an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

ectoine

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

α-D-galactosyl-diphosphoundecaprenol

ManNAc-GlcNAc-PP-undecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

D-erythro-imidazole-glycerol-phosphate

3-ureidopropanoate

2,5-didehydro-D-gluconate

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

cis-3-phenylcyclohexa-3,5-diene-1,2-diol

hydrogenobyrinate

acetyl phosphate

N-(2,3-dihydroxybenzoyl)-L-serine trimer

N²-succinylglutamate

4-hydroxy-2-nonenal

(L-threonylcarbamoyl)adenylate

creatinine

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

DNA without lesion

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

benzoylsuccinyl-CoA

(5R)-5-benzyl-hydantoin

(5S)-5-benzyl-hydantoin

hydrogenobyrinate a,c-diamide

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

iminodiacetate

nitrilotriacetate

nigerose

methylsalicylate

salicyl alcohol

2-keto-L-gulonate

4-acetamidobutanoate

4-acetamidobutanal

N²-succinyl-L-glutamate 5-semialdehyde

4-amino-4-deoxychorismate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

presqualene diphosphate

squalene

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

3-maleylpyruvate

(R)-1-amino-2-propanol O-2-phosphate

3'-ketosucrose

H₂

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

4-aminobutanoate

butanoyl phosphate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

2,6-dioxo-6-phenylhexa-3-enoate

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

isochorismate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

1,4-dihydroxy-2-naphthoate

1,4-dihydroxy-2-naphthoyl-CoA

4-amino-2-methyl-5-pyrimidinemethanol

N⁵-carboxyaminoimidazole ribonucleotide

1-methylurate

1-methylxanthine

3-methylurate

3-methylxanthine

1,3-dimethylurate

theophylline

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

3-hydroxy-2-methylpyridine-5-carboxylate

(2Z)-2-(acetamidomethylene)succinate

(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoate

glutathione disulfide

autoinducer 2

2-amino-3-carboxymuconate-6-semialdehyde

L-rhamnono-1,4-lactone

2-iminoacetate

1,6-anhydro-N-acetyl-β-muramate

glutathioselenol

selenodiglutathione

2-dehydro-6-phospho-D-gluconate

protoanemonin

2-hydroxy-1,4-benzoquinone

4-oxoglutaramate

ammonia

5-hydroxyindole thiazolidine carboxylate

xanthurenate

kynurenate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

L-dehydro-ascorbate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

H₂O

3-deoxy-α-D-manno-2-octulosonate

3-deoxy-D-manno-octulosonate 8-phosphate

5-amino-6-(D-ribitylamino)uracil

CO₂

orotidine 5'-phosphate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

(S)-2-amino-6-oxohexanoate

1-piperideine 6-carboxylate

S-adenosyl 3-(methylsulfanyl)propylamine

phosphoenolpyruvate

glycerone phosphate

5-(methylsulfanyl)-α-D-ribose

S-methyl-5'-thioadenosine

S-ribosyl-L-homocysteine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

(S)-2,3,4,5-tetrahydrodipicolinate

γ-L-glutamyl 5-phosphate

coproporphyrinogen III

thiamine phosphate

glycolate

2-phosphoglycolate

(S)-dihydroorotate

hydrogen selenide

O-acetyl-L-serine

2-amino-2-deoxy-D-gluconate 6-phosphate

N-acetyl-D-muramate 6-phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

homogentisate

(2-hydroxyphenyl)acetate

enol-phenylpyruvate

α-D-glucosamine 1-phosphate

carbamoyl phosphate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

4'-phosphopantetheine

(R)-pantothenate

2-dehydropantoate

3-methyl-2-oxobutanoate

quinolinate

β-nicotinate D-ribonucleotide

pimeloyl-CoA

8-amino-7-oxononanoate

dethiobiotin

7,8-diaminopelargonate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

hydrogen peroxide

acetoacetate

3-amino-1-hydroxyacetone 1-phosphate

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-dehydroshikimate

shikimate

3-dehydroquinate

L-quinate

(S)-4-amino-5-oxopentanoate

5-dehydro-4-deoxy-D-glucarate

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribitylamino)uracil

N,N-dimethylaniline-N-oxide

N,N-dimethylaniline

nicotine-1'-N-oxide

urea

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N¹-(5-phospho-β-D-ribosyl)glycinamide

L-arginino-succinate

L-canavanine

canavaninosuccinate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

preuroporphyrinogen

porphobilinogen

L-tartrate

2-hydroxy-3-oxosuccinate

meso-tartrate

S-formylglutathione

citrate

oxaloacetate

1-deoxy-L-glycero-tetrulose 4-phosphate

L-selenocystathionine

S-acetyldihydrolipoamide

dihydrolipoamide

N-succinyl-2-amino-6-ketopimelate

lipid IV_A

lipid A disaccharide (E. coli)

oxalosuccinate

2,5-dioxopentanoate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-gluconate 6-phosphate

acrylamide

propionamide

butyramide

(indol-3-yl)acetamide

urocanate

4-imidazolone-5-propanoate

carbon monoxide

5-enolpyruvoyl-shikimate 3-phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

(2S)-2-isopropylmalate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

nicotinate adenine dinucleotide

3-phosphonopyruvate

prephenate

shikimate 3-phosphate

5-phospho-β-D-ribosylamine

O-ureido-L-homoserine

lipid X

2-C-methyl-D-erythritol 4-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

prephytoene diphosphate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

ethanolamine

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

formamide

3-hydroxyanthranilate

anthranilate

N-Formyl-L-kynurenine

xanthine

N-succinyl-L,L-2,6-diaminopimelate

L-histidinol phosphate

imidazole acetol-phosphate

histidinol

histidinal

3-deoxy-D-arabino-heptulosonate 7-phosphate

6-phospho D-glucono-1,5-lactone

5-aminolevulinate

N-(5-phosphoribosyl)-anthranilate

thiamine diphosphate

4-fumaryl-acetoacetate

4-methylmuconolactone

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

muconolactone

cis,cis-muconate

(+)-muconolactone

3-oxopropanoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphosulfate

L-gulono-1,4-lactone

2-dehydro-3-deoxy-L-rhamnonate

L-rhamnonate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

β-D-ribosylnicotinate

4-(2-aminophenyl)-2,4-dioxobutanoate

4-(2-amino-3-hydroxyphenyl)-2,4-dioxobutanoate

carbonic acid

hydroxypyruvate

3-methylmuconolactone

4-methylsalicylate

5-methylsalicylate

oxalate

tartronate semialdehyde

(2S,3S)-2,3-dihydroxy-5-oxohexanedioate

(S)-4-hydroxy-2-oxopentanoate

2-keto-D-gluconate

2-oxopent-4-enoate

(3E)-2-oxopent-3-enoate

(2E)-2-hydroxypenta-2,4-dienoate

5-carboxymethyl-2-hydroxymuconate

2-maleylacetate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

2-aminoacetaldehyde

propane-1,3-diamine

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

isopentenyl diphosphate

prenyl diphosphate

5-oxo-L-proline

6-deoxyerythronolide B

3-phosphooxypyruvate

succinate semialdehyde

urea-1-carboxylate

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

(S)-ureidoglycolate

3-mercaptopyruvate

3α,7α-dihydroxy-24-oxo-5β-cholestanoyl CoA

(E)-3-(methoxycarbonyl)pent-2-enedioate

2-dehydro-3-deoxy-D-galactonate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

2-(α-hydroxyethyl)thiamine diphosphate

L-arogenate

4-maleyl-acetoacetate

O-D-alanyl-poly(ribitol phosphate)

poly(ribitol phosphate)

(R)-3-((R)-3-hydroxybutanoyloxy)-butanoate

adenosine 5'-phosphoselenate

5-methylcytosine

3-demethylubiquinol-6

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

2,3,5,6-tetracholorophenol

3-hydroxypropanoate

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol aldehyde

indole-3-glycol

isobutanol

3-methylbutanal

3-methylbutanol

2-methylbutanal

2-methylbutanol

2-phenylethanol

(4-hydroxyphenyl)acetate

coniferaldehyde

phenylglyoxylate

4-hydroxybenzaldehyde

2-(4-hydroxyphenyl)-2-oxoacetate

4-pyridoxolactone

2-dehydro-3-deoxy-D-gluconate

2-iminobutanoate

2-iminosuccinate

2-iminopropanoate

cyanophycin primer-L-aspartate

cyanophycin primer

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

hypoglycin B

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

L-kynurenine

L-leucine

glycine

L-alanine

L-selenocysteine

L-phenylalanine

L-tryptophan

L-proline

L-isoleucine

L-valine

L-methionine

L-cysteine

N^ω-hydroxy-L-arginine

L-isoglutamine

L-aspartate

L-tyrosine

L-asparagine

L-glutamate

L-glutamine

L-serine

L-ornithine

L-arginine

L-cystathionine

L-aspartyl-4-phosphate

L-threonine

L-histidine

L-lysine

L,L-diaminopimelate

L-2,4-diaminobutanoate

N-carbamoyl-L-aspartate

N⁶-acetyl-N⁶-hydroxy-L-lysine

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

L-citrulline

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-glutamate-5-semialdehyde

1-aminocyclopropane-1-carboxylate

S-sulfo-L-cysteine

L-homocysteine

O-phospho-L-homoserine

L-homoserine

3-sulfino-L-alanine

hypoglycin A

L-aspartate 4-semialdehyde

L-canaline

O-succinyl-L-homoserine

D-ornithine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-saccharopine

seleno-L-homocysteine

L-selenomethionine

O-acetyl-L-homoserine

(3S)-3-hydroxy-L-aspartate

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

N⁶-hydroxy-L-lysine

N-carbamoylglycine

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

3-phospho-L-serine

D-serine

D-alanine

D-glutamate

D-aspartate

D-phenylalanine

creatine

β-alanine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

a coenzyme-A group

ITP

IDP

dITP

dIDP

cyclic-GMP

dGMP

dAMP

isoguanine

8-oxo-dGTP

8-oxo-GTP

AMP

ADP

ATP

adenylo-succinate

GDP

GTP

dADP

dATP

dGDP

dGTP

cyclic-AMP

GMP

IMP

5'-deoxyadenosine

XMP

2'-deoxyinosine

2'-deoxyadenosine

hypoxanthine

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

2'-deoxyguanosine

guanosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

adenosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

ppGpp

pppGpp

5,6-dihydrouracil

5,6-dihydrothymine

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-β-L-fucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-viosamine

dTDP-D-desosamine

dTDP-β-L-mycarose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-α-D-glucose

UDP-N-acetyl-α-D-mannosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

adenine

guanine

uracil

cytosine

thymine

preQ₁

cyclic di-3',5'-guanylate

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

dCMP

dTMP

dUMP

dCDP

dTDP

dUDP

dTTP

dUTP

dCTP

UDP

CDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

UTP

CTP

UMP

CMP

2-hydroxy-dATP

5-hydroxy-CTP

NAD⁺

NADP⁺

NADH

NADPH

uridine 3'-monophosphate

cytidine-3'-monophosphate

adenosine

inosine

xanthosine

guanosine

uridine

cytidine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5-fluorouracil

5-fluorocytosine

D-gluconate

L-gulonate

D-galactonate

D-altronate

1-(β-D ribofuranosyl)nicotinamide

3-dehydro-D-glucopyranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (mycobacteria)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (E. faecium, tetrapeptide)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

β-D-fructofuranose

L-sorbosone 2,6-lactone

L-sorbosone 1,4-lactone

keto-D-fructose

α-D-galactopyranose

β-D-galactopyranose

β-D-ribopyranose

β-D-mannopyranose

β-D-glucopyranose

α-D-glucopyranose

aldehydo-D-mannose

L-sorbosone

keto-L-sorbose

D-glyceraldehyde

glycolaldehyde

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

glycerol

D-mannitol

D-sorbitol

L-iditol

D-arabinitol

maltotriose

sucrose

α,α-trehalose

maltotetraose

maltopentaose

maltohexaose

aldehydo-D-galacturonate

salicylaldehyde

all-trans-retinal

all-trans-retinol

all-trans-retinoate

all-trans-retinyl palmitate

(3S)-2,3-epoxy-2,3-dihydrosqualene

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(2E,6E)-farnesyl diphosphate

geranial

(3S)-linalool

(3R)-linalool

geranyl diphosphate

apo-4'-lycopenal

crocetin dialdehyde

15-cis-phytoene

apo-4'-lycopenoate

crocetin

erythromycin D

3-α-mycarosylerythronolide B

aerobactin

N¹-citryl-N⁶-acetyl-N⁶-hydroxy-L-lysine

ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex

ferric-enterobactin complex

iron(III) dicitrate

erythronolide B

(S)-nicotine

betanidin quinone

betanidin

(3R)-hydroxy-nonanoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

geranylgeranyl diphosphate

all-trans-heptaprenyl diphosphate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1-palmitoyl-2-linoleoyl-phosphatidylcholine

1-oleoyl-2-lyso-glycerone phosphate

1-linoleoyl-sn-glycero-3-phosphocholine

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

1,2-dibutyrin

tributyrin

geranate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

pyruvate

2-oxobutanoate

2-oxoglutarate

glyoxylate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

protocatechuate

salicylate

2,3-dihydroxybenzoate

4-aminobenzoate

benzoate

allantoate

gentisate

acetate

(R)-pantoate

orotate

(S)-1-pyrroline-5-carboxylate

D-tagaturonate

pristanate

heptanoate

butanoate

octanoate

decanoate

palmitate

dinor-12-oxo-phytodienoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

γ-linolenate

(3E,5Z)-tetradecadienoate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

oleate

linoleate

(15Z)-tetracosenoate

phytenate

3-oxoadipate

formate

propanoate

(S)-lactate

(R)-lactate

(2R,3S)-2-methylisocitrate

(R)-glycerate

(R)-3-hydroxybutanoate

3-carboxy-cis,cis-muconate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

cis-aconitate

trans-aconitate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

(3E)-2-oxohex-3-enedioate

chorismate

3-methyl-cis,cis-muconate

D-glucarate

D-galactarate

fumarate

succinate

(S)-malate

hydroxyquinol

myo-inositol

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

hydroquinone

biphenyl-2,3-diol

4,6-dichloro-3-methylcatechol

4-methylcatechol

4-chlorocatechol

catechol

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

(R,R)-2,3-butanediol

butan-1-ol

ethanol

propan-1-ol

phytol

methanol

3-(N-morpholino)propanal

methylglyoxal

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

phytenal

(R)-lactaldehyde

(S)-lactaldehyde

1-heptanal

1-octanal

acetaldehyde

formaldehyde

butan-1-al

1-propanal

isobutanal

(R)-acetoin

2,5-dichloro-p-quinone

menadione

caldariellaquinone

diacetyl

acetone

4-hydroxyacetophenone

biphenyl

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-hydroxybenzoate

urate

4-tyrosol

phenylacetonitrile

ferulate

delphinidin

pelargonidin

cyanidin

6,7-dehydrobaicalein

baicalein

(-)-epigallocatechin

(-)-epiafzelechin

(-)-epicatechin

(1R,2S)-4,6-dichloro-3-methylcyclohexa-3,5-diene-1,2-diol

2,4-dichlorotoluene

2,4,5-trichlorophenol

2,4,5-trichloro-phenoxyacetate

4-chlorosalicylate

5-chlorosalicylate

3-chlorobenzoate

3-chlorobenzaldehyde

pentachlorophenol

4-aminophenol

4-nitrophenol

4-methylphenol

2,3,6-trichlorohydroquinone

2,6-dichlorohydroquinone

2,5-dichloro-p-quinol

5-chlorohydroxyquinone

5-chlorohydroxyquinol

menadiol

2,3,5,6-tetrachlorohydroquinone

caldariellaquinol

3-demethylubiquinol-9

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

demethylmenaquinol-8

demethylmenaquinol-7

menaquinol-8

menaquinol-7

ubiquinol-9

ubiquinol-8

ubiquinol-6

ubiquinol-7

ubiquinol-10

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

preQ₀

acrylonitrile

3-cyanopyridine

propionitrile

(indole-3-yl)acetonitrile

3-cyano-L-alanine

hydrogen cyanide

n-butyronitrile

7,8-dihydrolumazine

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

molybdopterin

cyclic pyranopterin phosphate

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

riboflavin

FMN

FAD

reduced riboflavin

FADH₂

FMNH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

hydantoin

cobyrinate

sirohydrochlorin

precorrin-3B

precorrin-6B

precorrin-8x

precorrin-7

precorrin-3A

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

precorrin-5

precorrin-4

precorrin-2

precorrin-1

adenosylcobalamin

cob(I)alamin

thiamine

L-ascorbate

nicotinamide

nicotinate

4-pyridoxate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxine

pyridoxamine

pyridoxal

coenzyme A

(R)-NADHX

(S)-NADHX

glycine betaine

D-glucono-1,5-lactone

3-chloro-2-methyl-dienelactone

3,5-dichloro-2-methyl-muconolactone

2-chloro-5-methyl-dienelactone

cis-dienelactone

trans-dienelactone

isobutanoyl-CoA

isovaleryl-CoA

(2E,5Z)-tetradecenoyl-CoA

(E)-glutaconyl-CoA

acryloyl-CoA

phenylacetyl-CoA

2-methylbutanoyl-CoA

malonyl-CoA

acetyl-CoA

3'-dephospho-CoA

succinyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

4-hydroxybenzoyl-CoA

(2S)-methylsuccinyl-CoA

2-methylacetoacetyl-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

oxalyl-CoA

formyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

choloyl-CoA

3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA

chenodeoxycholoyl-CoA

(3S)-citryl-CoA

benzoyl-CoA

3-hydroxypropanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxo-palmitoyl-CoA

3-oxooctadecanoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

hexadecanedioyl-CoA

palmitoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

octanoyl-CoA

decanoyl-CoA

lauroyl-CoA

hexanoyl-CoA

propanoyl-CoA

butanoyl-CoA

cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

2-carboxy-cerotoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

methyl (indol-3-yl)acetate

phenylacetate

(indol-3-yl)acetate

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3-oxochol-4-en-24-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(S)-(+)-allantoin

acetamide

2-chloroacetate

3-chloro-2-methyl-maleylacetate

2-chloro-5-methyl-maleylacetate

2-chloromaleylacetate

3,5-dichloro-2-methyl-muconate

3-chloro-cis,cis-muconate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

betaine aldehyde hydrate

betaine aldehyde

choline

spermidine

putrescine

cadaverine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

selenite

hydrogensulfite

OH^-

hydrogencarbonate

thiosulfate

molybdate

nitrite

superoxide

nitrate

sulfate

sulfite

selenate

chloride

phosphonate

phosphate

diphosphate

triphosphate

Fe³⁺

Zn²⁺

Mg²⁺

Co²⁺

Fe²⁺

Cu²⁺

Ni²⁺

Cd²⁺

H⁺

K⁺

ammonium

trimethyl sulfonium

dimethyl sulfide

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

glutathione

(R)-S-lactoylglutathione

taurine

3-sulfopyruvate

L-cysteate

1-butanesulfonate

isethionate

3-(N-morpholino)propanesulfonate

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

thiocyanate

S-sulfanylglutathione

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

4-nitrophenyl phosphate

hippurate

nitric oxide

hydroxyl radical

monodehydroascorbate radical

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

hydrogen sulfide

oxygen

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

Mg-protoporphyrin

magnesium-protoporphyrin IX 13-monomethyl ester

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

protoporphyrinogen IX

protoporphyrin IX

protoheme

(Z,Z)-biliverdin-IX α

adenosylcobalamin 5'-phosphate

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

adenosylcobyrate

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

cobalt-sirohydrochlorin

cobalt-factor III

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

phosphonoacetaldehyde

ethylphosphate

(Z)-phenylacetaldehyde oxime

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal