an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2-hydroxyphenyl)acetate

3-maleylpyruvate

3-fumarylpyruvate

DNA without lesion

2-dehydro-3-deoxy-D-gluconate 6-phosphate

7,8-didemethyl-8-hydroxy-5-deazariboflavin

glutathione disulfide

D-phenylhydantoin

N-carbamoyl-D-phenylglycine

3-keto-β-D-galactose

coniferaldehyde

4-coumaraldehyde

(S)-5-hydroxyisourate

H₂

3α,7α-dihydroxy-24-oxo-5β-cholestanoyl CoA

3-oxo-3-phenylpropanoyl-CoA

itaconate

dihydroxyacetone

3-deoxy-D-arabino-heptulosonate 7-phosphate

methylamine

N-ethylglycine

2-iminoacetate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

N-Formyl-L-kynurenine

2-aminoacetaldehyde

benzoylsuccinyl-CoA

(S)-mandelate

(R)-mandelate

3-ureidopropanoate

5-oxo-L-proline

carbonic acid

(L-threonylcarbamoyl)adenylate

dimethylamine

6-amino-2-oxohexanoate

sinapate

sinapoyl-CoA

5-hydroxyferulate

5-hydroxy-feruloyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

ammonia

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

(S)-2-amino-6-oxohexanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

hydrogenobyrinate

(2S)-4-acetamido-2-aminobutanoate

ectoine

4-methylsalicylate

5-methylsalicylate

arsenite

(+)-muconolactone

cis,cis-muconate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

glutathionylspermidine

ethanolamine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

carbon monoxide

β-D-ribosylnicotinate

4-methylumbelliferyl glucoside

4-hydroxybenzaldehyde

scopolin

cis-coumarinic acid-β-D-glucoside

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

hydrogen selenide

O-acetyl-L-serine

xanthine

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

4-prenylphlorisobutyrophenone

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

salicyl alcohol

methylsalicylate

muconolactone

(4,5-dihydro-5-oxofuran-2-yl)-acetate

3-methylmuconolactone

4-methyl-3-oxoadipate-enol-lactone

4-fumaryl-acetoacetate

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol

indole-3-glycol aldehyde

isobutanol

3-methylbutanol

3-methylbutanal

2-methylbutanol

2-methylbutanal

2-phenylethanol

nigerose

N-acetyl-D-muramate 6-phosphate

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

4-pyridoxolactone

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

2-O-(6-phospho-α-D-mannosyl)-D-glycerate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

3-hydroxypropanoate

2-(α-hydroxyethyl)thiamine diphosphate

2-maleylacetate

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

4-acetamidobutanal

4-acetamidobutanoate

hydroxyatrazine

N-isopropylammelide

ethylamine

(S)-ureidoglycolate

tartronate semialdehyde

5-amino-6-(D-ribitylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

acetoacetate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

3'-phosphoadenylyl-sulfate

shikimate

anthranilate

N-(5-phosphoribosyl)-anthranilate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

L-histidinol phosphate

histidinal

histidinol

nicotinate adenine dinucleotide

4-imidazolone-5-propanoate

(E)-3-(methoxycarbonyl)pent-2-enedioate

5,6-dimethylbenzimidazole

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

α-ribazole 5'-phosphate

bisorganyltrisulfane

3-oxopropanoate

4-aminobutanoate

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

enol-phenylpyruvate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

poly(ribitol phosphate)

O-D-alanyl-poly(ribitol phosphate)

3-dehydroquinate

3-dehydroshikimate

4-oxoglutaramate

1-piperideine-2-carboxylate

1-piperideine 6-carboxylate

urea

pimeloyl-CoA

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

dethiobiotin

S-adenosyl 3-(methylsulfanyl)propylamine

succinate semialdehyde

shikimate 3-phosphate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

3-phosphooxypyruvate

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

citrate

4-amino-4-deoxychorismate

2-C-methyl-D-erythritol 4-phosphate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

5-aminolevulinate

porphobilinogen

preuroporphyrinogen

(S)-4-amino-5-oxopentanoate

hydrogenobyrinate a,c-diamide

5-dehydro-4-deoxy-D-glucarate

2,5-dioxopentanoate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

O-ureido-L-homoserine

canavaninosuccinate

L-canavanine

L-arginino-succinate

propionamide

(indol-3-yl)acetamide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

isopentenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

urocanate

D-gluconate 6-phosphate

homogentisate

4-maleyl-acetoacetate

prephenate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

carbamoyl phosphate

(S)-dihydroorotate

orotidine 5'-phosphate

(R)-4'-phosphopantothenoyl-L-cysteine

6-phospho D-glucono-1,5-lactone

5-enolpyruvoyl-shikimate 3-phosphate

5-deoxy-α-ribose 1-phosphate

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

α-D-glucosamine 1-phosphate

oxalate

oxaloacetate

coproporphyrinogen III

4'-phosphopantetheine

thiamine phosphate

thiamine diphosphate

glycerone phosphate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

oxalosuccinate

aminoacetone

acetyl phosphate

2-dehydropantoate

prenyl diphosphate

(2S)-2-isopropylmalate

phosphoenolpyruvate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

H₂O

(R)-4'-phosphopantothenate

CO₂

β-nicotinate D-ribonucleotide

quinolinate

hydrogen peroxide

(R)-pantothenate

1-pyrroline

formamide

selenodiglutathione

glutathioselenol

isopropylamine

L-3-cyclohex-2'-enylalanine

3-[(1S)-cyclohex-3-en-1-yl)]-2-oxopropanoate

3-(cyclohexa-1,3-dien-1-yl)-2-oxopropanoate

dehydroprephenate

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

protoanemonin

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

cyclohexane-1-carbonyl-CoA

cyclohexane-1-carboxylate

3-oxopimeloyl-CoA

3-hydroxypimeloyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

cyclohex-1,5-diene-1-carbonyl-CoA

crotonate

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

2-amino-3-carboxymuconate-6-semialdehyde

glycolate

hydroxypyruvate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

5-aminopentanoate

(2R,4S)-2, 4-diaminopentanoate

(2R)-2-amino-4-oxopentanoate

4-amino-2-methyl-5-pyrimidinemethanol

dialurate

(R)-1-amino-2-propanol O-2-phosphate

5-dehydro-2-deoxy-D-gluconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

N¹-amidinostreptamine 6-phosphate

streptidine 6-phosphate

streptomycin 6-phosphate

CDP-N-methyl-L-glucosamine

dTDP-L-dihydrostreptose

dihydrostreptomycin 6-phosphate

O-1,4-α-L-dihydrostreptosyl-streptidine 6-phosphate

2-oxoglutaramate

S-ribosyl-L-homocysteine

autoinducer 2

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

α-ribazole

squalene

hop-22(29)-ene

prephytoene diphosphate

(2S)-lactyl-2-diphospho-5'-guanosine

(2E,6E)-farnesyl diphosphate

pristanate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

2-iminopropanoate

2-iminobutanoate

2-iminosuccinate

ethylphosphate

adenosylcobalamin

cob(I)alamin

cobalt-precorrin-6B

cobalt-precorrin-6A

adenosylcobyrate

Mg-protoporphyrin

cob(II)yrinate c-monoamide

cobyrinate

cob(II)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

cobalt-factor III

cobalt-precorrin-3

cobalt-sirohydrochlorin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-5B

cobalt-precorrin-4

cobalt-precorrin-5A

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

protochlorophyllide a

adenosylcobalamin 5'-phosphate

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

protoheme

hydrogen cyanide

N₂

protoporphyrinogen IX

protoporphyrin IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

(Z,Z)-biliverdin-IX α

(Z,Z)-bilirubin-IX α

hydrogen sulfide

oxygen

sn-glycerol 1-phosphate

sn-glycerol 3-phosphate

2-O-(α-D-glucopyranosyl)-3-phospho-D-glycerate

2,3-diphospho-D-glycerate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-O-(α-D-glucopyranosyl)-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-3-phospho-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2S)-2-phospholactate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

1-oleoyl-2-lyso-glycerone phosphate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-3-hydroxy-isobutanoate

superoxide

nitric oxide

hydroxyl radical

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

DNA with lesion

phenylacetate

S-(hydroxymethyl)glutathione

methionol

3-(methylsulfanyl)propanal

S-methyl-L-methionine

dimethyl sulfide

3-sulfino-L-alanine

glutathione

thiocyanate

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

taurine

L-cysteate

3-sulfopyruvate

(2R)-3-sulfolactate

methanesulfonate

1-butanesulfonate

isethionate

3-(N-morpholino)propanesulfonate

(2R)-phospho-3-sulfolactate

(R)-S-lactoylglutathione

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

hydrogensulfite

hydrogencarbonate

chloride

phosphate

triphosphate

diphosphate

Fe³⁺

ammonium

H⁺

Co²⁺

Fe²⁺

Mg²⁺

glycine betaine

betaine aldehyde

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

4-aminobutanal

putrescine

spermidine

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

fluoroacetaldehyde

fluoroacetate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

chloroethylmalonyl-CoA

4-chloro-crotonyl-CoA

4-chloro-3-hydroxybutyryl-CoA

5-chloro-5-deoxy-D-ribose

5-chloro-5-deoxy-D-ribono-γ-lactone

3-chloro-cis,cis-muconate

4-chlorosalicylate

5-chlorosalicylate

4-chlorocatechol

allantoate

acetamide

isopenicillin N

penicillin N

(S)-(+)-allantoin

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

nicotinamide

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-26-oxocholest-4-en-3-one

(25S)-26-hydroxycholest-4-en-3-one

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3-oxocholest-4,24-dien-26-oyl-CoA

cholest-4-en-3-one

androst-4-ene-3,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

cholesteryl-β-D-glucoside

stigmasterol 3-O-β-D-glucoside

solasodine 3-O-β-D-glucoside

brassicasterol 3-O-β-D-glucoside

β-sitosterol 3-O-β-D-glucoside

solasodine

cholest-5-en-3-one

cholesterol

(+)-7-epi-jasmonate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

L-homocysteine

4-methylphenol

trans-feruloyl-CoA

3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA

choloyl-CoA

chenodeoxycholoyl-CoA

4-cis-undecenoyl-CoA

4-trans-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

(3E)-dec-3-enoyl-CoA

benzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

4-hydroxybenzoyl-CoA

itaconyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

trans-caffeoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

isobutanoyl-CoA

phenylacetyl-CoA

dihomo γ-linolenoyl-CoA

(+)-7-epi-jasmonoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

malonyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

(2E,5Z)-tetradecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

methylacrylyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

formyl-CoA

oxalyl-CoA

succinyl-CoA

3'-dephospho-CoA

2-methylacetoacetyl-CoA

acetyl-CoA

2-methylbutanoyl-CoA

(E)-glutaconyl-CoA

glutaryl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-octadec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(E)-cinnamoyl-CoA

phytanoyl-CoA

(S)-malyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

lauroyl-CoA

hexanoyl-CoA

decanoyl-CoA

octanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxododecanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

all-trans-retinyl palmitate

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

FMNH₂

FMN

FAD

FADH₂

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

caldariellaquinol

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-8

caldariellaquinone

coenzyme A

oxidized coenzyme F₄₂₀-0

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

thiamine

riboflavin

nicotinate

pyridoxal

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxamine

pyridoxine

menadione

all-trans-retinol

(S)-1-pyrroline-5-carboxylate

salinosporamide A

precorrin-6A

precorrin-2

precorrin-3A

precorrin-4

precorrin-5

precorrin-6B

precorrin-7

precorrin-8x

precorrin-1

precorrin-3B

sirohydrochlorin

hydantoin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

guanine

adenine

2'-deoxyguanosine

2'-deoxyadenosine

2'-deoxyinosine

guanosine

xanthosine

inosine

adenosine

hypoxanthine

dIMP

dGMP

dAMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

GMP

IMP

XMP

AMP

XTP

ITP

GTP

ATP

5,6-dihydrouracil

5,6-dihydrothymine

dUTP

dTDP

dTTP

dCTP

dCMP

uracil

orotate

CTP

UTP

dUMP

dTMP

dUDP

UDP

dCDP

CDP

UDP-α-D-galactose

UDP-α-D-glucose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-4-O-demethyl-β-L-noviose

dTDP-4-dehydro-5-methyl-β-L-rhamnose

dTDP-β-L-rhamnose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-D-glucose

cytidine

uridine

thymidine

2'-deoxycytidine

2'-deoxyuridine

thymine

UMP

CMP

isoguanine

preQ₁

scopoletin

coumarin

4-methylumbelliferone

taxiphyllin

linustatin

neolinustatin

linamarin

lotaustralin

acrylonitrile

preQ₀

2-hydroxy-2-methylpropanenitrile

(2R)-2-hydroxy-2-methylbutanenitrile

urate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

4-tyrosol

4-hydroxybenzoate

salicylaldehyde

cyanuric acid

actinorhodin intermediate

actinorhodin

atrazine

3-methoxy-4-hydroxyphenylglycol

cinnamaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

hydroquinone

menadiol

2,3-dihydroxybenzoate

catechol

4-methylcatechol

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

protocatechuate

enterobactin

4-coumarate

coumarinate

trans-caffeate

salicylate

4-aminobenzoate

benzoate

L-serine

β-alanine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

L-proline

L-leucine

L-glutamine

L-alanine

glycine

D-glutamate

L-glutamate

L-lysine

L-arginine

L-histidine

L-aspartate

L-asparagine

L-tyrosine

L-threonine

L-cysteine

L-tryptophan

L-phenylalanine

D-lysine

D-alanine

D-aspartate

D-proline

D-ornithine

L-saccharopine

2-hydroxy-5-oxoproline

S-sulfanyl-L-cysteine

L-aspartyl-4-phosphate

L-2-amino-3-oxobutanoate

sarcosine

N⁶,N⁶-dimethyl-L-arginine

N-carbamoylglycine

formyl-L-isoglutamine

N-formyl-L-methionine

N-formimino-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-methionine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

O-acetyl-L-homoserine

3-phospho-L-serine

L-citrulline

L-valine

L-isoleucine

hypoglycin A

L-glutamate-5-semialdehyde

S-sulfo-L-cysteine

L-cystine

L-ornithine

O-succinyl-L-homoserine

S-adenosyl-L-homocysteine

L-aspartate 4-semialdehyde

L-homoserine

O-phospho-L-homoserine

S-adenosyl-L-methionine

1-aminocyclopropane-1-carboxylate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-allo-threonine

L-methionine

L-isoglutamine

L-2,4-diaminobutanoate

L-cystathionine

L,L-diaminopimelate

chorismate

(4S)-4-hydroxy-2-oxoglutarate

fumarate

succinate

(S)-malate

D-glucarate

3-(carbamoylamino)-2-methylpropanoate

cis-aconitate

trans-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

(R)-3-hydroxybutanoate

(S)-lactate

(R)-lactate

pyruvate

acetate

formate

propanoate

butanoate

decanoate

octanoate

3-oxoadipate

(15Z)-tetracosenoate

oleate

(3E,5Z)-tetradecadienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

γ-linolenate

di-homo-γ-linolenate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

apo-4'-lycopenoate

phytenate

palmitate

stearate

(R)-pantoate

5-deoxy-D-glucuronate

D-gluconate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

glyoxylate

2-oxobutanoate

2-oxoglutarate

a coenzyme-A group

methylglyoxal

diacetyl

acetone

glycolaldehyde

3-(N-morpholino)propanal

1-propanal

isobutanal

formaldehyde

butan-1-al

1-octanal

acetaldehyde

(R)-lactaldehyde

(S)-lactaldehyde

phytenal

D-glyceraldehyde

L-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-ribopyranose

α-D-galactopyranose

β-D-galactopyranose

α-D-xylopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

propan-1-ol

ethanol

methanol

butan-1-ol

phytol

glycerol

D-ribitol

xylitol

galactitol

(3R)-linalool

(3S)-linalool

myo-inositol

1D-chiro-inositol

scyllo-inositol

scyllo-inosose

1-keto-D-chiro-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

D-1-guanidino-3-amino-1,3-dideoxy-scyllo-inositol

D-1-guanidino-1-deoxy-3-dehydro-scyllo-inositol

1-guanidino-1-deoxy-scyllo-inositol

1-amino-1-deoxy-scyllo-inositol

1-guanidino-1-deoxy-scyllo-inositol 4-phosphate

1-amino-1-deoxy-scyllo-inositol 4-phosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

1-palmitoyl-sn-glycero-3-phosphocholine

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-sn-glycerol 3-phosphate

1,2-dipalmitoyl-sn-glycero-3-phosphocholine

dioleoyl phosphatidate

1-18:1-2-18:1-phosphatidylethanolamine

di-trans,octa-cis-undecaprenyl phosphate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

geranylgeranyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

apo-4'-lycopenal

15-cis-phytoene

all-trans-phytoene

brassicasterol

stigmasterol

sitosterol

4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-oxobutanoate

(S)-4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-hydroxybutanoate

phlorisovalerophenone

5-deoxy-dihydrokalafungin

(S)-DNPA

2-((1R,3S),-1',9'-dihydroxy-1'-methyl-10'-oxo-3',4',5',10'-tetrahydro-1H-benzo[g]isochromen-3'-yl)acetate

deoxyhumulone

4-prenylphlorisovalerophenone

deoxycohumulone

3,5,7,9,11,13,15,17,19-nonaoxoicosanoate

dihydrokalafungin

streptomycin

(3aS)-jadomycin A

3-(2-formyl-6-hydroxy-4-methylphenyl)-8-hydroxy-1,4-dioxonaphthalene-2-carboxylate

dehydrorabelomycin

8-methyltetraphene-1,5,6,11,12-pentol

prejadomycin

UWM6

rabelomycin

1-(β-D ribofuranosyl)nicotinamide

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

maltotriose

maltotetraose

maltopentaose

maltoheptaose

maltohexaose

α-maltose

allolactose

sucrose

α,α-trehalose

α-lactose

β-D-cellobiose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

β-D-fructofuranose

D-xylulose

D-ribulose

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

N-monoacetylchitobiose 6'-phosphate

N,N'-diacetylchitobiose 6'-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

β-D-cellobiose 6'-phosphate

GDP-α-D-glucose

ADP-α-D-glucose

GDP-α-D-mannose

GDP-α-D-mannuronate

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

D-tagatofuranose 1,6-bisphosphate

β-D-fructose 1,6-bisphosphate

arbutin-6-phosphate

salicin 6-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

methyl β-D-glucoside 6-phosphate

cyclic-GMP

cyclic-AMP

8-oxo-dGTP

8-oxo-dGMP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

adenylo-succinate

5'-deoxyadenosine

8-oxo-GTP

8-oxo-GMP

pppGpp

ppGpp

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

hypoglycin B