an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

1-piperideine 6-carboxylate

4-oxoglutaramate

ammonia

5,6-dihydroxyindole

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

H₂O

2,3-didehydroadipyl-CoA

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

benzoylsuccinyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

N-acetyl-L-glutamate 5-semialdehyde

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinyl-L-ornithine

O-ureido-L-homoserine

carbamoyl phosphate

(S)-dihydroorotate

oxaloacetate

2-phenylethanol

2-methylbutanal

2-methylbutanol

3-methylbutanal

3-methylbutanol

isobutanol

indole-3-glycol aldehyde

indole-3-glycol

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

glycerone phosphate

shikimate 3-phosphate

shikimate

CO₂

4-pyridoxolactone

(2S)-2-isopropylmalate

3-methyl-2-oxobutanoate

H₂

dimethylsulfoniopropanoate

4-acetamidobutanoate

4-acetamidobutanal

D-glucurono-6,3-lactone

propynoate

prop-2-ynal

3,4-dihydroxyphenylacetaldehyde

5-hydroxyindole acetate

4-imidazoleacetate

imidazole acetaldehyde

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

mesaconate

γ-butyrobetaine

citrate

7,8-diaminopelargonate

(S)-2-amino-6-oxohexanoate

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

succinate semialdehyde

prenyl diphosphate

isopentenyl diphosphate

coproporphyrinogen III

aminoacetone

urea

L-canavanine

carbonic acid

dethiobiotin

quinolinate

β-nicotinate D-ribonucleotide

hydrogen peroxide

2-dehydropantoate

(R)-pantothenate

propionamide

(indol-3-yl)acetamide

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

β-D-fructose 2,6-bisphosphate

histidinol

histidinal

urocanate

phosphonoacetate

3-oxopropanoate

4-aminobutanoate

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-gluconate 6-phosphate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

N-acetyl-D-muramate 6-phosphate

phosphoenolpyruvate

dihydroxyacetone

5-amino-6-(D-ribitylamino)uracil

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-α-D-ribose

methylamine

acetoacetate

4-fumaryl-acetoacetate

(L-threonylcarbamoyl)adenylate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

5-enolpyruvoyl-shikimate 3-phosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

ADP-L-glycero-β-D-manno-heptose

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

adenosine 3',5'-bisphosphate

4-amino-4-deoxychorismate

4-methyl-2-oxopentanoate

(S)-4-hydroxy-2-oxopentanoate

2-oxopent-4-enoate

orotidine 5'-phosphate

L-gulono-1,4-lactone

4-hydroxy-2-nonenal

N-carbamoylputrescine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

4-phosphooxy-L-threonine

DNA without lesion

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

L-selenocystathionine

5-methylcytosine

lipid IV_A

lipid A disaccharide (E. coli)

4-maleyl-acetoacetate

homogentisate

(4S)-4-hydroxy-2-oxoheptanedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(2-hydroxyphenyl)acetate

4-imidazolone-5-propanoate

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

porphobilinogen

core oligosaccharide-lipid A (E. coli K-12 core type)

M_LPS

α-D-glucopyranosyl-diphosphoundecaprenol

ethanolamine

oxalosuccinate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

xanthine

O-acetyl-L-serine

3-dehydroshikimate

3-dehydroquinate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

tartronate semialdehyde

hydroxypyruvate

hydrogen selenide

β-D-ribosylnicotinate

3-deoxy-D-manno-octulosonate 8-phosphate

2-C-methyl-D-erythritol 4-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

formamide

glycolate

2-phosphoglycolate

anthranilate

N-(5-phosphoribosyl)-anthranilate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

N-Formyl-L-kynurenine

3-hydroxyanthranilate

lipid X

4'-phosphopantetheine

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

nicotinate adenine dinucleotide

2-oleoylglycerol

α-D-glucosamine 1-phosphate

S-formylglutathione

ectoine

presqualene diphosphate

squalene

prephytoene diphosphate

FK-506

31-O-desmethylFK-506

(R)-1-amino-2-propanol O-2-phosphate

itaconate

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

α-ribazole 5'-phosphate

α-ribazole

5,6-dimethylbenzimidazole

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

butyramide

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

2,2'-disulfonyl azobenzene

phthalate

S-methyl-5'-thioadenosine

3-ureidopropanoate

thiamine phosphate

2-maleylacetate

3-keto-β-D-galactose

salicyl alcohol

cis-coumarinic acid-β-D-glucoside

scopolin

4-hydroxybenzaldehyde

4-methylumbelliferyl glucoside

canavaninosuccinate

L-arginino-succinate

S-ribosyl-L-homocysteine

5-deoxy-α-ribose 1-phosphate

2-dehydro-3-deoxy-D-gluconate

6-phospho D-glucono-1,5-lactone

ADP-D-glycero-β-D-manno-heptose

3-oxopristanoyl-CoA

4,8,12-trimethyltridecanoyl-CoA

sym-homospermidine

propane-1,3-diamine

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

prephenate

L-histidinol phosphate

imidazole acetol-phosphate

S-adenosyl 3-(methylsulfanyl)propylamine

3-deoxy-D-arabino-heptulosonate 7-phosphate

tryptamine

5-methoxyindoleacetaldehyde

5-methoxytryptamine

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

selenophosphate

3-phosphooxypyruvate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

γ-L-glutamyl 5-phosphate

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

3-deoxy-D-glycero-2,5-hexodiulosonate

preuroporphyrinogen

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

2-dehydro-3-deoxy-D-galactonate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

D-erythro-imidazole-glycerol-phosphate

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

N-acetylglutamyl-phosphate

(S)-ureidoglycolate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

iminodiacetate

nitrilotriacetate

3-deoxy-α-D-manno-2-octulosonate

acetyl phosphate

carbon monoxide

dimethyl sulfoxide

5-dehydro-4-deoxy-D-glucarate

1,6-anhydro-N-acetyl-β-muramate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

N⁵-carboxyaminoimidazole ribonucleotide

2-amino-3-carboxymuconate-6-semialdehyde

3'-phosphoadenylyl-sulfate

octopamine

(4-hydroxyphenyl)acetate

(R)-synephrine

propan-2-ol

glutathione disulfide

D-glycero-β-D-manno-heptose 1-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

autoinducer 2

dialurate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

2-dehydro-6-phospho-D-gluconate

2-keto-D-gluconate

glutathioselenol

selenodiglutathione

2-iminoacetate

1,4-dihydroxy-2-naphthoate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

3-hydroxy-2-methylpyridine-5-carboxylate

(2Z)-2-(acetamidomethylene)succinate

5-oxo-L-proline

N²-succinyl-L-arginine

N²-succinylglutamate

L-dopachrome

(2E,6E)-farnesyl diphosphate

pristanate

L-α-amino-ε-keto-pimelate

L-kynurenine

L-methionine

L-cysteine

L-phenylalanine

L-alanine

glycine

L-valine

L-leucine

L-isoleucine

L-proline

L-selenocysteine

L-tryptophan

L-isoglutamine

L-glutamate

L-ornithine

L-tyrosine

L-aspartate

L-2,4-diaminobutanoate

L-glutamine

L-lysine

L-threonine

L-serine

L-arginine

L-histidine

L-asparagine

L-cystathionine

L-aspartyl-4-phosphate

L,L-diaminopimelate

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

L-citrulline

L-canaline

L-homocysteine

O-succinyl-L-homoserine

1-aminocyclopropane-1-carboxylate

L-aspartate 4-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

O-phospho-L-homoserine

S-sulfo-L-cysteine

L-homoserine

L-glutamate-5-semialdehyde

L-dopa

D-ornithine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-2-amino-3-oxobutanoate

seleno-L-homocysteine

L-selenomethionine

O-acetyl-L-homoserine

L-proline betaine

3-hydroxy-L-kynurenine

N-carbamoylglycine

N-acetyl-L-methionine

N-acetyl-L-glutamate

sarcosine

S-methyl-L-methionine

(2S, 3S)-3-methylaspartate

L-threonine 3-O-phosphate

3-phospho-L-serine

D-lysine

D-alanine

D-glutamate

D-proline

D-aspartate

D-serine

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

ADP

ATP

5'-deoxyadenosine

AMP

GDP

GTP

pppGpp

GMP

dITP

dIDP

ITP

IDP

dGTP

dGDP

dATP

dADP

2'-deoxyinosine

2'-deoxyadenosine

XMP

IMP

adenylo-succinate

hypoxanthine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

2'-deoxyguanosine

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

dIMP

XTP

dGMP

dAMP

ppGpp

2'-deoxyuridine

2'-deoxycytidine

thymidine

inosine

adenosine

guanosine

xanthosine

uridine

cytidine

5,6-dihydrothymine

5,6-dihydrouracil

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

UDP-α-D-galactose

UDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galactofuranose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-glucosamine 3'-phosphate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

adenine

guanine

uracil

thymine

cytosine

preQ₁

N¹-ethyladenine

N3-methylcytosine

N¹-methyladenine

UTP

CTP

dTTP

dUTP

dCTP

CMP

UMP

UDP

CDP

dUDP

dCDP

dTDP

dTMP

dUMP

dCMP

NAD⁺

NADP⁺

NADH

NADPH

cyclic di-3',5'-guanylate

β-nicotinamide D-ribonucleotide

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

5-fluorouracil

5'-deoxy-5'-fluoroadenosine

5-fluorocytosine

L-gulonate

D-gluconate

D-altronate

D-mannonate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3'-ketolactose

lotaustralin

methyl β-D-glucoside 6-phosphate

salicin 6-phosphate

arbutin-6-phosphate

linamarin

neolinustatin

linustatin

taxiphyllin

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

4-phospho-D-erythronate

D-sedoheptulose 1,7-bisphosphate

L-rhamnulose 1-phosphate

α-D-galactose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-glucopyranose 1-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

D-tagatofuranose 1,6-bisphosphate

β-D-fructose 1,6-bisphosphate

6-deoxy-5-ketofructose 1-phosphate

D-tagatofuranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

N-monoacetylchitobiose 6'-phosphate

sucrose 6^F-phosphate

N,N'-diacetylchitobiose 6'-phosphate

β-D-cellobiose 6'-phosphate

α,α-trehalose 6-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

α-L-rhamnopyranose

β-D-fructofuranose

keto-D-fructose

glycolaldehyde

α-D-xylopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-β-neuraminate

glycerol

D-mannitol 1-phosphate

XXXG xyloglucan oligosaccharide

colanic acid

β-D-cellobiose

maltotriose

(heptosyl)₂-Kdo₂-lipid A

heptosyl-Kdo₂-lipid A

α-Kdo-(2→6)-lipid IV_A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

heptosyl-Kdo₂-lipid IV_A

glucosyl-(heptosyl)₂-Kdo₂-lipid A

glucosyl-(heptosyl)₂-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₂-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₃-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

allolactose

sucrose

α-lactose

α,α-trehalose

maltotetraose

maltohexaose

maltoheptaose

maltopentaose

XLLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

aldehydo-D-galacturonate

salicylaldehyde

4-methylumbelliferone

coumarin

scopoletin

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(3S)-2,3-epoxy-2,3-dihydrosqualene

all-trans-phytoene

15-cis-phytoene

leucodopachrome

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

geranylgeranyl diphosphate

all-trans-heptaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

1-18:1-2-18:1-phosphatidylethanolamine

dioleoyl phosphatidate

1,2-dipalmitoyl-sn-glycero-3-phosphocholine

1-oleoyl-2-lyso-glycerone phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-palmitoyl-sn-glycero-3-phosphocholine

1-oleoyl-sn-glycerol 3-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

hydroquinone

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylacetate

3,4-dihydroxymandelate

dopamine

(R)-adrenaline

(R)-noradrenaline

phytol

propan-1-ol

ethanol

butan-1-ol

methanol

(2E,6E)-farnesal

fluoroacetaldehyde

methylglyoxal

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

phytenal

(S)-lactaldehyde

(R)-lactaldehyde

isobutanal

1-propanal

acetaldehyde

1-octanal

formaldehyde

butan-1-al

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

pyrroloquinoline quinone

menadione

dopaquinone

Reactive Blue 5

diacetyl

acetone

FMN

FMNH₂

FAD

FADH₂

3-demethylubiquinol-8

demethylmenaquinol-13

demethylmenaquinol-12

demethylmenaquinol-11

demethylmenaquinol-10

demethylmenaquinol-6

demethylmenaquinol-9

demethylmenaquinol-7

demethylmenaquinol-8

menaquinol-13

menaquinol-12

menaquinol-11

menaquinol-10

menaquinol-6

menaquinol-9

menaquinol-7

menaquinol-8

ubiquinol-8

(R)-NADHX

(S)-NADHX

glycine betaine

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2E,5Z)-tetradecenoyl-CoA

methylacrylyl-CoA

acetyl-CoA

2-methylacetoacetyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

malonyl-CoA

L-carnitinyl-CoA

γ-butyrobetainyl-CoA

succinyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

3'-dephospho-CoA

itaconyl-CoA

(+)-7-epi-jasmonoyl-CoA

(2S)-methylsuccinyl-CoA

dihomo γ-linolenoyl-CoA

phenylacetyl-CoA

isobutanoyl-CoA

2-methylbutanoyl-CoA

crotonobetainyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxooctadecanoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

octanoyl-CoA

decanoyl-CoA

propanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

pyruvate

2-oxoglutarate

4-(methylsulfanyl)-2-oxobutanoate

2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

glyoxylate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

salicylate

4-aminobenzoate

benzoate

acetate

orotate

L-carnitine

(R)-pantoate

5-chloro-5-deoxy-D-ribonate

fluoroacetate

D-tagaturonate

(S)-1-pyrroline-5-carboxylate

octanoate

palmitate

decanoate

stearate

linoleate

oleate

γ-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

(2E,6E)-farnesoate

formate

propanoate

(R)-lactate

(S)-lactate

(R)-glycerate

(R)-3-hydroxybutanoate

cis-homoaconitate

(2R)-homocitrate

3-carboxy-cis,cis-muconate

cis-aconitate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

chorismate

D-glucarate

D-galactarate

succinate

fumarate

(S)-malate

4-tyrosol

urate

coumarinate

3-amino-4-hydroxybenzaldehyde

3-amino-4-hydroxybenzoate

tyramine

2-phenylethylamine

serotonin

3-acetylamino-4-hydroxybenzaldehyde

3-acetylamino-4-hydroxybenzoate

4-methylphenol

menadiol

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

metanephrine

normetanephrine

preQ₀

propionitrile

acrylonitrile

(indole-3-yl)acetonitrile

3-cyanopyridine

hydrogen cyanide

n-butyronitrile

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

7,8-dihydrolumazine

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

riboflavin

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

hydantoin

cob(I)alamin

adenosylcobalamin

cobyrinate

sirohydrochlorin

precorrin-3B

precorrin-3A

precorrin-8x

precorrin-2

precorrin-4

precorrin-6A

precorrin-6B

precorrin-5

precorrin-1

precorrin-7

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

nicotinamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

(S)-(+)-allantoin

acetamide

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphocholine

(S)-2-chloropropanoate

nicotinate

thiamine

pyridoxal

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine

pyridoxine

4-pyridoxate

coenzyme A

(indol-3-yl)acetate

phenylacetate

(+)-7-epi-jasmonate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

choline sulfate

choline

betaine aldehyde

betaine aldehyde hydrate

agmatine

putrescine

spermidine

N-acetylputrescine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

4-[(E)-2-(methylamino)ethenyl]phenol

4-[(Z)-2-aminoethenyl]phenol

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

superoxide

phosphonate

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

Fe²⁺

Mg²⁺

Co²⁺

Mo²⁺

Mn²⁺

Zn²⁺

Ni²⁺

Cu²⁺

K⁺

H⁺

ammonium

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

taurine

methanesulfonate

dimethyl sulfone

methanesulfinate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

nitric oxide

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

(S)-citramalate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

hydrogen sulfide

oxygen

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

protoporphyrinogen IX

Mg-protoporphyrin

protoporphyrin IX

uroporphyrinogen-III

coproporphyrinogen I

uroporphyrinogen-I

magnesium-protoporphyrin IX 13-monomethyl ester

siroheme

hemin

protoheme

N₂

cob(II)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobinamide

cob(I)inamide

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

cob(II)yrinate c-monoamide

adenosylcobalamin 5'-phosphate

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

cobalt-sirohydrochlorin

cobalt-factor III

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

2-iminobutanoate

2-iminosuccinate

4-[(2Z)-2-(methylimino)ethyl]phenol

4-(2-iminoethyl)phenol