide

2-dehydro-3-deoxy-D-gluconate 6-phosphate

3-oxopropanoate

(R)-4'-phosphopantothenoyl-L-cysteine

adipate

6-oxohexanoate

6-aminohexanoate cyclic dimer

propene

prephenate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

L-xylo-hex-3-ulono-1,4-lactone

2-dehydro-6-phospho-D-gluconate

glutathioselenol

selenodiglutathione

L-dehydro-ascorbate

5-oxo-L-proline

dehydroascorbate (bicyclic form)

3-keto-L-gulonate 6-phosphate

α-D-galacturonate 1-phosphate

aminoacetone

(2E,6E)-farnesyl diphosphate

pristanate

hypoglycin B

L-α-amino-ε-keto-pimelate

L-kynurenine

L-methionine

L-cysteine

glycine

L-alanine

L-proline

L-leucine

L-valine

L-tryptophan

L-phenylalanine

L-isoleucine

L-selenocysteine

L-isoglutamine

L-asparagine

L-glutamate

L-glutamine

L-aspartate

L-serine

L,L-diaminopimelate

L-threonine

L-lysine

L-aspartyl-4-phosphate

L-arginine

L-ornithine

L-tyrosine

L-2,4-diaminobutanoate

L-histidine

L-cystathionine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

L-2-acetamido-6-oxoheptanedioate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-aspartate

N-formimino-L-glutamate

N^α,N^α-dimethyl-L-histidine

N^α-methyl-L-histidine

L-citrulline

L-cystine

L-4-hydroxyglutamate semialdehyde

O-phospho-L-homoserine

L-homoserine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

hypoglycin A

L-glutamate-5-semialdehyde

L-canaline

L-homocysteine

L-aspartate 4-semialdehyde

S-sulfo-L-cysteine

O-succinyl-L-homoserine

D-allothreonine

L-allo-threonine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

2-hydroxy-5-oxoproline

L-2-amino-3-oxobutanoate

seleno-L-homocysteine

O-acetyl-L-homoserine

hercynine

cis-4-hydroxy-D-proline

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

N-carbamoylglycine

N-acetyl-L-glutamate

sarcosine

3-phospho-L-serine

D-glutamate

D-alanine

D-threonine

D-cysteine

β-alanine

(R)-3-amino-2-methylpropanoate

isoguanine

8-oxo-dGTP

8-oxo-GTP

AMP

ATP

GDP

ADP

GTP

dADP

dATP

dGDP

dGTP

2'-deoxyadenosine

2'-deoxyguanosine

hypoxanthine

2'-deoxyinosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

IDP

ITP

XMP

IMP

GMP

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

dAMP

dGMP

5'-deoxyadenosine

ppGpp

pppGpp

adenylo-succinate

dITP

dIDP

5,6-dihydrothymine

5,6-dihydrouracil

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-α-D-glucose

GDP-β-L-fucose

CDP-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

dTDP-β-L-rhamnose

dTDP-4-acetamido-4,6-dideoxy-α-D-galactose

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galactose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-β-L-threo-pentapyranos-4-ulose

UDP-4-amino-4-deoxy-β-L-arabinopyranose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

adenine

guanine

uracil

thymine

preQ₁

cyclic di-3',5'-guanylate

dCMP

dUMP

dTMP

dCDP

dUDP

dTDP

dCTP

dUTP

dTTP

UDP

CDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

2-hydroxy-dATP

5-hydroxy-CMP

5-hydroxy-CTP

NADP⁺

NAD⁺

NADPH

NADH

2'-deoxyuridine

2'-deoxycytidine

thymidine

adenosine

inosine

guanosine

xanthosine

uridine

cytidine

5'-deoxy-5'-fluoroadenosine

D-gluconate

D-altronate

D-mannonate

L-gulonate

D-galactonate

aldehydo-L-galactonate

1-(β-D ribofuranosyl)nicotinamide

2-deoxy-scyllo-inosamine

2-deoxy-L-scyllo-inosose

3-amino-2,3-dideoxy-scyllo-inosose

5-dehydro-4-deoxy-D-glucuronate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3'-ketolactose

neamine

kanamycin X

kanamycin C

kanamycin D

3''-deamino-3''-hydroxykanamycin B

kanamycin A

2'-dehydrokanamycin A

kanamycin B

lotaustralin

taxiphyllin

linamarin

linustatin

neolinustatin

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

α-D-galactose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

L-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

mannosylfructose-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

β-D-fructofuranose

1,5-anhydro-D-mannitol

keto-D-fructose

keto-D-sorbose

keto-L-sorbose

keto-D-tagatose

glycolaldehyde

α-D-xylopyranose

aldehydo-D-ribose

β-D-ribopyranose

β-D-ribofuranose

α-D-ribofuranose

β-D-galactopyranose

α-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

D-xylulose

2-dehydro-D-glucopyranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

glycerol

D-sorbitol

L-iditol

xylitol

XXXG xyloglucan oligosaccharide

agarotriose

agarohexaose

neoagarotriose

β-D-cellobiose

maltotriose

galactosyl-glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

isoprimeverose

melibiose

sucrose

α-lactose

α,α-trehalose

maltotetraose

maltopentaose

maltohexaose

maltoheptaose

stachyose

raffinose

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

aldehydo-D-galacturonate

phlorisovalerophenone

salicylaldehyde

4-methylumbelliferone

coumarin

scopoletin

phytyl diphosphate

all-trans-retinol

all-trans-retinyl palmitate

all-trans-4,4'-diapophytofluene

all-trans-4,4'-diapo-ζ-carotene

all-trans-4,4'-diaponeurosporene

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(3S)-linalool

(3R)-linalool

geranyl diphosphate

4,4'-diapolycopenedioate glycosyl diester

crocetin dialdehyde

all-trans-4,4'-diapolycopene

4,4'-diapolycopen-4,4'-dial

crocetin

(7R)-7 aminocephalosporanate

penicillin N

isopenicillin N

ecgonine methyl ester

cocaine

deoxycohumulone

4-prenylphlorisovalerophenone

deoxyhumulone

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-undecaprenyl diphosphate

all-trans-dodecaprenyl diphosphate

all-trans-tridecaprenyl diphosphate

geranylgeranyl diphosphate

3-octaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

dioleoyl phosphatidate

1-oleoyl-2-lyso-glycerone phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

1,2-dibutyrin

tributyrin

myo-inositol

scyllo-inositol

1D-chiro-inositol

scyllo-inosose

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1-keto-D-chiro-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

protocatechuate

3,4-dihydroxymandelate

3,4-dihydroxyphenylacetate

biphenyl-2,3-diol

1-octanol

ethanol

propan-1-ol

phytol

butan-1-ol

methanol

(2E,6E)-farnesal

fluoroacetaldehyde

methylglyoxal

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

phytenal

(S)-lactaldehyde

acetaldehyde

1-propanal

isobutanal

formaldehyde

1-octanal

butan-1-al

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

diacetyl

L-malic semialdehyde

3-oxo-dodecanoate

3-oxooctanoate

pyruvate

2-oxoglutarate

glyoxylate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

4-aminobenzoate

benzoate

acetate

5-deoxy-D-glucuronate

allantoate

orotate

fluoroacetate

(R)-pantoate

D-tagaturonate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

octanoate

decanoate

palmitate

butanoate

stearate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

oleate

linoleate

(3E,5Z)-tetradecadienoate

γ-linolenate

di-homo-γ-linolenate

(15Z)-tetracosenoate

phytenate

(2E,6E)-farnesoate

leukotriene-D4

leukotriene-E4

3-oxoadipate

3-oxohexanoate

formate

propanoate

(R)-lactate

(S)-lactate

(R)-glycerate

(R)-3-hydroxybutanoate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

chorismate

4,4'-diapolycopenedioate

D-galactarate

D-glucarate

succinate

fumarate

(S)-malate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-tyrosol

(2E,4E)-6-(2-aminophenyl)-2-hydroxy-6-oxohexa-2,4-dienoate

2'-aminobiphenyl-2,3-diol

4-hydroxybenzoate

urate

coumarinate

ferulate

quercetin

4-methylphenol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-heptaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-nonaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-heptaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-nonaprenyl-1,4-benzoquinol

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-9

demethylmenaquinol-8

demethylmenaquinol-7

demethylmenaquinol-9

demethylmenaquinol-6

demethylmenaquinol-10

demethylmenaquinol-11

demethylmenaquinol-12

demethylmenaquinol-13

menaquinol-8

menaquinol-7

menaquinol-9

menaquinol-6

menaquinol-10

menaquinol-11

menaquinol-12

menaquinol-13

ubiquinol-8

ubiquinol-7

ubiquinol-9

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

hydrogen cyanide

preQ₀

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

7,8-dihydrolumazine

6-carboxy-5,6,7,8-tetrahydropterin

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

molybdopterin

cyclic pyranopterin phosphate

molybdopterin adenine dinucleotide

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropterin

7,8-dihydroneopterin 3'-phosphate

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

FAD

riboflavin

FMN

FADH₂

FMNH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

aminomethylpyrimidine

formylaminopyrimidine

9H carbazole

hydantoin

cob(I)alamin

adenosylcobalamin

sirohydrochlorin

precorrin-1

precorrin-2

thiamine

nicotinate

nicotinamide

L-ascorbate

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal

pyridoxine

pyridoxamine

coenzyme A

coenzyme M

(R)-NADHX

(S)-NADHX

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

L-galactono-1,4-lactone

HAI-1

PAI-1

PAI-1-2

VAI-1

VAI-1-2

AAI-1

L-homoserine lactone

acetyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

(E)-glutaconyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

succinyl-CoA

oxalyl-CoA

formyl-CoA

3'-dephospho-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

CoA-disulfide

malonyl-CoA

(2S)-methylsuccinyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

2-methylacetoacetyl-CoA

(+)-7-epi-jasmonoyl-CoA

dihomo γ-linolenoyl-CoA

phenylacetyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

hexadecanedioyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

octanoyl-CoA

decanoyl-CoA

butanoyl-CoA

propanoyl-CoA

cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

2-carboxy-cerotoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

estrone

ethene

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

phenylacetate

(+)-7-epi-jasmonate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3-β-hydroxyandrost-5-en-17-one

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

pyrazinamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(R)-piperidine-3-carboxamide

(R)-piperazine-2-tert-butylcarboxamide

(R)-piperazine-2-carboxamide

(S)-(+)-allantoin

6-caprolactam

2-chloroacetate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

choline

betaine aldehyde

betaine aldehyde hydrate

agmatine

putrescine

spermidine

4-aminobutanal

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

thiosulfate

OH^-

hydrogensulfite

hydrogencarbonate

molybdate

superoxide

phosphate

diphosphate

triphosphate

chloride

fluoride

Fe³⁺

Na⁺

H⁺

ammonium

Mg²⁺

Fe²⁺

Ni²⁺

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

(2R)-phospho-3-sulfolactate

3-sulfopyruvate

L-cysteate

(2R)-3-sulfolactate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

thiocyanate

methanethiol

S-sulfanylglutathione

nitric oxide

hydroxyl radical

monodehydroascorbate radical

(R)-1,2-epoxypropane

(S)-1,2-epoxypropane

2-methoxy-6-(all-trans-nonaprenyl)phenol

6-(all-trans-decaprenyl)-2-methoxy-phenol

2-methoxy-6-(all-trans-heptaprenyl)phenol

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

2-heptaprenylphenol

2-nonaprenylphenol

3-(all-trans-nonaprenyl)benzene-1,2-diol

3-(all-trans-decaprenyl)benzene-1,2-diol

3-(all-trans-heptaprenyl)benzene-1,2-diol

3-(all-trans-octaprenyl)benzene-1,2-diol

5,10-methenyltetrahydrofolate mono-L-glutamate

dTDP-4-amino-4,6-dideoxy-α-D-galactose

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2-O-(α-D-glucopyranosyl)-3-phospho-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-3-phospho-D-glycerate

2-O-(α-D-glucopyranosyl)-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

sn-glycerol 1-phosphate

S⁰

oxygen

hydrogen sulfide

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

protoporphyrin IX

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

Mg-protoporphyrin

magnesium-protoporphyrin IX 13-monomethyl ester

hemin

siroheme

protoheme

nitrous oxide

N₂

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosylcobalamin 5'-phosphate

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

ethylphosphate

DNA with lesion

2-(R)-hydroxypropyl-CoM

(2S)-2-hydroxypropyl-CoM

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

L-cysteinylglycine

L-alanyl-L-glutamate

L-alanyl-D-glutamate

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

2-iminobutanoate

2-iminosuccinate

(S)-nipecotate