an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2S)-2-isopropylmalate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

cis-coumarinic acid-β-D-glucoside

1,2,3,5-tetrahydroxybenzene

(R)-1-amino-2-propanol O-2-phosphate

5-dehydro-D-gluconate

4-methylumbelliferyl acetate

phloroglucinol

L-dopachrome

prenyl diphosphate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

nicotine-1'-N-oxide

5-oxo-L-proline

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

L-arogenate

dehydroascorbate (bicyclic form)

oxaloacetate

phosphoenolpyruvate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

3-ureidopropanoate

4-methylsalicylate

N,N-dimethylaniline

2,5-dioxopentanoate

(E)-glutaconate

4-amino-2-methyl-5-pyrimidinemethanol

shikimate 3-phosphate

8-amino-7-oxononanoate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

2-isopropylmaleate

succinate semialdehyde

N,N-dimethylaniline-N-oxide

urea-1-carboxylate

5-enolpyruvoyl-shikimate 3-phosphate

3-oxopropanoate

salicyl alcohol

(S)-4-hydroxy-2-oxopentanoate

aminoacetone

6-(2-amino-2-carboxylatoethyl)-7-hydroxy-8-oxo-1,2,3,4,7,8-hexahydroquinoline-2,4-dicarboxylate

anthranilate

(2Z)-2-(acetamidomethylene)succinate

5-dehydro-4-deoxy-D-glucarate

isopentenyl diphosphate

L-β-lysine

4-phosphooxy-L-threonine

N²-succinyl-L-glutamate 5-semialdehyde

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

S-formylglutathione

lipid IV_A

dimethylamine

dihydrolipoamide

2-amino-3-carboxymuconate-6-semialdehyde

4-imidazolone-5-propanoate

1,2-benzoquinone

citrate

3-hydroxy-2-methylpyridine-5-carboxylate

5-hydroxytryptophol

mercuriphenyl acetate

hydrogenobyrinate a,c-diamide

pseudouridine 5'-phosphate

(R)-pantothenate

3-amino-1-hydroxyacetone 1-phosphate

6-phospho D-glucono-1,5-lactone

5-dehydro-2-deoxy-D-gluconate

dethiobiotin

2-keto-L-gulonate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

urocanate

selenophosphate

isochorismate

lipoamide

5-hydroxyindole acetaldehyde

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

pimeloyl-CoA

D-gluconate 6-phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

1-(methylsulfanyl)xylulose 5-phosphate

5-methylsalicylate

3-oxo-5,6-didehydrosuberyl-CoA

6-(2-amino-2-carboxyethyl)-7,8-dioxo-1,2,3,4,7,8-hexahydroquinoline 2,4-dicarboxylate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

4-guanidinobutyramide

butanoyl phosphate

imidazole acetol-phosphate

α-ribazole 5'-phosphate

N-acetyl-D-muramate 6-phosphate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

4-amino-4-deoxychorismate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

2-oxepin-2(3H)-ylideneacetyl-CoA

L-histidinol phosphate

bisorganyltrisulfane

4-guanidinobutanoate

(S)-3-methyl-2-oxopentanoate

3-deoxy-D-arabino-heptulosonate 7-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

tartronate semialdehyde

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

3-dehydroquinate

(S)-5-amino-3-oxohexanoate

α-ribazole

lipid X

1-deoxy-L-glycero-tetrulose 4-phosphate

2-dehydro-3-deoxy-D-galactonate

5-carboxymethyl-2-hydroxymuconate

(3S,5S)-3,5-diaminohexanoate

2,3-didehydroadipyl-CoA

S-methyl-5-thio-α-D-ribose 1-phosphate

dihydroxyacetone

2-dehydro-3-deoxy-D-galactonate 6-phosphate

4-pyridoxolactone

hydrogenobyrinate

glutathione disulfide

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

4-maleyl-acetoacetate

glycerone phosphate

D-erythro-imidazole-glycerol-phosphate

(R)-4'-phosphopantothenoyl-L-cysteine

5-amino-6-(D-ribitylamino)uracil

2-dehydropantoate

N-methylhydantoin

3-methyl-2-oxobutanoate

nigerose

4'-phosphopantetheine

5-hydroxyindole thiazolidine carboxylate

thiamine phosphate

γ-butyrobetaine

N-succinyl-L,L-2,6-diaminopimelate

2-phosphoglycolate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

homogentisate

CO₂

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(3E)-2-oxopent-3-enoate

4-acetamidobutanal

(5S)-5-benzyl-hydantoin

selenodiglutathione

glycolate

2-methylbutanol

N²-succinylglutamate

4-acetamidobutanoate

(E)-4-coumaroyl-CoA

2-oxopent-4-enoate

glutathioselenol

(2R,3S)-3-isopropylmalate

(5R)-5-benzyl-hydantoin

2-dehydro-3-deoxy-D-gluconate

4-fumaryl-acetoacetate

prephytoene diphosphate

preuroporphyrinogen

2-methylbutanal

(2-hydroxyphenyl)acetate

(S)-2,3,4,5-tetrahydrodipicolinate

benzoylsuccinyl-CoA

(2S)-2-isopropyl-3-oxosuccinate

N-succinyl-2-amino-6-ketopimelate

creatinine

shikimate

acetoacetate

pyrazine-2-carboxylate

3-deoxy-D-manno-octulosonate 8-phosphate

xanthine

porphobilinogen

4-methyl-2-oxopentanoate

N⁵-carboxyaminoimidazole ribonucleotide

1-phosphatidyl-myo-inositol

α-D-galactosyl-diphosphoundecaprenol

hydrogen selenide

1-phosphatidyl-myo-inositol 2-mannose

N6'-acetylkanamycin-B

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

(R)-4-phosphopantoate

(R)-2,3-dihydroxy-3-methylpentanoate

H₂

(R)-4'-phosphopantothenate

5-aminolevulinate

5-carboxyamino-1-(5-phospho-D-ribosyl)imidazole

3-deoxy-α-D-manno-2-octulosonate

carbonic acid

O-acetyl-L-serine

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

3-phosphooxypyruvate

isobutanol

(S)-ureidoglycolate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

pyruvic oxime

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

2-(α-hydroxyethyl)thiamine diphosphate

histidinal

(2S,3S)-2,3-dihydroxy-5-oxohexanedioate

(S)-4-amino-5-oxopentanoate

muconolactone

formamide

methylsalicylate

2-hydroxy-5-carboxymethylmuconate semialdehyde

(S)-2-acetolactate

3-methylbutanol

thiamine diphosphate

lipid A disaccharide (E. coli)

5,6-dimethylbenzimidazole

N¹-(5-phospho-β-D-ribosyl)glycinamide

3-deoxy-D-glycero-2,5-hexodiulosonate

pseudouridine

3-methylbutanal

N²-succinyl-L-ornithine

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

histidinol

N²-succinyl-L-arginine

ammonia

2-deoxygluconate

2-carboxy-L-threo-pentonate

4-oxoglutaramate

protoanemonin

3-dehydro-2-deoxy-D-gluconate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

enol-phenylpyruvate

propane-1,3-diamine

hydroxylamine

quinolinate

(4-hydroxyphenyl)acetate

hydroxypyruvate

cis,cis-muconate

N-(5-phosphoribosyl)-anthranilate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

3-(4-hydroxyphenyl)-3-oxo-propionyl-CoA

5,6-dihydroxyindole

2-maleylacetate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

itaconate

(S)-5-hydroxyisourate

D-erythritol 4-phosphate

(S)-2-aceto-2-hydroxybutanoate

(S)-dihydroorotate

(E)-2-benzylidenesuccinyl-CoA

β-nicotinate D-ribonucleotide

L-dehydro-ascorbate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

acetyl phosphate

L-tartrate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

carbon monoxide

2-chloroethanol

2-carboxy-L-xylonolactone

(4,5-dihydro-5-oxofuran-2-yl)-acetate

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

S-ribosyl-L-homocysteine

nicotinate adenine dinucleotide

7,8-diaminopelargonate

chloroacetaldehyde

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

2-iminoacetate

meso-tartrate

sym-homospermidine

indole-3-glycol

4-hydroxybenzaldehyde

N-ethylglycine

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

cyclic- 3,4-O-oxalyl-L-threonate

3-methoxy-4-hydroxyphenylglycolaldehyde

autoinducer 2

3-keto-β-D-galactose

2-hydroxy-3-oxosuccinate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

(4S)-4-hydroxy-2-oxoheptanedioate

5-phospho-β-D-ribosylamine

(2S)-4-acetamido-2-aminobutanoate

adenosine 5'-phosphosulfate

indole-3-glycol aldehyde

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

H₂O

L-canavanine

4-hydroxy-2-nonenal

ethylamine

5-amino-6-(5-phospho-D-ribitylamino)uracil

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

ectoine

prephenate

4-methyl-3-oxoadipate-enol-lactone

acrylamide

orotidine 5'-phosphate

ethanolamine

2-amino-4-[5-(2-amino-2-carboxylatoethyl)-2-hydroxyphenyl]pentanedioate

4-methyl-3-oxoadipate

coproporphyrinogen III

2-amino-4-[3-(2-amino-2-carboxylatoethyl)-6-oxocyclohexa-1,4-dien-1-yl]pentanedioate

acrylate

adenosine 5'-phosphoselenate

N²acetyl-L-2-aminoadipate 6-phosphate

2,3-dioxo-L-gulonate

6-(2-amino-2-carboxylatoethyl)-1,2,3,4-tetrahydroquinoline-2,4-dicarboxylate

oxalosuccinate

3-dehydroshikimate

L-selenocystathionine

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

N²-acetyl-L-2-aminoadipate semialdehyde

L-threonate

2-phenylethanol

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

L-arginino-succinate

carbamoyl phosphate

methylamine

oxalate

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

urea

O-ureido-L-homoserine

hydrogen peroxide

3'-phosphoadenylyl-sulfate

5-amino-6-(5-phospho-D-ribosylamino)uracil

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

cyclic-2,3-O-oxalyl-L-threonate

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

(S)-4-hydroxy-2-oxohexanoate

4-aminobutanoate

vanillin

pyrogallol

1,6-anhydro-N-acetyl-β-muramate

pimelate

(indol-3-yl)acetamide

(2E,6E)-farnesyl diphosphate

pristanate

2,5-dichloro-p-quinol

2-chloroacetate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

3-chloro-cis,cis-muconate

2,5-dichloro-p-quinone

5-chlorosalicylate

4-chlorocatechol

4-chlorosalicylate

4-methylphenol

L-homocysteine

hippurate

protoporphyrin IX

protoporphyrinogen IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

siroheme

hemin

protoheme

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

pyrazinamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(S)-(+)-allantoin

nicotinamide

(indol-3-yl)acetate

phenylacetate

methyl (indol-3-yl)acetate

(+)-7-epi-jasmonate

2-methoxy-6-(all-trans-octaprenyl)phenol

2-chlorobenzoate

5,10-methenyltetrahydrofolate mono-L-glutamate

glycine betaine

betaine aldehyde

choline

choline sulfate

(2Z)-2-aminobut-2-enoate

agmatine

putrescine

spermidine

(R)-2-hydroxyglutarate

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

dimethyl sulfide

S-methyl-L-methionine

methionol

glutathione

(R)-S-lactoylglutathione

thiocyanate

methanethiol

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

L-cysteate

3-sulfopyruvate

taurine

methanesulfonate

isethionate

1-butanesulfonate

3-(all-trans-octaprenyl)benzene-1,2-diol

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

3-oxo-4-pregnene-20-carboxyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3-β-hydroxyandrost-5-en-17-one

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

(S)-3-hydroxy-isobutanoate

4-hydroxybenzoate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

benzene

urate

4-tyrosol

benzyl alcohol

benzyl-6-hydroxy-2-cyclohexene-on-oyl

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

ubiquinol-8

menaquinol-6

menaquinol-8

demethylmenaquinol-6

demethylmenaquinol-8

3-demethylubiquinol-8

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

coumarinate

cis-caffeate

4-methylumbelliferone

coumarin

phenylacetonitrile

2,3-dihydroxybenzoate

protocatechuate

salicylate

4-aminobenzoate

benzoate

4-methylcatechol

L-dopa

catechol

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

IMP

pppGpp

cyclic-AMP

8-oxo-dGTP

ppGpp

8-oxo-GTP

GTP

ADP

cyclic-GMP

dGTP

XMP

2'-deoxyguanosine

GMP

dATP

hypoxanthine

ATP

dADP

GDP

AMP

adenylo-succinate

5'-deoxyadenosine

dGDP

5,6-dihydrouracil

5,6-dihydrothymine

CMP-3-deoxy-β-D-manno-octulosonate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-glucose

UDP-α-D-sulfoquinovopyranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-galactose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-α-D-glucose

CDP-α-D-glucose

ADP-α-D-glucose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

GDP-α-D-mannose

GDP-α-D-mannuronate

cyclic ADP-ribose

ADP-D-ribose

thymidine

cytidine

uridine

adenosine

inosine

xanthosine

guanosine

NADPH

NADH

NADP⁺

NAD⁺

cyclic di-3',5'-guanylate

dTDP

UDP

CDP

CMP

UMP

UTP

CTP

β-nicotinamide D-ribonucleotide

dTMP

dCMP

dUMP

dUTP

dTTP

dCTP

uracil

cytosine

thymine

adenine

guanine

preQ₁

D-galactono-1,4-lactone

D-glucono-1,5-lactone

all-trans-retinyl palmitate

(2E,5Z)-tetradecenoyl-CoA

3'-dephospho-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-methylglutaconyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

isobutanoyl-CoA

isovaleryl-CoA

3-methylcrotonyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(E)-glutaconyl-CoA

(R)-2-hydroxyglutaryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

4-hydroxybenzoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

(S)-3-aminobutanoyl-CoA

malonyl-CoA

γ-butyrobetainyl-CoA

2-methylbutanoyl-CoA

2-methylacetoacetyl-CoA

phenylacetyl-CoA

linoleoyl-CoA

succinyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

acetyl-CoA

(3S)-hydroxyadipyl-CoA

α-linolenoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

itaconyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

L-carnitinyl-CoA

methylacrylyl-CoA

crotonobetainyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

phytenoyl-CoA

crotonyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

oleoyl-CoA

pristanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

cerotoyl-CoA

butanoyl-CoA

propanoyl-CoA

decanoyl-CoA

octanoyl-CoA

3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxooctadecanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

(S)-malyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

ethylphosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

di-trans,octa-cis-undecaprenyl phosphate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

all-trans-retinol

apo-4'-lycopenal

apo-4'-lycopenoate

15-cis-phytoene

all-trans-phytoene

3-octaprenyl-4-hydroxybenzoate

(S)-1-pyrroline-5-carboxylate

6,7-dimethyl-8-(1-D-ribityl)lumazine

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

FAD

FMN

riboflavin

FMNH₂

reduced riboflavin

FADH₂

orotate

adenosylcobalamin

cob(I)alamin

precorrin-4

precorrin-1

cobalt-precorrin-3

cobalt-precorrin-4

precorrin-7

precorrin-5

precorrin-2

precorrin-6B

precorrin-6A

cobalt-precorrin-5A

cobalt-precorrin-7

precorrin-8x

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

precorrin-3A

cobalt-precorrin-2

precorrin-3B

sirohydrochlorin

cobyrinate

hydantoin

kanamycin B

vanillylamine

leucodopachrome

(S)-nicotine

betanidin

betanidin quinone

coenzyme A

carboxyphosphinopyruvate

3-(hydroxyphosphinoyl)pyruvate

1-carboxyvinyl carboxyphosphonate

L-ascorbate

thiamine

nicotinate

L-carnitine

menaquinone-7

4-pyridoxate

pyridoxal

pyridoxal 5'-phosphate

pyridoxine

pyridoxine 5'-phosphate

pyridoxamine

pyridoxamine 5'-phosphate

methylglyoxal

(2Z)-3-(3,4-dioxocyclohexa-1,5-dien-1-yl)prop-2-enoate

dopaquinone

pyrroloquinoline quinone

2-demethylmenaquinone-7

diacetyl

glycolaldehyde

phytenal

L-sorbosone

β-D-galactopyranose

α-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

α-D-mannopyranose

α-D-xylopyranose

α-L-rhamnopyranose

β-L-rhamnopyranose

α-L-arabinopyranose

D-glyceraldehyde

formaldehyde

1-octanal

acetaldehyde

butan-1-al

1-propanal

isobutanal

(S)-lactaldehyde

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

superoxide

chloride

phosphonate

phosphate

triphosphate

diphosphate

Fe³⁺

K⁺

H⁺

ammonium

Zn²⁺

Hg²⁺

Mn²⁺

Mo²⁺

Fe²⁺

Co²⁺

Ni²⁺

Cu²⁺

adenosylcobyrate

adenosylcobalamin 5'-phosphate

cob(II)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobinamide

adenosyl-cobinamide phosphate

cob(I)inamide

adenosylcobinamide-GDP

2-iminosuccinate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

maltotriose

β-D-cellobiose

XXXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

raffinose

stachyose

maltotetraose

sucrose

lactose

melibiose

allolactose

α,α-trehalose

α-maltose

1-O-acetyl-α-maltose

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

lotaustralin

neolinustatin

linustatin

taxiphyllin

linamarin

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 1,7-bisphosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-fructose 1,6-bisphosphate

L-fuculose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-fructofuranose 6-phosphate

6-deoxy-5-ketofructose 1-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (S. aureus)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

L-sorbosone 1,4-lactone

L-sorbosone 2,6-lactone

β-D-fructofuranose

D-xylulose

N-acetyl-β-D-glucosamine

4-deoxy-L-threo-hex-4-enopyranuronate

glycerol

galactitol

D-mannitol

D-arabinitol

erythritol

L-idonate

D-galactonate

D-altronate

D-gluconate

D-mannonate

2-octaprenylphenol

3,5-cyclohexadiene-1,2-diol-1-carboxylate

ethylene glycol

(S)-propane-1,2-diol

butan-1-ol

ethanol

propan-1-ol

methanol

phytol

myo-inositol

1-keto-D-chiro-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

L-α-amino-ε-keto-pimelate

L-citrulline

L-ornithine

L-glutamate-5-semialdehyde

O-phospho-L-homoserine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

S-sulfo-L-cysteine

L-aspartate 4-semialdehyde

L-homoserine

O-succinyl-L-homoserine

L-canaline

L-cystine

L-selenocysteine

meso-diaminopimelate

L-lysine

L-allo-threonine

L-isoleucine

L-valine

L-leucine

L-serine

L-alanine

L-threonine

L-tyrosine

L-glutamine

L-phenylalanine

L-glutamate

L-proline

L-aspartate

L-histidine

L-cysteine

L-tryptophan

L-asparagine

L-methionine

L-arginine

glycine

D-proline

D-alanine

D-glutamate

D-aspartate

N-carbamoylsarcosine

creatine

(R)-β-lysine

β-alanine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

L-selenomethionine

L-aspartyl-4-phosphate

S-sulfanyl-L-cysteine

seleno-L-homocysteine

L-2-amino-3-oxobutanoate

3-phospho-L-serine

sarcosine

N⁶,N⁶-dimethyl-L-arginine

O-acetyl-L-homoserine

N-carbamoyl-L-aspartate

N-carbamoylglycine

N-acetyl-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-aspartate

N-acetyl-L-citrulline

N-formyl-L-glutamate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-formyl-L-methionine

L-threo-3-phenylserine

L-2,4-diaminobutanoate

L-isoglutamine

L,L-diaminopimelate

L-cystathionine

4,5-dioxo-4,5-dihydro-1H-pyrrolo[2,3-f]quinoline-2,7,9-tricarboxylate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

chorismate

fumarate

succinate

(S)-malate

D-galactarate

(R)-lactate

(S)-lactate

(R)-2-hydroxybutanoate

(R)-glycerate

(R)-3-hydroxybutanoate

acetate

(R)-pantoate

D-tagaturonate

3-oxoadipate

3-(carbamoylamino)-2-methylpropanoate

decanoate

octanoate

pyruvate

formate

propanoate

butanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

2-oxoglutarate

glyoxylate

2-oxobutanoate

(15Z)-tetracosenoate

oleate

(3E,5Z)-tetradecadienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

phytenate

stearate

palmitate

Hg⁰

oxygen

hydrogen sulfide

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(S)-ureidoglycine

(glutathion-S-yl)-4-hydroxy-2-nonenal

(Z)-phenylacetaldehyde oxime

sn-glycerol 3-phosphate

(S)-NADHX

(R)-NADHX

preQ₀

acrylonitrile

3-cyanopyridine

(indole-3-yl)acetonitrile

hydrogen cyanide

2-hydroxy-2-methylpropanenitrile

(2R)-2-hydroxy-2-methylbutanenitrile

N₂

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

nitric oxide

monodehydroascorbate radical

hydroxyl radical