an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

L-dehydro-ascorbate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

bisorganyltrisulfane

4-oxalocrotonate

2,6-dioxo-6-phenylhexa-3-enoate

4-oxoglutaramate

1-piperideine 6-carboxylate

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

α-D-galacturonate 1-phosphate

2-keto-L-gulonate

selenodiglutathione

glutathioselenol

formamide

isopropylamine

N⁵-carboxyaminoimidazole ribonucleotide

autoinducer 2

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

cis,cis-muconate

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

pyruvic oxime

(2Z)-2-(acetamidomethylene)succinate

3-hydroxy-2-methylpyridine-5-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

7-epicholate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

(R)-1-amino-2-propanol O-2-phosphate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-pyrone-4,6-dicarboxylate

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

(salicyl)adenylate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

5,6-dimethylbenzimidazole

dialurate

6-phospho D-glucono-1,5-lactone

2-dehydro-6-phospho-D-gluconate

cis-3,4-dehydroadipyl-CoA semialdehyde

cis-3,4-dehydroadipyl-CoA

3,6-lactone of 3-hydroxyadinyl-CoA

trans-2,3-dehydroadipyl-coA

4-amino-2-methyl-5-pyrimidinemethanol

butanoyl phosphate

mercuriphenyl acetate

2-amino-3-carboxymuconate-6-semialdehyde

hydroxypyruvate

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

(2E)-2-hydroxypenta-2,4-dienoate

(3E)-2-oxopent-3-enoate

2-oxopent-4-enoate

L-selenocystathionine

(S)-ureidoglycolate

2-chloroethanol

chloroacetaldehyde

squalene

presqualene diphosphate

prephytoene diphosphate

2-iminoacetate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

N-Formyl-L-kynurenine

3-hydroxyanthranilate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

lipid X

2,3-epoxy-2,3-dihydrobenzoyl-CoA

4-amino-4-deoxychorismate

5-carboxymethyl-2-hydroxymuconate

(5S)-5-benzyl-hydantoin

(5R)-5-benzyl-hydantoin

acetyl phosphate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

3-hydroxypropanoate

(24E)-3α,7α-dihydroxy-5β-cholest-24-enoyl-CoA

(24R,25R)-3α,7α,24-trihydroxy-5β-cholestanoyl CoA

pimeloyl-CoA

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

dethiobiotin

N,N-dimethylaniline

N,N-dimethylaniline-N-oxide

nicotine-1'-N-oxide

imidazole acetaldehyde

4-imidazoleacetate

5-hydroxyindole acetate

3,4-dihydroxyphenylacetaldehyde

prop-2-ynal

propynoate

D-glucurono-6,3-lactone

dimethylsulfoniopropanoate

γ-butyrobetaine

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxymuconate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

estrone 3-sulfate

ethanolamine

coenzyme B

methanophenazine

CoB-CoM heterodisulfide

dihydromethanophenazine

(L-threonylcarbamoyl)adenylate

(S)-5-hydroxyisourate

3-maleylpyruvate

benzoylsuccinyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-ureidopropanoate

vanillin

3-deoxy-α-D-manno-2-octulosonate

phthalate

2,2'-disulfonyl azobenzene

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

(S)-4-hydroxy-2-oxopentanoate

2-maleylacetate

streptomycin 3''-phosphate

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol

indole-3-glycol aldehyde

isobutanol

3-methylbutanol

3-methylbutanal

2-methylbutanol

2-methylbutanal

2-phenylethanol

homogentisate

(2-hydroxyphenyl)acetate

2-oleoylglycerol

creatinine

4-hydroxy-2-nonenal

salicyl alcohol

methylsalicylate

4-carboxy-2-hydroxymuconate-6-semialdehyde

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

(S)-2-amino-6-oxohexanoate

4-maleyl-acetoacetate

N-succinyl-L,L-2,6-diaminopimelate

1-deoxy-L-glycero-tetrulose 4-phosphate

3-mercaptopyruvate

carbon monoxide

(4S)-4-hydroxy-2-oxoheptanedioate

succinate semialdehyde

L-tartrate

meso-tartrate

2-hydroxy-3-oxosuccinate

hydrogenobyrinate a,c-diamide

3'-phosphoadenylyl-sulfate

hydrogenobyrinate

H₂

2-(α-hydroxyethyl)thiamine diphosphate

4-pyridoxolactone

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

4'-phosphopantetheine

(R)-4'-phosphopantothenoyl-L-cysteine

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

thiamine phosphate

thiamine diphosphate

2-phosphoglycolate

prephenate

ammonia

hydroxylamine

4-fumaryl-acetoacetate

carbonic acid

DNA without lesion

xanthine

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

5-oxo-L-proline

urea-1-carboxylate

glycolate

5-amino-6-(D-ribitylamino)uracil

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

4-acetamidobutanal

4-acetamidobutanoate

α-ribazole

α-ribazole 5'-phosphate

nicotinate adenine dinucleotide

hydrogen peroxide

N-(2,3-dihydroxybenzoyl)-L-serine trimer

muconolactone

3-methylmuconolactone

(4,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate-enol-lactone

4-methyl-3-oxoadipate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

D-erythro-imidazole-glycerol-phosphate

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

3-(2,3-dihydroxyphenyl)propanoate

(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

2-(4-hydroxyphenyl)-2-oxoacetate

4-hydroxybenzaldehyde

phenylglyoxylate

quinolinate

hydroxyatrazine

N-isopropylammelide

ethylamine

5-dehydro-4-deoxy-D-glucarate

2,5-dioxopentanoate

5-methylcytosine

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

4-imidazolone-5-propanoate

urocanate

acetoacetate

hydrogen selenide

O-acetyl-L-serine

preuroporphyrinogen

urea

N-(5-phosphoribosyl)-anthranilate

anthranilate

(R)-4'-phosphopantothenate

(S)-dihydroorotate

L-canavanine

3-demethylubiquinol-6

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

3-phosphooxypyruvate

oxalosuccinate

enol-phenylpyruvate

2-C-methyl-D-erythritol 4-phosphate

carbamoyl phosphate

3-oxopropanoate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

selenophosphate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

(S)-4-amino-5-oxopentanoate

(R)-pantothenate

2-dehydropantoate

prenyl diphosphate

isopentenyl diphosphate

D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

glutathione disulfide

(indol-3-yl)pyruvate

(indol-3 yl)acetyl-CoA

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

cyanate

orotidine 5'-phosphate

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

glycerone phosphate

3-deoxy-D-manno-octulosonate 8-phosphate

5-aminolevulinate

porphobilinogen

tartronate semialdehyde

5-enolpyruvoyl-shikimate 3-phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

β-nicotinate D-ribonucleotide

β-D-ribosylnicotinate

3-dehydroshikimate

propionamide

(indol-3-yl)acetamide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

(E)-3-(methoxycarbonyl)pent-2-enedioate

citrate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

N¹-(5-phospho-β-D-ribosyl)glycinamide

coproporphyrinogen III

lipid A disaccharide (E. coli)

lipid IV_A

2-keto-D-gluconate

2,5-didehydro-D-gluconate

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

5-dehydro-D-gluconate

2-aminoacetaldehyde

shikimate

shikimate 3-phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

histidinal

histidinol

imidazole acetol-phosphate

L-histidinol phosphate

α-D-glucosamine 1-phosphate

phosphoenolpyruvate

oxaloacetate

S-ribosyl-L-homocysteine

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

CO₂

γ-L-glutamyl 5-phosphate

O-ureido-L-homoserine

canavaninosuccinate

L-arginino-succinate

5-phospho-β-D-ribosylamine

H₂O

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

phenylacetate

ethylphosphate

phosphonoacetaldehyde

cobalt-factor III

cobalt-precorrin-3

cobalt-sirohydrochlorin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

cobalt-precorrin-4

cobalt-precorrin-5A

adenosyl-cobinamide phosphate

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

protochlorophyllide a

Mg-protoporphyrin

cob(II)yrinate c-monoamide

cobyrinate

adenosylcobyrate

cob(II)yrinate a,c-diamide

cob(I)alamin

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

adenosylcobalamin

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

protoheme

N₂

hydrogen cyanide

protoporphyrin IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrinogen IX

(Z,Z)-biliverdin-IX α

S⁰

Hg⁰

hydrogen sulfide

oxygen

sn-glycerol 3-phosphate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

Reactive Blue 5

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(S)-ureidoglycine

1-oleoyl-2-lyso-glycerone phosphate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

monodehydroascorbate radical

hydroxyl radical

superoxide

nitric oxide

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

dimethyl sulfide

S-methyl-L-methionine

3-dimethylsulfoniopropionaldehyde

methionol

3-(methylsulfanyl)propanal

S-(hydroxymethyl)glutathione

thiocyanate

methanethiol

glutathione

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

sulfoacetaldehyde

coenzyme M

taurine

3-(N-morpholino)propanesulfonate

isethionate

1-butanesulfonate

3-sulfocatechol

(R)-S-lactoylglutathione

Fe³⁺

Pb²⁺

Zn²⁺

Cd²⁺

Mo²⁺

Hg²⁺

Cu²⁺

Co²⁺

Fe²⁺

Mg²⁺

ammonium

K⁺

H⁺

trimethyl sulfonium

sulfate

OH^-

selenite

molybdate

hydrogensulfite

selenide

tetrathionate

nitrite

selenate

thiosulfate

nitrate

hydrogencarbonate

sulfite

phosphonate

phosphate

triphosphate

diphosphate

chloride

2-iminopropanoate

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

spermine

putrescine

spermidine

glycine betaine

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

allantoate

acetamide

(S)-(+)-allantoin

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

ethene

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

estrone

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

3-dehydrocholate

isocholate

glycocholate

cholate

3-β-hydroxyandrost-5-en-17-one

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

2-methylbutanoyl-CoA

acryloyl-CoA

crotonobetainyl-CoA

trans-feruloyl-CoA

3-hydroxypropanoyl-CoA

(24R,25R)-3α,7α,12α,24-tetrahydroxy-5β-cholestanoyl CoA

(24E)-3α,7α,12α-trihydroxy-5β-cholest-24-enoyl-CoA

γ-butyrobetainyl-CoA

L-carnitinyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

benzoyl-CoA

salicyl-CoA

gentisyl-CoA

(E)-glutaconyl-CoA

phenylacetyl-CoA

isovaleryl-CoA

3-methylcrotonyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

4-hydroxybenzoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

(2E,5Z)-tetradecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

3'-dephospho-CoA

linoleoyl-CoA

α-linolenoyl-CoA

malonyl-CoA

2-methylacetoacetyl-CoA

isobutanoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

succinyl-CoA

acetyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

methylacrylyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-octadec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

lauroyl-CoA

hexanoyl-CoA

decanoyl-CoA

octanoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

all-trans-retinyl palmitate

L-galactono-1,4-lactone

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

FAD

FADH₂

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

ubiquinol-10

ubiquinol-7

ubiquinol-6

ubiquinol-8

ubiquinol-9

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-10

3-demethylubiquinol-7

3-demethylubiquinol-8

3-demethylubiquinol-9

molybdopterin

coenzyme A

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

L-ascorbate

nicotinate

riboflavin

4-pyridoxate

pyridoxamine

pyridoxine

pyridoxal

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

L-carnitine

menadione

all-trans-retinol

(S)-1-pyrroline-5-carboxylate

precorrin-1

precorrin-2

precorrin-3A

precorrin-3B

precorrin-7

precorrin-8x

precorrin-6B

precorrin-4

precorrin-5

precorrin-6A

sirohydrochlorin

hydantoin

9H carbazole

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

cyclic pyranopterin phosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

guanine

adenine

2'-deoxyguanosine

2'-deoxyadenosine

2'-deoxyinosine

guanosine

inosine

xanthosine

adenosine

hypoxanthine

dAMP

dGMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

IMP

XMP

GMP

AMP

ITP

GTP

ATP

5,6-dihydrouracil

5,6-dihydrothymine

dUMP

orotate

cytosine

dCMP

UDP

UTP

dUDP

dUTP

dTTP

dCDP

dCTP

CDP

CTP

uracil

dTMP

dTDP

UDP-α-D-galacturonate

UDP-α-D-galactofuranose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-glucuronate

UDP-α-D-galactose

UDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

5-fluorouracil

cytidine

uridine

thymine

CMP

UMP

isoguanine

preQ₁

acrylonitrile

preQ₀

(indole-3-yl)acetonitrile

salicylaldehyde

cyanuric acid

toluene

benzene

2'-aminobiphenyl-2,3-diol

(2E,4E)-6-(2-aminophenyl)-2-hydroxy-6-oxohexa-2,4-dienoate

4-tyrosol

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

urate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

4-hydroxybenzoate

atrazine

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

phenol

4-methylphenol

2,3-dihydroxybenzoate

3,4-dihydroxymandelate

3,4-dihydroxyphenylacetate

3-methylcatechol

4-methylcatechol

biphenyl-2,3-diol

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

protocatechuate

catechol

3-hydroxy-trans-cinnamate

ferulate

2,3-dihydroxy-trans-cinnamate

trans-cinnamate

vanillate

salicylate

5-chloroprotocatechuate

4-aminobenzoate

benzoate

(3E)-2-oxohex-3-enedioate

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

chorismate

(4S)-4-hydroxy-2-oxoglutarate

succinate

fumarate

L-aspartate

(S)-malate

D-glucarate

3-(carbamoylamino)-2-methylpropanoate

(2R,3S)-2-methylisocitrate

cis-2-methylaconitate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

3-carboxy-cis,cis-muconate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(2S,3S)-2-methylcitrate

cis-aconitate

trans-aconitate

D-threo-isocitrate

gentisate

(R)-3-hydroxybutanoate

(R)-lactate

(S)-lactate

formate

acetate

propanoate

pyruvate

butanoate

decanoate

octanoate

(2E,6E)-farnesoate

3-oxoadipate

(15Z)-tetracosenoate

oleate

(3E,5Z)-tetradecadienoate

γ-linolenate

linoleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

apo-4'-lycopenoate

phytenate

palmitate

pristanate

1-palmitoyl-2-linoleoyl-phosphatidylcholine

1-linoleoyl-sn-glycero-3-phosphocholine

(R)-pantoate

D-gluconate

aldehydo-D-galacturonate

aldehydo-D-glucuronate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

2-oxobutanoate

2-oxoglutarate

L-kynurenine

L-α-amino-ε-keto-pimelate

carbamate

D-serine

L-serine

creatine

β-alanine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

L-alanine

L-proline

L-leucine

glycine

L-glutamine

D-glutamate

L-glutamate

N^ω-hydroxy-L-arginine

L-arginine

L-lysine

L-histidine

L-cysteine

L-asparagine

L-tyrosine

L-threonine

L-phenylalanine

L-tryptophan

D-aspartate

D-alanine

L-saccharopine

seleno-L-homocysteine

L-selenomethionine

L-aspartyl-4-phosphate

sarcosine

N-carbamoylglycine

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-methionine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

3-hydroxy-L-kynurenine

O-acetyl-L-homoserine

L-threonine 3-O-phosphate

3-phospho-L-serine

L-citrulline

L-valine

L-isoleucine

L-4-hydroxyglutamate semialdehyde

O-succinyl-L-homoserine

hypoglycin A

L-canaline

S-sulfo-L-cysteine

L-homoserine

L-aspartate 4-semialdehyde

O-phospho-L-homoserine

L-homocysteine

S-adenosyl-L-methionine

L-ornithine

S-adenosyl-L-homocysteine

L-glutamate-5-semialdehyde

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-methionine

L-isoglutamine

L-cystathionine

L,L-diaminopimelate

a coenzyme-A group

methylglyoxal

diacetyl

(2E,6E)-farnesal

3-(N-morpholino)propanal

glycolaldehyde

1-propanal

formaldehyde

1-octanal

butan-1-al

isobutanal

acetaldehyde

(S)-lactaldehyde

phytenal

L-glyceraldehyde

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

butan-1-ol

propan-1-ol

ethanol

methanol

phytol

glycerol

(2E,6E)-farnesol

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

apo-4'-lycopenal

15-cis-phytoene

all-trans-phytoene

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

(3S)-2,3-epoxy-2,3-dihydrosqualene

di-trans,octa-cis-undecaprenol

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

(S)-nicotine

vanillylamine

ferric-enterobactin complex

ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex

streptomycin

1-(β-D ribofuranosyl)nicotinamide

sucrose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

β-D-fructofuranose

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

GDP-α-D-mannose

GDP-α-D-mannuronate

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

L-gulonate

aldehydo-L-galactonate

L-idonate

8-oxo-GTP

8-oxo-dGTP

cyclic-AMP

ppGpp

pppGpp

5'-deoxyadenosine

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

5-fluorocytosine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5-hydroxy-CTP

2-hydroxy-dATP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

hypoglycin B

hippurate

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

2-iminosuccinate

2-iminobutanoate