an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

maleamate

maleimide

glutathionylspermidine

2-C-methyl-D-erythritol 4-phosphate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

shikimate 3-phosphate

shikimate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

L-canavanine

3-demethylubiquinol-6

4-imidazoleacetate

imidazole acetaldehyde

5-hydroxyindole acetate

1-phosphatidyl-myo-inositol 2-mannose

1-phosphatidyl-myo-inositol

3,4-dihydroxyphenylacetaldehyde

propynoate

prop-2-ynal

D-glucurono-6,3-lactone

4-acetamidobutanoate

4-acetamidobutanal

dimethylsulfoniopropanoate

3-keto-β-D-galactose

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

4-methylumbelliferyl glucoside

4-hydroxybenzaldehyde

scopolin

cis-coumarinic acid-β-D-glucoside

2-dehydro-3-deoxy-D-gluconate 6-phosphate

O-acetyl-L-serine

iminodiacetate

nitrilotriacetate

carbamoyl phosphate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

β-D-ribosylnicotinate

sym-homospermidine

4-amino-4-deoxychorismate

phosphoenolpyruvate

nicotine-1'-N-oxide

N,N-dimethylaniline-N-oxide

N,N-dimethylaniline

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

D-gluconate 6-phosphate

α-D-glucosamine 1-phosphate

3-phosphooxypyruvate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

acetyl phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

pseudouridine 5'-phosphate

2-dehydro-3-deoxy-D-galactonate

diethylphosphate

dimethylthiophosphate

diethylthiophosphate

methylamine

ethylamine

N-ethylglycine

2-iminoacetate

core oligosaccharide-lipid A (E. coli K-12 core type)

M_LPS

(S)-5-hydroxyisourate

coproporphyrinogen III

streptomycin 3''-phosphate

aminoacetone

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

6-aminohexanoate

6-aminohexanoate linear dimer

2-dehydro-6-phospho-D-gluconate

γ-butyrobetaine

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

prenyl diphosphate

acrylamide

propionamide

oxalosuccinate

butyramide

(indol-3-yl)acetamide

5-amino-6-(D-ribitylamino)uracil

2-oxopent-4-enoate

4-hydroxy-2-nonenal

(R)-1-amino-2-propanol O-2-phosphate

dialurate

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

2-amino-2-deoxy-D-gluconate 6-phosphate

8-amino-7-oxononanoate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

3-hydroxy-2-methylpyridine-5-carboxylate

(2Z)-2-(acetamidomethylene)succinate

chloroacetaldehyde

dihydroxyacetone

3'-ketosucrose

N-acetyl-D-muramate 6-phosphate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxymuconate

3-dehydroshikimate

5-dehydro-D-gluconate

hydrogenobyrinate a,c-diamide

3-hydroxypropanoate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

protoanemonin

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

tartronate semialdehyde

4-fumaryl-acetoacetate

4-maleyl-acetoacetate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

glycolate

2-phosphoglycolate

glutathione disulfide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

octopamine

(4-hydroxyphenyl)acetate

(R)-synephrine

isoquinolin-2(1H)-one

isoquinoline

anthranilate

N-(5-phosphoribosyl)-anthranilate

proclavaminate

amidinoproclavaminate

4'-phosphopantetheine

(1R,2R)-cyclohexa-3,5-diene-1,2-diol

2-(α-hydroxyethyl)thiamine diphosphate

3-deoxy-D-manno-octulosonate 8-phosphate

lipid A disaccharide (E. coli)

lipid X

L-selenocystathionine

hydrogen selenide

3-mercaptopyruvate

homogentisate

(2-hydroxyphenyl)acetate

(S)-dihydroorotate

H₂O

CO₂

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

mercuriphenyl acetate

(2R,3S)-3-isopropylmalate

succinate semialdehyde

salicyl alcohol

4-amino-2-methyl-5-pyrimidinemethanol

methylsalicylate

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

2-amino-3-carboxymuconate-6-semialdehyde

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

3-methoxy-4-hydroxyphenylglycolaldehyde

N¹-(5-phospho-β-D-ribosyl)glycinamide

indole-3-glycol aldehyde

indole-3-glycol

isobutanol

3-methylbutanal

3-methylbutanol

2-methylbutanal

2-methylbutanol

2-phenylethanol

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

hydrogen peroxide

3-oxopropanoate

oxaloacetate

2-dehydropantoate

3-methyl-2-oxobutanoate

(R)-pantothenate

5-methylcytosine

xanthine

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

2,5-dioxopentanoate

5-dehydro-4-deoxy-D-glucarate

2-maleylacetate

glycerone phosphate

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

5-phospho-α-D-ribose 1,2-cyclic phosphate

α-D-ribose-1-methylphosphonate 5-phosphate

3-ureidopropanoate

2-methyl-4-chlorophenol

2-arylpropanoate

2-aryl-2-methylmalonate

5-phospho-β-D-ribosylamine

ethanolamine

N^β-acetylstreptothricin F

urea-1-carboxylate

urea

6-amino-2-oxohexanoate

acetoacetate

(E)-3-(methoxycarbonyl)pent-2-enedioate

6-phospho D-glucono-1,5-lactone

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-phosphooxy-L-threonine

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

2-dehydro-3-deoxy-D-gluconate

5-aminolevulinate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

carbonic acid

2-isopropylmaleate

(2S)-2-isopropylmalate

coniferaldehyde

4-methylbenzyl alcohol

3-methylbenzaldehyde

5-enolpyruvoyl-shikimate 3-phosphate

3-methylbenzyl alcohol

nicotinate adenine dinucleotide

β-nicotinate D-ribonucleotide

2-hydroxy-3-oxosuccinate

L-tartrate

γ-L-glutamyl 5-phosphate

meso-tartrate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

L-histidinol phosphate

imidazole acetol-phosphate

isopentenyl diphosphate

thiamine diphosphate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

lipid IV_A

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

L-β-lysine

2,5-didehydro-D-gluconate

2-keto-D-gluconate

prephenate

4-pyridoxolactone

acrylate

citrate

histidinol

histidinal

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

arsenite

autoinducer 2

preuroporphyrinogen

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

porphobilinogen

creatinine

(S)-4-amino-5-oxopentanoate

(R)-mandelate

urocanate

(S)-mandelate

pimeloyl-CoA

pimelate

orotidine 5'-phosphate

2-keto-L-gulonate

(S)-2,3,4,5-tetrahydrodipicolinate

1-deoxy-L-glycero-tetrulose 4-phosphate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

4-imidazolone-5-propanoate

glutathioselenol

selenodiglutathione

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

S-ribosyl-L-homocysteine

4-guanidinobutanoate

4-guanidinobutyramide

3-deoxy-α-D-manno-2-octulosonate

4-aminobutanoate

D-erythro-imidazole-glycerol-phosphate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

biuret

formamide

H₂

3-hydroxypropanal

1,3-propanediol

carbon monoxide

quinolinate

2-chloroethanol

1,2-dichloroethane

(1S,4R)-2,4,5-trichloro-2,5-cyclohexadiene-1-diol

(3R,6R)-1,3,4,6-tetrachlorocyclohexa-1,4-diene

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

3-deoxy-D-glycero-2,5-hexodiulosonate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

N⁵-carboxyaminoimidazole ribonucleotide

4-methyl-3-oxoadipate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

adipate

6-oxohexanoate

6-aminohexanoate cyclic dimer

hydroxypyruvate

(S)-ureidoglycolate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

pseudouridine

(3S,5S)-3,5-diaminohexanoate

(S)-5-amino-3-oxohexanoate

(5R)-5-benzyl-hydantoin

(5S)-5-benzyl-hydantoin

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

pyrazine-2-carboxylate

ectoine

(2S)-4-acetamido-2-aminobutanoate

tryptamine

5-methoxyindoleacetaldehyde

5-methoxytryptamine

propane-1,3-diamine

DNA without lesion

hydrogenobyrinate

α-ribazole

5-oxo-L-proline

3'-phosphoadenylyl-sulfate

estrone 3-sulfate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

5-methylsalicylate

4-methylsalicylate

prephytoene diphosphate

propanoyl phosphate

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

malonate

(L-threonylcarbamoyl)adenylate

1,5-anhydro-D-fructose

octadecanal

L-gulono-1,4-lactone

L-xylo-hex-3-ulono-1,4-lactone

α-D-galacturonate 1-phosphate

L-dehydro-ascorbate

5-aminopentanoate

1-piperideine-2-carboxylate

4-oxoglutaramate

(2E)-2-hydroxypenta-2,4-dienoate

(3E)-2-oxopent-3-enoate

1-pyrroline

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

4-oxalocrotonate

ammonia

bisorganyltrisulfane

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

(2E,6E)-farnesyl diphosphate

pristanate

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

hypoglycin B

L-α-amino-ε-keto-pimelate

L-isoleucine

L-valine

L-selenocysteine

L-methionine

L-proline

L-alanine

L-phenylalanine

glycine

L-leucine

L-tryptophan

L-cysteine

L-arginine

L-asparagine

L-cystathionine

L-ornithine

L-glutamate

L-aspartate

L-threonine

L-serine

L-aspartyl-4-phosphate

L-lysine

L,L-diaminopimelate

L-glutamine

L-tyrosine

L-histidine

L-2,4-diaminobutanoate

L-isoglutamine

N-carbamoyl-L-aspartate

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

L-citrulline

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-homocysteine

S-sulfo-L-cysteine

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

L-glutamate-5-semialdehyde

O-succinyl-L-homoserine

L-homoserine

hypoglycin A

1-aminocyclopropane-1-carboxylate

L-canaline

L-4-hydroxyglutamate semialdehyde

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-2-amino-3-oxobutanoate

seleno-L-homocysteine

3-phospho-L-serine

O-acetyl-L-homoserine

cis-4-hydroxy-D-proline

trans-4-hydroxy-L-proline

N-carbamoylglycine

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

S-methyl-L-methionine

D-alanine

D-glutamate

D-aspartate

D-lysine

D-proline

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

hippurate

4-methylphenol

2-iminopropanoate

4-[(2Z)-2-(methylimino)ethyl]phenol

4-(2-iminoethyl)phenol

2-iminobutanoate

2-iminosuccinate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

dADP

GDP

dGDP

cyclic-AMP

GTP

dATP

dGTP

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-AMP

dAMP

dGMP

ITP

2'-deoxyguanosine

guanosine 3'-monophosphate

adenosine 3'-monophosphate

AMP

ATP

ADP

IDP

dITP

hypoxanthine

dIDP

IMP

1-(5-phospho-β-D-ribosyl)-ATP

GMP

XMP

2'-deoxyinosine

2'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5'-deoxyadenosine

cyclic-GMP

ppGpp

pppGpp

isoguanine

8-oxo-dGTP

8-oxo-GTP

5,6-dihydrouracil

5,6-dihydrothymine

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

CDP-4-dehydro-6-deoxy-α-D-glucose

ADP-α-D-glucose

GDP-α-D-perosamine

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-α-D-glucose

GDP-β-L-fucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-D-glucose

dTDP-4-acetamido-4,6-dideoxy-α-D-galactose

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-α-D-galactose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galactofuranose

UDP-β-L-iduronate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

guanine

adenine

uracil

cytosine

thymine

preQ₁

N¹-ethyladenine

N3-methylcytosine

N¹-methyladenine

uridine 3'-monophosphate

cytidine-3'-monophosphate

NAD⁺

NADP⁺

NADH

NADPH

cyclic di-3',5'-guanylate

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

dUMP

dTMP

dCMP

dCDP

dUDP

dTDP

dCTP

dUTP

dTTP

CDP

UDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

UTP

CTP

UMP

CMP

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

2'-deoxyuridine

thymidine

2'-deoxycytidine

adenosine

xanthosine

inosine

guanosine

uridine

cytidine

5-fluorouracil

5'-deoxy-5'-fluoroadenosine

5-fluorocytosine

D-galactonate

D-gluconate

D-mannonate

L-idonate

D-altronate

L-gulonate

aldehydo-L-galactonate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3-dehydro-D-glucopyranose

streptomycin

D-galactosylononitol

galactinol

lotaustralin

taxiphyllin

linamarin

linustatin

neolinustatin

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

D-sedoheptulose 1,7-bisphosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

β-D-fructofuranose 6-phosphate

aldehydo-D-allose 6-phosphate

D-tagatofuranose 1,6-bisphosphate

D-tagatofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

L-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

D-allulose 6-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

β-D-fructofuranose

1,5-anhydro-D-mannitol

keto-D-fructose

keto-L-sorbose

glycolaldehyde

aldehydo-D-ribose

β-D-ribopyranose

α-D-ribofuranose

β-D-ribofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-mannopyranose

β-D-glucopyranose

α-D-glucopyranose

aldehydo-D-mannose

D-glyceraldehyde

D-xylulose

D-ribulose

L-ribulose

L-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

glycerol

D-mannitol

D-sorbitol

D-ribitol

xylitol

XXXG xyloglucan oligosaccharide

colanic acid

β-D-cellobiose

maltotriose

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

sucrose

melibiose

allolactose

α-maltose

α-lactose

α,α-trehalose

maltoheptaose

maltotetraose

maltopentaose

maltohexaose

stachyose

raffinose

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

aldehydo-D-galacturonate

salicylaldehyde

4-methylumbelliferone

scopoletin

coumarin

all-trans-retinol

all-trans-retinyl palmitate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

geranyl diphosphate

apo-4'-lycopenal

all-trans-phytoene

15-cis-phytoene

apo-4'-lycopenoate

streptothricin F

(S)-nicotine

betanidin quinone

betanidin

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(2E,5E)-dodeca-2,5-dienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

geranylgeranyl diphosphate

3-octaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

dioleoyl phosphatidate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

benzyl alcohol

scyllo-inositol

1D-chiro-inositol

myo-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1-keto-D-chiro-inositol

scyllo-inosose

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

D-ononitol

3,4-dihydroxymandelate

3,4-dihydroxyphenylacetate

protocatechuate

2,3-dihydroxybenzoate

3-methylcatechol

catechol

4-methylcatechol

3-sulfocatechol

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

3,5-dichlorocatechol

5-chloro-3-methylcatechol

dopamine

(R)-adrenaline

(R)-noradrenaline

4-chlorocatechol

butan-1-ol

ethanol

propan-1-ol

phytol

methanol

(2E,6E)-farnesal

3-(N-morpholino)propanal

fluoroacetaldehyde

methylglyoxal

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

4-methylbenzaldehyde

benzaldehyde

phytenal

(S)-lactaldehyde

(R)-lactaldehyde

1-octanal

formaldehyde

butan-1-al

acetaldehyde

1-propanal

isobutanal

menadione

caldariellaquinone

diacetyl

acetone

a coenzyme-A group

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

pyruvate

glyoxylate

2-oxoglutarate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

4-aminobenzoate

benzoate

4-methylbenzoate

acetate

L-carnitine

(R)-pantoate

fluoroacetate

orotate

allantoate

5-deoxy-D-glucuronate

D-tagaturonate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

octanoate

decanoate

butanoate

palmitate

stearate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

oleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

(3E,5Z)-tetradecadienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

linoleate

γ-linolenate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

(2E,6E)-farnesoate

3-oxoadipate

formate

propanoate

(R)-lactate

(S)-lactate

4-hydroxybutanoate

(2R,3S)-2-methylisocitrate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(R)-glycerate

(R)-3-hydroxybutanoate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

3-carboxy-cis,cis-muconate

trans-aconitate

cis-aconitate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

(3E)-2-oxohex-3-enedioate

chorismate

D-glucarate

succinate

fumarate

(S)-malate

4-hydroxybenzoate

benzene

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-tyrosol

urate

cyanuric acid

coumarinate

ferulate

myricetin

(+)-taxifolin

quercetin

kaempferol

6,7-dehydrobaicalein

baicalein

(+)-dihydromyricetin

(+)-dihydrokaempferol

2,4-dichlorophenol

3-chlorobenzaldehyde

3-chlorobenzyl alcohol

5-chlorosalicylate

4-chlorosalicylate

2,5-dichlorophenol

2-phenylethylamine

tyramine

serotonin

4-nitrophenol

4-aminophenol

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-9

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

demethylmenaquinol-8

menaquinol-8

ubiquinol-9

ubiquinol-8

ubiquinol-6

ubiquinol-7

ubiquinol-10

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

methyl parathion

parathion

amino-parathion

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

metanephrine

normetanephrine

hydrogen cyanide

acrylonitrile

3-cyanopyridine

propionitrile

(indole-3-yl)acetonitrile

preQ₀

n-butyronitrile

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

7,8-dihydrolumazine

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-phosphate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

thio-molybdenum cofactor

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

riboflavin

FMN

FAD

FADH₂

FMNH₂

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

hydantoin

cob(I)alamin

adenosylcobalamin

sirohydrochlorin

cobyrinate

precorrin-1

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

precorrin-6A

precorrin-5

precorrin-3A

precorrin-2

precorrin-4

precorrin-3B

precorrin-6B

precorrin-8x

precorrin-7

nicotinamide

L-ascorbate

nicotinate

thiamine

4-pyridoxate

pyridoxine 5'-phosphate

pyridoxine

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxal 5'-phosphate

pyridoxal

coenzyme A

(R)-NADHX

(S)-NADHX

glycine betaine

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

D-galactono-1,4-lactone

L-galactono-1,4-lactone

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

crotonobetainyl-CoA

L-carnitinyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

γ-butyrobetainyl-CoA

phenylacetyl-CoA

acryloyl-CoA

3-hydroxypropanoyl-CoA

3'-dephospho-CoA

acetyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

malonyl-CoA

succinyl-CoA

(3S)-citryl-CoA

trans-feruloyl-CoA

2-methylacetoacetyl-CoA

4-hydroxybenzoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

2-methylbutanoyl-CoA

isobutanoyl-CoA

isovaleryl-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

(+)-7-epi-jasmonoyl-CoA

dihomo γ-linolenoyl-CoA

(S)-3-aminobutanoyl-CoA

(2E,5Z)-tetradecenoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

3-oxooctadecanoyl-CoA

3-oxododecanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

hexadecanedioyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

hexanoyl-CoA

decanoyl-CoA

lauroyl-CoA

octanoyl-CoA

butanoyl-CoA

propanoyl-CoA

cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

2-carboxy-cerotoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

androsterone

testosterone

estrone

ethene

phenylacetate

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

(+)-7-epi-jasmonate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3-β-hydroxyandrost-5-en-17-one

cholate

glycocholate

isocholate

3-dehydrocholate

5α-androstane-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

methane

heptadecane

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

pyrazinamide

(S)-(+)-allantoin

6-caprolactam

acetamide

3-chloro-cis,cis-muconate

2-chloroacetate

sn-glycero-3-phosphocholine

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

betaine aldehyde hydrate

choline sulfate

betaine aldehyde

choline

agmatine

spermidine

cadaverine

putrescine

N-acetylputrescine

4-aminobutanal

2-aminoprop-2-enoate

4-[(E)-2-(methylamino)ethenyl]phenol

4-[(Z)-2-aminoethenyl]phenol

(2Z)-2-aminobut-2-enoate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

superoxide

phosphate

triphosphate

diphosphate

chloride

Fe³⁺

ammonium

K⁺