an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-carboxy-L-threo-pentonate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic- 3,4-O-oxalyl-L-threonate

5-hydroxyindole thiazolidine carboxylate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

4-oxoglutaramate

1-piperideine 6-carboxylate

bisorganyltrisulfane

2-carboxy-L-xylonolactone

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

cyclic-2,3-O-oxalyl-L-threonate

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

α-D-galacturonate 1-phosphate

(2Z)-2-(acetamidomethylene)succinate

3-hydroxy-2-methylpyridine-5-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

7-epicholate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

pimelate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

selenodiglutathione

glutathioselenol

1-(methylsulfanyl)xylulose 5-phosphate

4-maleyl-acetoacetate

homogentisate

5-dehydro-4-deoxy-D-glucarate

2-dehydro-6-phospho-D-gluconate

3'-ketosucrose

pyruvic oxime

5-dehydro-2-deoxy-D-gluconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

oxamate

4-oxo-4-(pyridin-3-yl)butanal

4-oxo-4-(3-pyridyl)-butanoate

pseudooxynicotine

maleamate

N-formylmaleamate

2,5-dihydroxypyridine

N-methylmyosmine

6-hydroxy-3-succinoyl-pyridine

5-oxo-L-proline

γ-butyrobetaine

2-iminoacetate

methylamine

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

N⁵-carboxyaminoimidazole ribonucleotide

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine 4-sulfate

2,3-dioxo-L-gulonate

L-dehydro-ascorbate

dehydroascorbate (bicyclic form)

4-amino-2-methyl-5-pyrimidinemethanol

octadecanal

carbon monoxide

(R)-4'-phosphopantothenoyl-L-cysteine

M_LPS

core oligosaccharide-lipid A (E. coli K-12 core type)

ADP-D-glycero-β-D-manno-heptose

ADP-L-glycero-β-D-manno-heptose

aminoacetone

1,4-dihydroxy-2-naphthoate

4-aminobutanoate

N-acetylglutamyl-phosphate

L-arginino-succinate

canavaninosuccinate

hydrogen selenide

O-acetyl-L-serine

phthalate

2,2'-disulfonyl azobenzene

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

formamide

(R)-pantothenate

(R)-4'-phosphopantothenate

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

3-deoxy-D-glycero-2,5-hexodiulosonate

oxalate

γ-L-glutamyl 5-phosphate

S-ribosyl-L-homocysteine

autoinducer 2

prephenate

O-ureido-L-homoserine

α-D-glucosamine 1-phosphate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

preuroporphyrinogen

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

dihydroxyacetone

4-deoxy-4-formamido-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

UDP-4-deoxy-4-formamido-β-L-arabinopyranose

(lipoyl)adenylate

(S)-4-amino-5-oxopentanoate

N-acetyl-L-glutamate 5-semialdehyde

2-(α-hydroxyethyl)thiamine diphosphate

(E)-2-benzylidenesuccinyl-CoA

2,3-didehydroadipyl-CoA

(E)-4-coumaroyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

benzoylsuccinyl-CoA

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

2-phosphoglycolate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4S)-4-hydroxy-2-oxoheptanedioate

(4-hydroxyphenyl)acetate

L-canavanine

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

2-dehydropantoate

thiamine diphosphate

5-amino-6-(D-ribitylamino)uracil

4'-phosphopantetheine

L-tartrate

meso-tartrate

2-hydroxy-3-oxosuccinate

succinate semialdehyde

acrylamide

acrylate

propionamide

4-guanidinobutanoate

(indol-3-yl)acetamide

(S)-ureidoglycolate

N-carbamoyl-2-oxoglycine

(5S)-5-benzyl-hydantoin

(5R)-5-benzyl-hydantoin

β-D-galactosyl-(1→4)-N-acetyl-D-glucosamine

S-formylglutathione

2-methyl-trans-aconitate

dihydrolipoamide

lipoamide

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

(2S)-2-isopropylmalate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

4-guanidinobutyramide

3-oxopropanoate

diethylphosphate

dimethylthiophosphate

diethylthiophosphate

L-selenocystathionine

5-methylcytosine

trimethylamine N-oxide

trimethylamine

ammonia

hydroxylamine

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

3''-adenylylstreptomycin

(indol-3-yl)pyruvate

2-keto-D-gluconate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

3'-phosphoadenylyl-sulfate

tartronate semialdehyde

nitrilotriacetate

iminodiacetate

3-maleylpyruvate

2-amino-5-oxocyclohex-1-enecarboxyl-CoA

xanthine

shikimate

2-oleoylglycerol

thiamine phosphate

1,6-anhydro-N-acetyl-β-muramate

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

oxalosuccinate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

N-succinyl-L,L-2,6-diaminopimelate

prenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

glutathione disulfide

pyrazine-2-carboxylate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

4-amino-4-deoxychorismate

N-(5-phosphoribosyl)-anthranilate

anthranilate

(L-threonylcarbamoyl)adenylate

5-aminolevulinate

porphobilinogen

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

orotidine 5'-phosphate

selenophosphate

methylsalicylate

4-fumaryl-acetoacetate

acetoacetate

4-acetamidobutanal

4-acetamidobutanoate

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

coproporphyrinogen III

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

adenosine 3',5'-bisphosphate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

(R)-3-(phenyl)lactoyl-CoA

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

(S)-dihydroorotate

lipid IV_A

shikimate 3-phosphate

3-phosphooxypyruvate

histidinal

L-histidinol phosphate

histidinol

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

chloramphenicol

N-acetyl-D-muramate 6-phosphate

3-methyl-2-oxobutanoate

3-mercaptopyruvate

DNA without lesion

pimeloyl-CoA

dethiobiotin

(S)-2-amino-6-oxohexanoate

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

2-O-(6-phospho-α-D-mannosyl)-D-glycerate

3-deoxy-D-arabino-heptulosonate 7-phosphate

quinolinate

itaconate

citrate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

nicotinate adenine dinucleotide

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

5-enolpyruvoyl-shikimate 3-phosphate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

5-phospho-β-D-ribosylamine

acetyl phosphate

D-glycero-β-D-manno-heptose 1-phosphate

lipid X

lipid A disaccharide (E. coli)

isopentenyl diphosphate

2-C-methyl-D-erythritol 4-phosphate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

4-phosphooxy-L-threonine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

glutathionylspermidine

1-deoxy-L-glycero-tetrulose 4-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

estrone 3-sulfate

urea

H₂

carbamoyl phosphate

salicyl alcohol

2-hydroxy-5-carboxymethylmuconate semialdehyde

5-carboxymethyl-2-hydroxymuconate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

phosphoenolpyruvate

3-deoxy-D-manno-octulosonate 8-phosphate

3-deoxy-α-D-manno-2-octulosonate

3-dehydroquinate

3-dehydroshikimate

N-Formyl-L-kynurenine

4-imidazolone-5-propanoate

urocanate

ethanolamine

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

indole-3-glycol

indole-3-glycol aldehyde

2-methylbutanol

2-methylbutanal

isobutanol

3-methoxy-4-hydroxyphenylglycolaldehyde

3-methylbutanol

3-methylbutanal

2-phenylethanol

chloroacetaldehyde

(S)-mandelate

(R)-mandelate

3-keto-L-gulonate

3-keto-L-gulonate 6-phosphate

2-dehydro-3-deoxy-D-gluconate

glycolate

hydroxypyruvate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-galactonate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

4-hydroxy-2-nonenal

4-pyridoxolactone

glycerone phosphate

β-nicotinate D-ribonucleotide

β-D-ribosylnicotinate

oxaloacetate

enol-phenylpyruvate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

1,4-dihydroxy-2-naphthoyl-CoA

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

hydrogen peroxide

urea-1-carboxylate

CO₂

dimethyl sulfoxide

isochorismate

H₂O

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

phenylacetate

ethylphosphate

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

cob(I)alamin

adenosylcobalamin

hemin

protoheme

N₂

nitrous oxide

hydrogen cyanide

uroporphyrinogen-I

coproporphyrinogen I

uroporphyrinogen-III

protoporphyrin IX

protoporphyrinogen IX

siroheme

hydrogen sulfide

oxygen

S⁰

2-chloroacetate

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

(R)-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

Reactive Blue 5

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

N-acetyl-D-mannosamine 6-phosphate

(S)-ureidoglycine

1-oleoyl-2-lyso-glycerone phosphate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

hydroxyl radical

monodehydroascorbate radical

nitric oxide

superoxide

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

acrylonitrile

preQ₀

(indole-3-yl)acetonitrile

molybdopterin

(R)-lipoate

coenzyme A

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

glycine betaine

FAD

FADH₂

FMNH₂

FMN

(R)-NADHX

(S)-NADHX

demethylmenaquinol-11

demethylmenaquinol-9

demethylmenaquinol-8

demethylmenaquinol-10

demethylmenaquinol-6

demethylmenaquinol-7

demethylmenaquinol-12

demethylmenaquinol-13

ubiquinol-9

menaquinol-11

menaquinol-9

menaquinol-8

menaquinol-10

menaquinol-6

menaquinol-7

menaquinol-12

menaquinol-13

3-demethylubiquinol-8

3-demethylubiquinol-9

NADP⁺

NAD⁺

NADPH

NADH

L-ascorbate

riboflavin

thiamine

nicotinamide

nicotinate

L-carnitine

4-pyridoxate

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxal

all-trans-retinol

Fe³⁺

ammonium

K⁺

Na⁺

H⁺

Mn²⁺

Cu²⁺

Zn²⁺

Ni²⁺

Co²⁺

Fe²⁺

trimethyl sulfonium

sulfate

hydrogensulfite

OH^-

selenite

molybdate

selenide

selenate

tetrathionate

thiosulfate

nitrite

nitrate

sulfite

hydrogencarbonate

phosphate

triphosphate

diphosphate

chloride

S-(hydroxymethyl)glutathione

methionol

3-(methylsulfanyl)propanal

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

N-acetyl-D-galactosamine 6-O-sulfate

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

taurine

L-cysteate

3-sulfopyruvate

methanethiol

thiocyanate

S-sulfanylglutathione

ferrichrome

(2Z)-2-aminobut-2-enoate

2-iminopropanoate

2-aminoprop-2-enoate

agmatine

N¹-acetylspermidine

N¹-acetylspermine

N-acetylputrescine

spermine

putrescine

cadaverine

spermidine

choline

betaine aldehyde

sn-glycero-3-phosphocholine

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

1-oleoyl-2-palmitoyl-phosphatidylglycerol

glycerol

D-ribitol

D-arabinitol

D-mannitol 1-phosphate

galactitol

D-mannitol

L-iditol

D-sorbitol

butan-1-ol

propan-1-ol

ethanol

methanol

phytol

1D-chiro-inositol

scyllo-inositol

myo-inositol

1-keto-D-chiro-inositol

scyllo-inosose

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

hydroquinone

2,3-dihydroxybenzoate

protocatechuate

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

enterobactin

ethylene glycol

(S)-propane-1,2-diol

(R)-propane-1,2-diol

ethene

heptadecane

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

3-dehydrocholate

isocholate

glycocholate

cholate

estrone

3-β-hydroxyandrost-5-en-17-one

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

(+)-7-epi-jasmonate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

fluoroacetaldehyde

fluoroacetate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

allantoate

acetamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

pyrazinamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

(S)-(+)-allantoin

N-acetyl-β-neuraminate

chorismate

(4S)-4-hydroxy-2-oxoglutarate

D-glucarate

D-galactarate

maleate

succinate

fumarate

L-aspartate

(S)-malate

gentisate

(2R,3S)-2-methylisocitrate

(S)-lactate

(R)-lactate

13-sophorosyloxydocosanoate 6',6''-diacetate

13-[O(2')-β-D-glucopyranosyl-β-D-glucopyranosyloxy]docosanoate O(6'')-acetate

sophorosyloxydocosanoate

formate

propanoate

acetate

pyruvate

butanoate

octanoate

3-oxoadipate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

4-(methylsulfanyl)-2-oxobutanoate

2-oxobutanoate

glyoxylate

2-oxoglutarate

(R)-4-hydroxy-4-methyl-2-oxoglutarate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

salicylate

trans-cinnamate

benzoate

4-aminobenzoate

stearate

palmitate

phytenate

oleate

(3E,5Z)-tetradecadienoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

di-homo-γ-linolenate

apo-4'-lycopenoate

5-deoxy-D-glucuronate

(R)-pantoate

D-gluconate

orotate

D-mannonate

(S)-1-pyrroline-5-carboxylate

D-tagaturonate

aldehydo-D-galacturonate

aldehydo-D-glucuronate

L-α-amino-ε-keto-pimelate

L-threo-3-phenylserine

L-serine

D-serine

β-alanine

(S)-3-amino-2-methylpropanoate

L-glutamate

D-glutamate

L-arginine

L-histidine

L-lysine

L-proline

L-leucine

L-alanine

glycine

L-glutamine

L-cysteine

L-tyrosine

L-threonine

L-asparagine

L-tryptophan

L-phenylalanine

D-aspartate

D-methionine

D-cysteine

D-alanine

L-2-amino-3-oxobutanoate

seleno-L-homocysteine

L-selenomethionine

L-aspartyl-4-phosphate

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-glutamate

N-acetyl-L-methionine

O-acetyl-L-homoserine

3-phospho-L-serine

L-methionine

L-selenocysteine

L-valine

L-isoleucine

L-isoglutamine

L-cystathionine

L,L-diaminopimelate

L-ornithine

L-citrulline

L-4-hydroxyglutamate semialdehyde

S-sulfo-L-cysteine

L-canaline

hypoglycin A

O-phospho-L-homoserine

L-homoserine

O-succinyl-L-homoserine

L-homocysteine

L-glutamate-5-semialdehyde

L-aspartate 4-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

meso-diaminopimelate

L-allo-threonine

3-carboxy-cis,cis-muconate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

cis-aconitate

D-threo-isocitrate

diacetyl

methylglyoxal

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

salicylaldehyde

glycolaldehyde

phytenal

butan-1-al

1-octanal

1-propanal

isobutanal

acetaldehyde

formaldehyde

(S)-lactaldehyde

(R)-lactaldehyde

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

L-glyceraldehyde

D-glyceraldehyde

aldehydo-D-mannose

β-D-mannopyranose

β-D-galactopyranose

α-D-galactopyranose

α-D-glucopyranose

β-D-glucopyranose

α-L-rhamnopyranose

β-L-rhamnopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

a coenzyme-A group

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

3-dehydro-D-glucopyranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

CMP-3-deoxy-β-D-manno-octulosonate

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

GDP-α-D-mannose

ADP-D-ribose

UDP-α-D-galacturonate

UDP-α-D-galactofuranose

UDP-α-D-glucuronate

UDP-β-L-iduronate

UDP-N-acetyl-α-D-mannosamine

UDP-β-L-threo-pentapyranos-4-ulose

UDP-4-amino-4-deoxy-β-L-arabinopyranose

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-glucose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

sucrose 6^G-phosphate

sucrose 6^F-phosphate

β-D-cellobiose 6'-phosphate

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

methyl β-D-glucoside 6-phosphate

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

salicin 6-phosphate

arbutin-6-phosphate

streptomycin

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

4-phospho-D-erythronate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-tagatofuranose 1,6-bisphosphate

β-D-fructose 1,6-bisphosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

L-xylulose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-fructose 6-phosphate

D-tagatofuranose 6-phosphate

L-ascorbate 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-galactose 1-phosphate

L-fuculose 1-phosphate

L-rhamnulose 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-fructofuranose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-mannosamine

N-acetyl-β-D-galactosamine

N-acetyl-β-D-glucosamine

keto-L-sorbose

keto-D-fructose

L-xylulose

D-ribulose

D-xylulose

unsaturated gellan tetrasaccharide

β-D-Glcp-(1→4)-α-L-Rhap-(1→3)-D-Glcp

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl--D-galactosamine 6-sulfate

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine

sucrose

galactosyl-glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

4'-α-L-Ara4N-α-Kdo-(2→4)-α-Kdo-(2→6)-[P4'-α-L-ara4N]-lipid A

glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₂-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₂-Kdo₂-lipid A

galactosyl-(glucosyl)₂-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₃-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

heptosyl-Kdo₂-lipid IV_A

heptosyl-Kdo₂-lipid A

(heptosyl)₂-Kdo₂-lipid A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

colanic acid

L-gulonate

aldehydo-L-galactonate

D-altronate

2-methylbutanoyl-CoA

isobutanoyl-CoA

oxalyl-CoA

formyl-CoA

methylacrylyl-CoA

(2E,5Z)-tetradecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

phenylacetyl-CoA

dihomo γ-linolenoyl-CoA

L-carnitinyl-CoA

γ-butyrobetainyl-CoA

crotonobetainyl-CoA

anthraniloyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3'-dephospho-CoA

itaconyl-CoA

4-hydroxybenzoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

succinyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

linoleoyl-CoA

γ-linolenoyl-CoA

2-methylacetoacetyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

acetyl-CoA

malonyl-CoA

crotonyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(S)-malyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

butanoyl-CoA

propanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

lauroyl-CoA

octanoyl-CoA

decanoyl-CoA

hexanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

(E)-cinnamoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

all-trans-retinyl palmitate

D-glucono-1,5-lactone

L-galactono-1,4-lactone

tributyrin

1,2-dibutyrin

(S)-nicotine

apo-4'-lycopenal

geranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

(+)-copalyl diphosphate

neoabietadiene

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

1,2-dipalmitoyl-sn-glycero-3-phosphocholine

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

1-18:1-2-18:1-phosphatidylethanolamine

dioleoyl phosphatidate

1-oleoyl-sn-glycerol 3-phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-palmitoyl-sn-glycero-3-phosphocholine

3-nonaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl phosphate

urate

toluene

4-hydroxybenzoate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

4-tyrosol

parathion

methyl parathion

amino-parathion

3-methoxy-4-hydroxyphenylglycol

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

4-nitrophenol

4-aminophenol

4-methylphenol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

paraoxon

chloramphenicol 3-acetate

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

7,8-dihydrolumazine

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

7,8-dihydroneopterin 3'-phosphate

molybdopterin adenine dinucleotide

cyclic pyranopterin phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropteroate

guanine

adenine

2'-deoxyguanosine

2'-deoxyadenosine

2'-deoxyinosine

xanthosine

guanosine

inosine

adenosine

hypoxanthine

dGMP

dIMP

dAMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

XTP

ITP

GTP

ATP

IDP

GDP

ADP

AMP

XMP

GMP

IMP

dTTP

uridine 2'3'-cyclic monophosphate

uridine 3'-monophosphate

cytidine 2',3'-cyclic monophosphate

cytidine-3'-monophosphate

dTDP

uracil

cytosine

dCMP

dCTP

dUTP

CTP

UTP

dUMP

dTMP

dUDP

UDP

dCDP

CDP

cytidine

uridine

thymidine

2'-deoxycytidine

2'-deoxyuridine

5-fluorouracil

thymine

CMP

UMP

preQ₁

isoguanine

N3-methylcytosine

N¹-methyladenine

N¹-ethyladenine

sirohydrochlorin

precorrin-2

precorrin-1

8-oxo-GTP

8-oxo-GMP

pppGpp

ppGpp

adenosine 2',3'-cyclic monophosphate

adenosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

guanosine 3'-monophosphate

adenylo-succinate

8-oxo-dGTP

8-oxo-dGMP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

cyclic-AMP

5'-deoxyadenosine

5-fluorocytosine

5-hydroxy-CTP

2-hydroxy-dATP

reduced β-nicotinamide D-ribonucleotide

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

hypoglycin B

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

(R)-3-(phenyl)lactate

2-iminobutanoate

2-iminosuccinate

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine