an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

CO₂

enol-phenylpyruvate

prephenate

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

O-acetyl-L-serine

hydrogen selenide

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

quinolinate

glycerone phosphate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

glycolate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

7,8-diaminopelargonate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

8-amino-7-oxononanoate

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphosulfate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

L-β-lysine

(S)-dihydroorotate

S-acetyldihydrolipoamide

dihydrolipoamide

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

hydrogen peroxide

5-phospho-β-D-ribosylamine

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

2-C-methyl-D-erythritol 4-phosphate

succinate semialdehyde

4-imidazoleacetate

imidazole acetaldehyde

5-hydroxyindole acetate

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetaldehyde

propynoate

prop-2-ynal

D-glucurono-6,3-lactone

4-acetamidobutanoate

4-acetamidobutanal

dimethylsulfoniopropanoate

γ-L-glutamyl 5-phosphate

orotidine 5'-phosphate

prenyl diphosphate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

4'-phosphopantetheine

3-deoxy-D-arabino-heptulosonate 7-phosphate

phosphoenolpyruvate

N-acetyl-L-glutamate 5-semialdehyde

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

ammonia

2-maleylacetate

3-oxopropanoate

2-dehydro-3-deoxy-D-galactonate

(R)-pantothenate

acetyl phosphate

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

α-D-glucosamine 1-phosphate

N-(5-phosphoribosyl)-anthranilate

anthranilate

porphobilinogen

3-deoxy-D-manno-octulosonate 8-phosphate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

oxaloacetate

5-enolpyruvoyl-shikimate 3-phosphate

5-hydroxytryptophol

indole-3-glycol aldehyde

indole-3-glycol

isobutanol

3-methylbutanal

3-methylbutanol

2-methylbutanal

2-methylbutanol

2-phenylethanol

2-chloroethanol

1,2-dichloroethane

(1S,4R)-2,4,5-trichloro-2,5-cyclohexadiene-1-diol

(3R,6R)-1,3,4,6-tetrachlorocyclohexa-1,4-diene

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

dethiobiotin

xanthine

histidinol

histidinal

shikimate 3-phosphate

shikimate

3-dehydroshikimate

3-dehydroquinate

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

isopentenyl diphosphate

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

glutathione disulfide

ectoine

(2S)-4-acetamido-2-aminobutanoate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

estrone 3-sulfate

urocanate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

6-deoxyerythronolide B

6-methylsalicylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

3-deoxy-α-D-manno-2-octulosonate

adenosine 3',5'-bisphosphate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

N-carbamoylputrescine

N-acetylglutamyl-phosphate

myosin light-chain phosphate

a [myosin light-chain] L-serine

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

N¹-(5-phospho-β-D-ribosyl)glycinamide

adenosine 5'-phosphoselenate

carbamoyl phosphate

5-amino-6-(D-ribitylamino)uracil

sym-homospermidine

propane-1,3-diamine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-phosphooxy-L-threonine

tartronate semialdehyde

coproporphyrinogen III

3-phosphooxypyruvate

2-oxoglutaramate

L-gulono-1,4-lactone

4-aminobutanoate

thiamine phosphate

oxalosuccinate

L-histidinol phosphate

2-oleoylglycerol

hop-22(29)-ene

squalene

2-dehydropantoate

preuroporphyrinogen

(S)-2,3,4,5-tetrahydrodipicolinate

citrate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

S-Inosyl-L-homocysteine

α-D-galactosyl-diphosphoundecaprenol

carbonic acid

L-canavanine

urea

(S)-ureidoglycolate

lipid A disaccharide (E. coli)

lipid X

lipid IV_A

aminoacetone

arsenite

(2S,3S)-2,3-dihydroxy-5-oxohexanedioate

5-dehydro-4-deoxy-D-glucarate

nicotinate adenine dinucleotide

prephytoene diphosphate

butanoyl phosphate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

(1R,2R)-cyclohexa-3,5-diene-1,2-diol

pimeloyl-CoA

(4-hydroxyphenyl)acetate

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

N-acetyl-D-muramate 6-phosphate

DNA without lesion

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

4-prenylphlorisobutyrophenone

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

nigerose

lanthionine

carbon monoxide

presqualene diphosphate

ethanolamine

ADP-L-glycero-β-D-manno-heptose

methylsalicylate

salicyl alcohol

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

(S)-2-amino-6-oxohexanoate

hydroxylamine

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

acetoacetate

4-fumaryl-acetoacetate

chlorite

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

chlorate

chloroacetaldehyde

1-deoxy-L-glycero-tetrulose 4-phosphate

1,4-dihydroxy-2-naphthoate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

2-amino-3-carboxymuconate-6-semialdehyde

H₂

(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

N⁵-carboxyaminoimidazole ribonucleotide

L-xylo-hex-3-ulono-1,4-lactone

2-iminoacetate

glutathioselenol

selenodiglutathione

isochorismate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

1,4-dihydroxy-2-naphthoyl-CoA

(3S,5S)-3,5-diaminohexanoate

(S)-5-amino-3-oxohexanoate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

5-oxo-L-proline

α-D-galacturonate 1-phosphate

1-piperideine 6-carboxylate

pyruvic oxime

5-hydroxyindole thiazolidine carboxylate

L-dehydro-ascorbate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

bisorganyltrisulfane

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

(2E,6E)-farnesyl diphosphate

pristanate

N-acetyl-β-neuraminate

superoxide

nitric oxide

hydroxyl radical

monodehydroascorbate radical

2-iminosuccinate

2-iminopropanoate

2-iminobutanoate

cyanophycin primer

cyanophycin primer-L-aspartate

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

2-octaprenylphenol

5,10-methenyltetrahydrofolate mono-L-glutamate

1-oleoyl-2-lyso-glycerone phosphate

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

sn-glycerol 1-phosphate

2-chloroacetate

hydrogen sulfide

oxygen

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

Mg-protoporphyrin

protoporphyrin IX

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

magnesium-protoporphyrin IX 13-monomethyl ester

protoheme

(Z,Z)-biliverdin-IX α

hydrogen cyanide

cob(I)alamin

adenosylcobalamin

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

cobyrinate

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-sirohydrochlorin

cobalt-precorrin-3

cobalt-factor III

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

phosphonoacetaldehyde

ethylphosphate

phenylacetate

DNA with lesion

L-homocysteine

4-methylphenol

hypoglycin B

L-α-amino-ε-keto-pimelate

L-lysine

L-arginine

L-histidine

L-glutamate

D-glutamate

glycine

L-alanine

L-glutamine

L-serine

L-leucine

L-proline

β-alanine

L-selenocysteine

L-tryptophan

L-phenylalanine

L-isoleucine

L-valine

L-methionine

L-cysteine

L,L-diaminopimelate

L-aspartate

L-tyrosine

L-cystathionine

L-ornithine

L-aspartyl-4-phosphate

L-threonine

L-asparagine

L-2,4-diaminobutanoate

N-carbamoyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-aspartate

L-citrulline

S-sulfo-L-cysteine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-homoserine

O-succinyl-L-homoserine

hypoglycin A

L-aspartate 4-semialdehyde

O-phospho-L-homoserine

L-glutamate-5-semialdehyde

L-4-hydroxyglutamate semialdehyde

meso-diaminopimelate

L-2-amino-3-oxobutanoate

L-saccharopine

3-phospho-L-serine

O-acetyl-L-homoserine

cis-4-hydroxy-D-proline

trans-4-hydroxy-L-proline

N-acetyl-L-glutamate

N-acetyl-L-methionine

S-methyl-L-methionine

D-alanine

guanosine 2',3'-cyclic monophosphate

adenosine 2',3'-cyclic monophosphate

ADP

ATP

GTP

AMP

adenylo-succinate

GDP

GMP

XMP

guanosine 3'-monophosphate

adenosine 3'-monophosphate

IMP

hypoxanthine

2'-deoxyadenosine

2'-deoxyguanosine

2'-deoxyinosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

dATP

dADP

dGTP

dGDP

ITP

IDP

dITP

dIDP

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

cyclic-AMP

cyclic-GMP

dGMP

dAMP

isoguanine

8-oxo-dGTP

8-oxo-GTP

ADP-α-D-glucose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-glucose

GDP-β-L-fucose

5'-deoxy-5'-fluoroadenosine

NAD⁺

NADP⁺

NADH

NADPH

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-β-L-mycarose

dTDP-D-desosamine

UDP-α-D-galactose

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-mannosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-β-L-iduronate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-α-D-xylose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

preQ₁

guanine

adenine

cytidine-3'-monophosphate

uridine 3'-monophosphate

cyclic di-3',5'-guanylate

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

dCMP

dTMP

dUMP

dCDP

dTDP

dUDP

dCTP

dTTP

dUTP

UDP

CDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

2-hydroxy-dATP

5-hydroxy-CTP

guanosine

adenosine

xanthosine

inosine

cytidine

uridine

D-galactonate

D-gluconate

L-gulonate

aldehydo-L-galactonate

1-(β-D ribofuranosyl)nicotinamide

aldehydo-D-galacturonate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

4-phospho-D-erythronate

L-fuculose 1-phosphate

L-rhamnulose 1-phosphate

α-D-galactose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

glycerol

D-mannitol

L-iditol

D-sorbitol

galactitol

L-arabinitol

β-D-fructofuranose

β-L-rhamnopyranose

α-L-rhamnopyranose

keto-L-sorbose

keto-D-fructose

D-sedoheptulose

D-glyceraldehyde

L-glyceraldehyde

glycolaldehyde

aldehydo-L-arabinose

aldehydo-D-ribose

β-D-ribopyranose

α-D-ribofuranose

β-D-ribofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-mannopyranose

β-D-glucopyranose

α-D-glucopyranose

aldehydo-D-mannose

D-xylulose

keto-L-rhamnulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

(heptosyl)₂-Kdo₂-lipid A

heptosyl-Kdo₂-lipid A

α-Kdo-(2→6)-lipid IV_A

maltotriose

sucrose

maltohexaose

maltotetraose

maltopentaose

maltoheptaose

phlorisovalerophenone

salicylaldehyde

erythronolide B

erythromycin D

3-α-mycarosylerythronolide B

betanidin quinone

betanidin

deoxycohumulone

4-prenylphlorisovalerophenone

deoxyhumulone

(3S)-linalool

(3R)-linalool

geranyl diphosphate

apo-4'-lycopenal

crocetin dialdehyde

15-cis-phytoene

crocetin

apo-4'-lycopenoate

all-trans-retinol

all-trans-retinyl palmitate

(3S)-2,3-epoxy-2,3-dihydrosqualene

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

penicillin N

isopenicillin N

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

1-oleoyl-sn-glycerol

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-nonaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

ethanol

propan-1-ol

phytol

butan-1-ol

methanol

myo-inositol

1-amino-1-deoxy-scyllo-inositol

scyllo-inosose

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

hydroquinone

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycol

catechol

(2E,6E)-farnesal

fluoroacetaldehyde

methylglyoxal

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

phytenal

(S)-lactaldehyde

(R)-lactaldehyde

1-octanal

acetaldehyde

isobutanal

formaldehyde

1-propanal

butan-1-al

diacetyl

4-hydroxyacetophenone

2',4,4',6'-tetrahydroxychalcone

menadione

caldariellaquinone

a coenzyme-A group

3-oxoadipate

octanoate

decanoate

(2E,6E)-farnesoate

acetate

pyruvate

formate

(R)-lactate

(S)-lactate

butanoate

cis-aconitate

D-threo-isocitrate

chorismate

(3E)-2-oxohex-3-enedioate

D-glucarate

D-galactarate

fumarate

succinate

(S)-malate

glyoxylate

2-oxoglutarate

4-(methylsulfanyl)-2-oxobutanoate

2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

4-aminobenzoate

benzoate

orotate

(R)-pantoate

allantoate

fluoroacetate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

palmitate

stearate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

oleate

linoleate

dinor-12-oxo-phytodienoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

γ-linolenate

(3E,5Z)-tetradecadienoate

(15Z)-tetracosenoate

phytenate

4-tyrosol

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-hydroxybenzoate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

urate

menadiol

caldariellaquinol

demethylmenaquinol-7

demethylmenaquinol-6

demethylmenaquinol-8

menaquinol-7

menaquinol-6

menaquinol-8

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

6,7-dehydrobaicalein

baicalein

2,5-dichlorophenol

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

preQ₀

(indole-3-yl)acetonitrile

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

molybdopterin

cyclic pyranopterin phosphate

7,8-dihydroneopterin 2',3'-cyclic phosphate

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-formyl-tetrahydromethanopterin

5,10-methenyltetrahydromethanopterin

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

FAD

FMN

riboflavin

FADH₂

FMNH₂

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

sirohydrochlorin

precorrin-2

precorrin-1

L-ascorbate

nicotinate

nicotinamide

pyridoxal

pyridoxine

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

coenzyme A

(R)-NADHX

(S)-NADHX

α-linolenoyl-CoA

linoleoyl-CoA

acetyl-CoA

succinyl-CoA

malonyl-CoA

isobutanoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

4-hydroxybenzoyl-CoA

3'-dephospho-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

phenylacetyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

(2E,5Z)-tetradecenoyl-CoA

2-methylacetoacetyl-CoA

2-methylbutanoyl-CoA

(S)-3-aminobutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

acetoacetyl-CoA

hexadecanedioyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

octanoyl-CoA

decanoyl-CoA

lauroyl-CoA

hexanoyl-CoA

propanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

cis-dienelactone

trans-dienelactone

L-galactono-1,4-lactone

D-glucono-1,5-lactone

estrone

17β-estradiol

ethene

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3β-hydroxy-4β-methyl-5α-cholest-7-ene-4α-carboxylate

4α-carboxy-4β-methyl-5α-cholesta-8-en-3β-ol

4α-carboxy-5α-cholesta-8-en-3β-ol

4α-carboxy-4β-methyl-5α-cholesta-8,24-dien-3β-ol

4α-carboxy-5α-cholesta-8,24-dien-3β-ol

3-β-hydroxyandrost-5-en-17-one

cholate

glycocholate

isocholate

3-dehydrocholate

4α-methyl-5α-cholest-7-en-3-one

4α-methyl-5α-cholesta-8-en-3-one

5α-cholesta-8-en-3-one

3-dehydro-4-methylzymosterol

zymosterone

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

(S)-(+)-allantoin

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

choline sulfate

choline

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

spermidine

putrescine

spermine

N-acetylputrescine

N¹-acetylspermine

N¹-acetylspermidine

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

perchlorate

molybdate

phosphonate

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

Co²⁺

Fe²⁺

Zn²⁺

Cu²⁺

Mg²⁺

Na⁺

ammonium

H⁺

S-(hydroxymethyl)glutathione

3-dimethylsulfoniopropionaldehyde

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

(2R)-phospho-3-sulfolactate

taurine

3-sulfopyruvate

L-cysteate

(2R)-3-sulfolactate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

methanethiol

S-sulfanylglutathione