an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

2-maleylacetate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

2-phenylethanol

2-methylbutanal

2-methylbutanol

3-methylbutanal

3-methylbutanol

isobutanol

indole-3-glycol aldehyde

indole-3-glycol

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

S-methyl-5-thio-α-D-ribose 1-phosphate

S-methyl-5'-thioadenosine

5-(methylsulfanyl)-ribulose 1-phosphate

N-acetyl-L-glutamate 5-semialdehyde

O-ureido-L-homoserine

carbamoyl phosphate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

L-canavanine

canavaninosuccinate

L-arginino-succinate

CO₂

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

urea

orotidine 5'-phosphate

2-pyrone-4,6-dicarboxylate

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

4-carboxy-2-hydroxymuconate-6-semialdehyde

4-maleyl-acetoacetate

homogentisate

4-fumaryl-acetoacetate

acetoacetate

carbon monoxide

H₂

(2S)-2-isopropylmalate

3-methyl-2-oxobutanoate

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

2-dehydro-3-deoxy-D-gluconate

glycerone phosphate

(E)-glutaconate

methylsalicylate

salicyl alcohol

2-phosphoglycolate

ManNAc-GlcNAc-PP-undecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

acetyl phosphate

2,3-didehydroadipyl-CoA

(E)-4-coumaroyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

2-dehydropantoate

citrate

oxaloacetate

phosphoenolpyruvate

histidinol

histidinal

glycolate

anthranilate

N-(5-phosphoribosyl)-anthranilate

DNA without lesion

L-arogenate

L-histidinol phosphate

imidazole acetol-phosphate

4-hydroxy-2-nonenal

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

5-amino-6-(D-ribitylamino)uracil

3-dehydroshikimate

shikimate

α-D-glucosamine 1-phosphate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

3-phosphooxypyruvate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

prenyl diphosphate

isopentenyl diphosphate

O-acetyl-L-serine

hydrogen selenide

3'-phosphoadenylyl-sulfate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

preuroporphyrinogen

ADP-L-glycero-β-D-manno-heptose

ADP-D-glycero-β-D-manno-heptose

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

cis,cis-muconate

(+)-muconolactone

muconolactone

propionamide

(indol-3-yl)acetamide

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

oxalosuccinate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-C-methyl-D-erythritol 4-phosphate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

(2E,4Z)-2-hydroxymuconate

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

5-carboxymethyl-2-hydroxymuconate

(4S)-4-hydroxy-2-oxoheptanedioate

ethanolamine

coproporphyrinogen III

prephytoene diphosphate

presqualene diphosphate

squalene

hydrogen peroxide

phosphonoacetate

6-carboxyhex-2-enoyl-CoA

pimeloyl-CoA

prephenate

3-deoxy-α-D-manno-2-octulosonate

nigerose

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

glutathione disulfide

L-gulono-1,4-lactone

(E)-3-(methoxycarbonyl)pent-2-enedioate

thiamine phosphate

2-iminoacetate

ethylamine

N-ethylglycine

methylamine

N-Formyl-L-kynurenine

arsenite

(R)-2,3-dihydroxy-3-methylpentanoate

3-oxopropanoate

3-hydroxypropanoate

5-methylsalicylate

4-methylsalicylate

4-pyridoxolactone

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

2,5-didehydro-D-gluconate

2-keto-D-gluconate

(R)-pantothenate

(S)-dihydroorotate

5-phospho-β-D-ribosylamine

4-amino-4-deoxychorismate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

6-aminohexanoate linear dimer

6-aminohexanoate cyclic dimer

8-amino-7-oxononanoate

dethiobiotin

7,8-diaminopelargonate

(S)-2-amino-6-oxohexanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

lipid A disaccharide (E. coli)

lipid X

3-deoxy-D-manno-octulosonate 8-phosphate

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

butyramide

1-deoxy-L-glycero-tetrulose 4-phosphate

porphobilinogen

5-aminolevulinate

urea-1-carboxylate

4'-phosphopantetheine

L-selenocystathionine

N-acetylphosphinothricin tripeptide

N-acetyldemethylphosphinothricin tripeptide

N-acetylglutamyl-phosphate

N-acetyl-D-muramate 6-phosphate

formamide

succinate semialdehyde

4-aminobutanoate

benzoylsuccinyl-CoA

xanthine

4-acetamidobutanoate

4-acetamidobutanal

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

cyanate

α-ribazole 5'-phosphate

α-ribazole

β-nicotinate D-ribonucleotide

5,6-dimethylbenzimidazole

nicotinate adenine dinucleotide

2-oleoylglycerol

S-formylglutathione

oxalate

6-aminohexanoate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

2-hydroxy-3-oxosuccinate

meso-tartrate

L-tartrate

cis-coumarinic acid-β-D-glucoside

scopolin

4-hydroxybenzaldehyde

4-methylumbelliferyl glucoside

2-hydroxy-5-carboxymethylmuconate semialdehyde

phenylglyoxylate

2-(4-hydroxyphenyl)-2-oxoacetate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

coenzyme F₃₉₀-A

1-piperideine 6-carboxylate

4-oxoglutaramate

(2E)-2-hydroxypenta-2,4-dienoate

(3E)-2-oxopent-3-enoate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

4-oxalocrotonate

ammonia

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

3-methyl-2-butenal

5-enolpyruvoyl-shikimate 3-phosphate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

lipid IV_A

(L-threonylcarbamoyl)adenylate

quinolinate

phthalate 4,5-cis-dihydrodiol

phthalate

β-D-ribosylnicotinate

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

sym-homospermidine

propane-1,3-diamine

carbonic acid

hydroxypyruvate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

2-keto-L-gulonate

5-phospho-α-D-ribose 1,2-cyclic phosphate

α-D-ribose-1-methylphosphonate 5-phosphate

cis-3,4-dehydroadipyl-CoA semialdehyde

2,3-epoxy-2,3-dihydrobenzoyl-CoA

cyclohex-1,5-diene-1-carbonyl-CoA

2-ketocyclohexane-1-carbonyl-CoA

2-hydroxy-cyclohexane-1-carbonyl-CoA

cyclohex-1-ene-1-carbonyl-CoA

cyclohexane-1-carbonyl-CoA

cyclohexane-1-carboxylate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-L,L-2,6-diaminopimelate

(S)-ureidoglycolate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

shikimate 3-phosphate

creatinine

(R)-4'-phosphopantothenate

D-erythro-imidazole-glycerol-phosphate

(2R,3S)-3-methylmalate

citraconate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

itaconate

γ-L-glutamyl 5-phosphate

(R)-4-phosphopantoate

(R)-4'-phosphopantothenoyl-L-cysteine

(2-hydroxyphenyl)acetate

N⁵-carboxyaminoimidazole ribonucleotide

2-amino-3-carboxymuconate-6-semialdehyde

butanoyl phosphate

dialurate

urocanate

4-imidazolone-5-propanoate

trans-2,3-dehydroadipyl-coA

3,6-lactone of 3-hydroxyadinyl-CoA

cis-3,4-dehydroadipyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-hydroxypimeloyl-CoA

3-oxopimeloyl-CoA

crotonate

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

(R)-1-amino-2-propanol O-2-phosphate

glutathioselenol

selenodiglutathione

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

2-oxopent-4-enoate

(S)-4-amino-5-oxopentanoate

vanillin

adipate

6-oxohexanoate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

4-amino-2-methyl-5-pyrimidinemethanol

2-dehydro-3-deoxy-D-gluconate 6-phosphate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

3-hydroxy-2-methylpyridine-5-carboxylate

(2Z)-2-(acetamidomethylene)succinate

protoanemonin

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

2-dehydro-6-phospho-D-gluconate

L-xylo-hex-3-ulono-1,4-lactone

D-glycero-β-D-manno-heptose 1-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

core oligosaccharide-lipid A (E. coli K-12 core type)

autoinducer 2

S-ribosyl-L-homocysteine

5-oxo-L-proline

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

γ-butyrobetaine

α-D-galacturonate 1-phosphate

L-dehydro-ascorbate

(2E,6E)-farnesyl diphosphate

pristanate

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-homocysteine

4-methylphenol

2-iminopropanoate

2-iminobutanoate

2-iminosuccinate

hypoglycin B

carbamate

L-α-amino-ε-keto-pimelate

L-isoleucine

L-valine

L-leucine

L-proline

L-phenylalanine

L-selenocysteine

glycine

L-alanine

L-tryptophan

L-methionine

L-cysteine

L-glutamate

L-ornithine

L-arginine

L-lysine

L-glutamine

L-histidine

L-tyrosine

L-aspartate

L-serine

L-threonine

L-cystathionine

L-isoglutamine

L,L-diaminopimelate

L-aspartyl-4-phosphate

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

L-citrulline

L-canaline

O-succinyl-L-homoserine

L-homoserine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

hypoglycin A

O-phospho-L-homoserine

S-sulfo-L-cysteine

L-aspartate 4-semialdehyde

L-cystine

L-glutamate-5-semialdehyde

L-4-hydroxyglutamate semialdehyde

L-allo-threonine

meso-diaminopimelate

L-selenomethionine

seleno-L-homocysteine

S-sulfanyl-L-cysteine

3-phospho-L-serine

O-acetyl-L-homoserine

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

S-methyl-L-methionine

D-alanine

D-glutamate

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

AMP

ATP

ADP

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

GDP

GTP

GMP

IMP

adenylo-succinate

dGDP

dGTP

dADP

dATP

cyclic-GMP

5'-deoxyadenosine

dITP

dIDP

ITP

IDP

2'-deoxyguanosine

8-oxo-dGMP

8-oxo-dGTP

ppGpp

pppGpp

cyclic-AMP

XMP

hypoxanthine

isoguanine

8-oxo-GMP

8-oxo-GTP

2'-deoxyadenosine

dGMP

dAMP

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

CDP-4-dehydro-6-deoxy-α-D-glucose

ADP-α-D-glucose

GDP-α-D-glucose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

CDP-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

UDP-α-D-glucose

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-galactose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

adenine

guanine

thymine

uracil

cytosine

preQ₁

N¹-ethyladenine

N3-methylcytosine

N¹-methyladenine

NAD⁺

NADP⁺

NADH

NADPH

cyclic di-3',5'-guanylate

dTMP

dUMP

dCMP

dUDP

dCDP

dTDP

dUTP

dCTP

dTTP

UDP

CDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

5-hydroxy-CTP

2-hydroxy-dATP

thymidine

2'-deoxyuridine

2'-deoxycytidine

adenosine

guanosine

inosine

xanthosine

uridine

cytidine

L-gulonate

D-gluconate

aldehydo-L-galactonate

1-(β-D ribofuranosyl)nicotinamide

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

lotaustralin

linamarin

neolinustatin

linustatin

taxiphyllin

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 1,7-bisphosphate

4-phospho-D-erythronate

L-fuculose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

6-deoxy-5-ketofructose 1-phosphate

D-fructose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

4-deoxy-L-threo-hex-4-enopyranuronate

β-D-fructofuranose

keto-L-sorbose

glycolaldehyde

aldehydo-L-arabinose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

L-sorbosone

D-glyceraldehyde

L-glyceraldehyde

D-ribulose

L-sorbosone 2,6-lactone

L-sorbosone 1,4-lactone

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

glycerol

galactitol

D-sorbitol

L-arabinitol

D-ribitol

β-D-cellobiose

maltotriose

heptosyl-Kdo₂-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

heptosyl-Kdo₂-lipid A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

(heptosyl)₂-Kdo₂-lipid A

α-Kdo-(2→6)-lipid IV_A

glucosyl-(heptosyl)₂-Kdo₂-lipid A

glucosyl-(heptosyl)₂-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₂-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₃-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

melibiose

sucrose

α,α-trehalose

maltotetraose

maltohexaose

maltoheptaose

maltopentaose

aldehydo-D-galacturonate

salicylaldehyde

4-methylumbelliferone

scopoletin

coumarin

phytyl diphosphate

all-trans-retinol

all-trans-retinyl palmitate

(3S)-2,3-epoxy-2,3-dihydrosqualene

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

apo-4'-lycopenal

torulene

4'-apo-β-carotenal

all-trans-phytoene

15-cis-phytoene

all-trans-3,4-didehydrolycopene

apo-4'-lycopenoate

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

4-trans-undecenoyl-CoA

4-cis-undecenoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

geranylgeranyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

dioleoyl phosphatidate

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

hydroxyquinol

myo-inositol

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

protocatechuate

3-sulfocatechol

4-methylcatechol

3-methylcatechol

catechol

4-chlorocatechol

3,4-dihydroxyphenylacetate

phytol

propan-1-ol

ethanol

butan-1-ol

methanol

3-(N-morpholino)propanal

methylglyoxal

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

phytenal

(S)-lactaldehyde

isobutanal

1-propanal

acetaldehyde

formaldehyde

butan-1-al

1-octanal

menadione

diacetyl

a coenzyme-A group

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

pyruvate

2-oxoglutarate

glyoxylate

2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

5-chloroprotocatechuate

salicylate

vanillate

4-aminobenzoate

benzoate

acetate

L-carnitine

orotate

(R)-pantoate

5-chloro-5-deoxy-D-ribonate

allantoate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

palmitate

decanoate

octanoate

butanoate

stearate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

linoleate

oleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

γ-linolenate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

3-oxoadipate

formate

propanoate

(S)-lactate

(R)-lactate

4-hydroxybutanoate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(2R,3S)-2-methylisocitrate

(R)-2-hydroxyglutarate

(R)-3-hydroxybutanoate

(2R)-homocitrate

trans-aconitate

(2S,3S)-2-methylcitrate

cis-homoaconitate

cis-2-methylaconitate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

chorismate

(3E)-2-oxohex-3-enedioate

succinate

fumarate

(S)-malate

4-tyrosol

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-hydroxybenzoate

ferulate

coumarinate

5-chlorosalicylate

4-chlorosalicylate

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

3-demethylubiquinol-8

3-demethylubiquinol-9

3-demethylubiquinol-7

3-demethylubiquinol-10

demethylmenaquinol-8

menaquinol-8

ubiquinol-8

ubiquinol-9

ubiquinol-7

ubiquinol-10

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

(indole-3-yl)acetonitrile

hydrogen cyanide

preQ₀

propionitrile

acrylonitrile

3-cyanopyridine

n-butyronitrile

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

molybdopterin

cyclic pyranopterin phosphate

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-phosphate

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

riboflavin

FMN

FAD

reduced riboflavin

FMNH₂

FADH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

cob(I)alamin

adenosylcobalamin

methylcob(III)alamin

cob(II)alamin

cobyrinate

sirohydrochlorin

precorrin-6A

precorrin-5

precorrin-8x

precorrin-3A

precorrin-2

precorrin-4

precorrin-3B

cobalt-precorrin-6A

cobalt-precorrin-6B

precorrin-7

precorrin-6B

precorrin-1

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-5B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

nicotinate

nicotinamide

L-ascorbate

pyridoxal

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxine

4-pyridoxate

coenzyme A

oxidized coenzyme F₄₂₀-2

(R)-NADHX

(S)-NADHX

glycine betaine

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

L-galactono-1,4-lactone

L-carnitinyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

acetyl-CoA

(R)-2-hydroxyglutaryl-CoA

(E)-glutaconyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

succinyl-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

(2E,5Z)-tetradecenoyl-CoA

methylacrylyl-CoA

4-hydroxybutanoyl-CoA

2-methylacetoacetyl-CoA

phenylacetyl-CoA

4-hydroxybenzoyl-CoA

3-hydroxypropanoyl-CoA

malonyl-CoA

isobutanoyl-CoA

3'-dephospho-CoA

oxalyl-CoA

formyl-CoA

trans-feruloyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

glutaryl-CoA

benzoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

dihomo γ-linolenoyl-CoA

(3S)-citryl-CoA

itaconyl-CoA

acryloyl-CoA

2-methylbutanoyl-CoA

γ-butyrobetainyl-CoA

crotonobetainyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

3-oxooctadecanoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

hexadecanedioyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

decanoyl-CoA

octanoyl-CoA

hexanoyl-CoA

lauroyl-CoA

propanoyl-CoA

butanoyl-CoA

cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

2-carboxy-cerotoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

phenylacetate

(+)-7-epi-jasmonate

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

cholate

glycocholate

isocholate

3-dehydrocholate

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

methane

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(S)-(+)-allantoin

6-caprolactam

acetamide

2-chloroacetate

3-chloro-cis,cis-muconate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

betaine aldehyde

betaine aldehyde hydrate

choline

putrescine

spermidine

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

hydrogensulfite

hydrogencarbonate

molybdate

superoxide

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

Fe²⁺

Mg²⁺

Co²⁺

ammonium

H⁺

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

3-(N-morpholino)propanesulfonate

isethionate

1-butanesulfonate

methanesulfonate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

methanethiol

S-sulfanylglutathione

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

nitric oxide

monodehydroascorbate radical

hydroxyl radical

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(R)-citramalate

(S)-ureidoglycine

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(2R)-2,3-dihydroxy-3-methylbutanoate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

S⁰

oxygen

hydrogen sulfide

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

uroporphyrinogen-III

protoporphyrinogen IX

magnesium-protoporphyrin IX 13-monomethyl ester

Mg-protoporphyrin

protoporphyrin IX

coproporphyrinogen I

uroporphyrinogen-I

protoheme

(Z,Z)-biliverdin-IX α

N₂

nitrous oxide

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

adenosylcobinamide

cob(I)inamide

cob(I)yrinate a,c-diamide

adenosyl-cobinamide phosphate

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

cobalt-sirohydrochlorin

cobalt-factor III

carboxyphosphinopyruvate

1-carboxyvinyl carboxyphosphonate

3-(hydroxyphosphinoyl)pyruvate

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

geranyl diphosphate

hydroxysqualene