an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

enol-phenylpyruvate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

bisorganyltrisulfane

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

1-pyrroline

4-oxoglutaramate

(4-hydroxyphenyl)acetate

L-dehydro-ascorbate

α-D-galacturonate 1-phosphate

2-hydroxy-1,4-benzoquinone

L-xylo-hex-3-ulono-1,4-lactone

dethiobiotin

(2Z)-2-(acetamidomethylene)succinate

3-hydroxy-2-methylpyridine-5-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

ammonia

selenodiglutathione

glutathioselenol

N-carbamoyl-2-oxoglycine

oxamate

6-aminohexanoate

6-oxohexanoate

adipate

pseudouridine

3'-ketosucrose

2-amino-3-carboxymuconate-6-semialdehyde

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

mercuriphenyl acetate

propan-2-ol

theophylline

1,3-dimethylurate

3-methylxanthine

3-methylurate

1-methylxanthine

1-methylurate

creatinine

N-methylhydantoin

4-amino-2-methyl-5-pyrimidinemethanol

5-dehydro-2-deoxy-D-gluconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

N-ethylammelide

γ-butyrobetaine

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

dialurate

1,4-dihydroxy-2-naphthoyl-CoA

1,4-dihydroxy-2-naphthoate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

isochorismate

2-dehydro-6-phospho-D-gluconate

butanoyl phosphate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

estrone 3-sulfate

formamide

carboxynorspermidine

norspermidine

2-iminoacetate

(2-hydroxyphenyl)acetate

4-methyl-3-oxoadipate-enol-lactone

α-D-ribose-1-methylphosphonate 5-phosphate

5-phospho-α-D-ribose 1,2-cyclic phosphate

(R)-6-hydroxynicotine

N6'-acetylkanamycin-B

phosphonoacetate

salicyl alcohol

methylsalicylate

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(S)-mandelate

(R)-mandelate

oxalate

autoinducer 2

(4S)-4-hydroxy-5-phosphooxypentane-2,3-dione

2-oxoglutaramate

α-D-galactosyl-diphosphoundecaprenol

pyrazine-2-carboxylate

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

arsenite

DNA without lesion

α-D-glucopyranosyl-diphosphoundecaprenol

chloramphenicol

ethanolamine

prephytoene diphosphate

N-ethylmaleimide

N-ethylsuccinimide

1,6-anhydro-N-acetyl-β-muramate

α-ribazole

2-keto-L-gulonate

(5S)-5-benzyl-hydantoin

(5R)-5-benzyl-hydantoin

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

N-(4-aminobenzoyl)-L-glutamate

deethylsimazine

N-ethylammeline

4-amino-4-deoxychorismate

propane-1,3-diamine

sym-homospermidine

hydrogenobyrinate

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

5-(methylsulfanyl)-ribulose 1-phosphate

5-(methylsulfanyl)-α-D-ribose

S-methyl-5-thio-α-D-ribose 1-phosphate

3-hydroxypropanoate

3-keto-β-D-galactose

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-imidazolone-5-propanoate

(S)-5-hydroxyisourate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

3'-phosphoadenylyl-sulfate

(S)-ureidoglycolate

N-acetyl-D-muramate 6-phosphate

2-amino-2-deoxy-D-gluconate 6-phosphate

N-succinyl-L,L-2,6-diaminopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

6-phospho D-glucono-1,5-lactone

acetoacetate

lipid IV_A

(E)-3-(methoxycarbonyl)pent-2-enedioate

adenosine 3',5'-bisphosphate

quinolinate

5-phospho-β-D-ribosylamine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

(S)-dihydroorotate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

S-formylglutathione

3-deoxy-D-manno-octulosonate 8-phosphate

isopentenyl diphosphate

lipid X

lipid A disaccharide (E. coli)

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

oxalosuccinate

glutathione disulfide

2-phosphoglycolate

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

D-gluconate 6-phosphate

(R)-1-amino-2-propanol O-2-phosphate

2-oxoadipate

butyramide

prenyl diphosphate

2-dehydropantoate

5-amino-6-(D-ribitylamino)uracil

D-erythritol 4-phosphate

3-dehydrocarnitine

4-aminobutanoate

anthranilate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

3-ureidopropanoate

dihydroxyacetone

3-demethylubiquinol-6

L-arogenate

hydrogenobyrinate a,c-diamide

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

indole-3-ethanol

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

3-phosphooxypyruvate

α-D-glucosamine 1-phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N⁵-carboxyaminoimidazole ribonucleotide

β-D-ribosylnicotinate

cis-coumarinic acid-β-D-glucoside

scopolin

4-hydroxybenzaldehyde

4-methylumbelliferyl glucoside

4-fumaryl-acetoacetate

homogentisate

4-maleyl-acetoacetate

2-C-methyl-D-erythritol 4-phosphate

carbon monoxide

L-canavanine

urea

porphobilinogen

preuroporphyrinogen

propionamide

(indol-3-yl)acetamide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

γ-L-glutamyl 5-phosphate

β-nicotinate D-ribonucleotide

nicotinate adenine dinucleotide

(2S)-2-isopropylmalate

2-isopropylmaleate

O-ureido-L-homoserine

canavaninosuccinate

L-arginino-succinate

citrate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

3-oxopropanoate

1,5-anhydro-D-fructose

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

shikimate

3-dehydroshikimate

2-dehydro-3-deoxy-D-gluconate

N-(5-phosphoribosyl)-anthranilate

(R)-pantothenate

(R)-4'-phosphopantothenate

D-erythro-imidazole-glycerol-phosphate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

4-methyl-2-oxopentanoate

3-deoxy-α-D-manno-2-octulosonate

prephenate

pseudouridine 5'-phosphate

phosphoenolpyruvate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

S-ribosyl-L-homocysteine

orotidine 5'-phosphate

hydrogen selenide

O-acetyl-L-serine

(R)-4'-phosphopantothenoyl-L-cysteine

4'-phosphopantetheine

2,3-didehydroadipyl-CoA

(E)-4-coumaroyl-CoA

5-methylcytosine

xanthine

urocanate

imidazole acetol-phosphate

L-histidinol phosphate

histidinal

histidinol

4-methylbenzyl alcohol

3-methylbenzyl alcohol

3-methylbenzaldehyde

5-dehydro-D-gluconate

5-oxo-L-proline

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

oxaloacetate

(S)-4-amino-5-oxopentanoate

6-aminohexanoate cyclic dimer

6-aminohexanoate linear dimer

L-selenocystathionine

carbamoyl phosphate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

H₂

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

coproporphyrinogen III

2-phenylethanol

2-methylbutanol

2-methylbutanal

3-methylbutanol

3-methylbutanal

isobutanol

indole-3-glycol

indole-3-glycol aldehyde

5-hydroxytryptophol

4-pyridoxolactone

2-keto-D-gluconate

2,5-didehydro-D-gluconate

aminoacetone

2,5-dioxopentanoate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

(+)-muconolactone

muconolactone

cis,cis-muconate

isoquinoline

isoquinolin-2(1H)-one

4-hydroxy-2-nonenal

phthalate

phthalate 4,5-cis-dihydrodiol

meso-tartrate

L-tartrate

2-hydroxy-3-oxosuccinate

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

5-aminolevulinate

2,3,5,6-tetracholorophenol

acetyl phosphate

dimethylamine

tartronate semialdehyde

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

dimethylsulfoniopropanoate

4-acetamidobutanal

4-acetamidobutanoate

D-glucurono-6,3-lactone

prop-2-ynal

propynoate

3,4-dihydroxyphenylacetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxyindole acetate

imidazole acetaldehyde

4-imidazoleacetate

3-deoxy-D-glycero-2,5-hexodiulosonate

L-gulono-1,4-lactone

glycolate

2-dehydro-3-deoxy-D-galactonate

5-dehydro-4-deoxy-D-glucarate

carbonic acid

selenophosphate

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

glycerone phosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

hydrogen peroxide

succinate semialdehyde

2-maleylacetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate

dihydrolipoamide

S-acetyldihydrolipoamide

hydroxypyruvate

H₂O

CO₂

S-methyl-5'-thioadenosine

(2E,6E)-farnesol

(2E,6E)-farnesyl diphosphate

pristanate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

superoxide

monodehydroascorbate radical

hydroxyl radical

nitric oxide

chloramphenicol 3-acetate

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

N-acetyl-β-neuraminate

S-(hydroxymethyl)glutathione

dimethyl sulfide

methionol

3-(methylsulfanyl)propanal

3-dimethylsulfoniopropionaldehyde

glutathione

thiocyanate

methanethiol

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

taurine

L-cysteate

3-sulfopyruvate

sulfoacetaldehyde

(R)-S-lactoylglutathione

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

chloride

phosphonate

phosphate

triphosphate

diphosphate

Fe³⁺

ammonium

H⁺

K⁺

Ni²⁺

Cu²⁺

Cd²⁺

Fe²⁺

Co²⁺

Hg²⁺

glycine betaine

betaine aldehyde

choline

choline sulfate

betaine aldehyde hydrate

(2Z)-2-aminobut-2-enoate

2-iminopropanoate

2-aminoprop-2-enoate

agmatine

4-aminobutanal

putrescine

spermidine

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

sn-glycero-3-phosphocholine

fluoroacetaldehyde

fluoroacetate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5-chlorohydroxyquinol

5-chlorohydroxyquinone

2,5-dichloro-p-quinol

2,5-dichloro-p-quinone

2-chloromaleylacetate

2-chloroacetate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

2,4,5-trichloro-phenoxyacetate

2,4,5-trichlorophenol

3-chlorobenzyl alcohol

3-chlorobenzaldehyde

pentachlorophenol

allantoate

acetamide

6-caprolactam

(S)-(+)-allantoin

pyrazinamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

L-proline amide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

(S)-piperazine-2-carboxamide

nicotinamide

methane

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

estrone

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

3-β-hydroxyandrost-5-en-17-one

(+)-7-epi-jasmonate

phenylacetate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

γ-butyrobetainyl-CoA

acryloyl-CoA

phenylacetyl-CoA

(2E,5Z)-tetradecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

formyl-CoA

oxalyl-CoA

L-carnitinyl-CoA

crotonobetainyl-CoA

dihomo γ-linolenoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-hydroxypropanoyl-CoA

(E)-glutaconyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

isovaleryl-CoA

isobutanoyl-CoA

2-methylbutanoyl-CoA

(3S)-citryl-CoA

3'-dephospho-CoA

malonyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

methylacrylyl-CoA

2-methylacetoacetyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

succinyl-CoA

(2S)-methylsuccinyl-CoA

acetyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-octadec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(S)-malyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

decanoyl-CoA

octanoyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxooctadecanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

all-trans-retinyl palmitate

L-galactono-1,4-lactone

cis-dienelactone

trans-dienelactone

D-galactono-1,4-lactone

D-glucono-1,5-lactone

FMNH₂

FMN

FADH₂

FAD

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

ubiquinol-10

ubiquinol-7

ubiquinol-6

ubiquinol-8

ubiquinol-9

menaquinol-13

menaquinol-12

menaquinol-11

menaquinol-10

menaquinol-6

menaquinol-9

menaquinol-7

menaquinol-8

demethylmenaquinol-13

demethylmenaquinol-12

demethylmenaquinol-11

demethylmenaquinol-10

demethylmenaquinol-6

demethylmenaquinol-9

demethylmenaquinol-7

demethylmenaquinol-8

3-demethylubiquinol-10

3-demethylubiquinol-7

3-demethylubiquinol-8

3-demethylubiquinol-9

coenzyme A

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

L-ascorbate

thiamine

nicotinate

riboflavin

4-pyridoxate

pyridoxamine

pyridoxine

pyridoxal

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

L-carnitine

menadione

all-trans-retinol

(S)-1-pyrroline-5-carboxylate

adenosylcobalamin

cob(I)alamin

cobalt-precorrin-3

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

cobalt-precorrin-4

cobalt-precorrin-5A

precorrin-1

precorrin-7

precorrin-8x

precorrin-6B

precorrin-4

precorrin-2

precorrin-3A

precorrin-3B

precorrin-5

precorrin-6A

sirohydrochlorin

cobyrinate

hydantoin

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

guanine

adenine

2'-deoxyguanosine

2'-deoxyadenosine

2'-deoxyinosine

xanthosine

guanosine

adenosine

inosine

hypoxanthine

dGMP

dAMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

IMP

XMP

GMP

AMP

ITP

GTP

ATP

CMP-N-acetyl-β-neuraminate

orotate

dTTP

dCTP

dUDP

dTDP

uridine 3'-monophosphate

cytidine-3'-monophosphate

dTMP

5,6-dihydrothymine

5,6-dihydrouracil

UTP

CTP

dCMP

dCDP

CDP

dUTP

dUMP

cytosine

uracil

UDP

UDP-α-D-galacturonate

UDP-α-D-galactofuranose

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-galactose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-glucuronate

UDP-β-L-iduronate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-sulfoquinovopyranose

UDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

UDP-α-D-xylose

dTDP-α-D-glucose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

CDP-4-dehydro-6-deoxy-α-D-glucose

CDP-α-D-paratose

CDP-α-tyvelose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

5-fluorouracil

cytidine

uridine

2'-deoxycytidine

2'-deoxyuridine

thymidine

thymine

CMP

UMP

isoguanine

N¹-methyladenine

N3-methylcytosine

N¹-ethyladenine

preQ₁

coumarin

scopoletin

4-methylumbelliferone

preQ₀

(indole-3-yl)acetonitrile

propionitrile

3-cyanopyridine

acrylonitrile

neolinustatin

lotaustralin

linustatin

linamarin

taxiphyllin

hydrogen cyanide

2-hydroxy-2-methylpropanenitrile

(2R)-2-hydroxy-2-methylbutanenitrile

n-butyronitrile

salicylaldehyde

benzene

3-hydroxy-1-(4-hydroxy-3-methoxyphenyl)propan-1-one

(2S)-2-(glutathion-S-yl)-3-hydroxy-1-(4-hydroxy-3-methoxyphenyl)propan-1-one

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

(2R)-2-(glutathion-S-yl)-3-hydroxy-1-(4-hydroxy-3-methoxyphenyl)propan-1-one

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

urate

benzyl alcohol

4-tyrosol

(2S)-3-hydroxy-1-(4-hydroxy-3-methoxyphenyl)-2-(2-methoxyphenoxy)propan-1-one

(2R)-3-hydroxy-1-(4-hydroxy-3-methoxyphenyl)-2-(2-methoxyphenoxy)propan-1-one

(+)-(αS,βS)-guaiacylglycerol-β-guaiacyl ether

(-)-(αR,βR)-guaiacylglycerol-β-guaiacyl ether

(-)-(αS,βR)-guaiacylglycerol-β-guaiacyl ether

(+)-(αR,βS)-guaiacylglycerol-β-guaiacyl ether

guaiacol

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

4-methylbenzaldehyde

benzaldehyde

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

2,6-dichlorohydroquinone

2,3,6-trichlorohydroquinone

hydroquinone

menadiol

2,3,5,6-tetrachlorohydroquinone

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

4-aminophenol

4-methylphenol

catechol

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxymandelate

protocatechuate

coumarinate

salicylate

4-aminobenzoate

benzoate

4-methylbenzoate

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

L-cysteine

L-asparagine

L-tyrosine

L-glutamine

L-threonine

L-serine

glycine

L-lysine

L-histidine

L-arginine

L-aspartate

L-glutamate

L-tryptophan

L-phenylalanine

D-serine

D-aspartate

cis-4-hydroxy-D-proline

D-glutamate

D-alanine

D-threonine

2-hydroxy-5-oxoproline

L-aspartyl-4-phosphate

seleno-L-homocysteine

L-2-amino-3-oxobutanoate

sarcosine

N⁶,N⁶-dimethyl-L-arginine

N-carbamoylglycine

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

L-threonine 3-O-phosphate

3-phospho-L-serine

L-citrulline

hypoglycin A

L-canaline

L-glutamate-5-semialdehyde

L-homoserine

L-aspartate 4-semialdehyde

O-succinyl-L-homoserine

S-sulfo-L-cysteine

O-phospho-L-homoserine

L-homocysteine

S-adenosyl-L-homocysteine

L-ornithine

S-adenosyl-L-methionine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

D-allothreonine

L-methionine

L-valine

L-leucine

L-isoleucine

L-alanine

L-proline

L-isoglutamine

L-2,4-diaminobutanoate

L,L-diaminopimelate

L-cystathionine

creatine

N-carbamoylsarcosine

β-alanine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

crocetin

chorismate

fumarate

succinate

(S)-malate

D-glucarate

3-(carbamoylamino)-2-methylpropanoate

(2R,3S)-2-methylisocitrate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

trans-aconitate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

(R)-3-hydroxybutanoate

(S)-lactate

(R)-lactate

(R)-glycerate

pyruvate

acetate

formate

propanoate

butanoate

decanoate

octanoate

(2E,6E)-farnesoate

3-oxoadipate

(15Z)-tetracosenoate

oleate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(3E,5Z)-tetradecadienoate

γ-linolenate

di-homo-γ-linolenate

linoleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

apo-4'-lycopenoate

phytenate

stearate

palmitate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

dinor-12-oxo-phytodienoate

5-deoxy-D-glucuronate

D-mannonate

(R)-pantoate

(S)-piperazine-2-carboxylate

D-gluconate

D-tagaturonate

aldehydo-D-glucuronate

aldehydo-D-galacturonate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

2-oxobutanoate

2-oxoglutarate

glyoxylate

L-malic semialdehyde

methylglyoxal

diacetyl

6-hydroxypseudooxynicotine

acetone

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

crocetin dialdehyde

glycolaldehyde

(2E,6E)-farnesal

butan-1-al

isobutanal

1-propanal

formaldehyde

1-octanal

acetaldehyde

(R)-lactaldehyde

(S)-lactaldehyde

phytenal

L-glyceraldehyde

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-ribopyranose

β-D-galactopyranose

α-D-galactopyranose

L-sorbosone

α-L-rhamnopyranose

β-L-rhamnopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

hydroxyquinol

butan-1-ol

propan-1-ol

ethanol

methanol

phytol

glycerol

erythritol

xylitol

galactitol

D-mannitol

D-sorbitol

L-iditol

galactitol 1-phosphate

ethylene glycol

1D-chiro-inositol

scyllo-inositol

myo-inositol

1-keto-D-chiro-inositol

1-amino-1-deoxy-scyllo-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

scyllo-inosose

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

1-oleoyl-2-lyso-glycerone phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

dioleoyl phosphatidate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

geranyl diphosphate

geranylgeranyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

apo-4'-lycopenal

15-cis-phytoene

all-trans-phytoene

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

kanamycin B

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

XLLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

raffinose

maltotriose

stachyose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

α-maltose

melibiose

sucrose

α,α-trehalose

α-lactose

β-D-cellobiose

1,5-anhydro-D-mannitol

keto-L-sorbose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

L-sorbosone 1,4-lactone

L-sorbosone 2,6-lactone

β-D-fructofuranose

L-xylulose

D-xylulose

D-ribulose

L-ribulose

3-dehydro-D-glucopyranose

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

N-monoacetylchitobiose 6'-phosphate

N,N'-diacetylchitobiose 6'-phosphate

α,α-trehalose 6-phosphate

β-D-cellobiose 6'-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

GDP-α-D-glucose

ADP-α-D-glucose

GDP-α-D-mannose

L-glyceraldehyde 3-phosphate

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

D-sedoheptulose 1,7-bisphosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

β-D-fructose 1,6-bisphosphate

arbutin-6-phosphate

salicin 6-phosphate

D-fructose 6-phosphate

keto-L-tagatose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

L-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

L-fuculose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

methyl β-D-glucoside 6-phosphate

aldehydo-L-galactonate

D-altronate

L-idonate

L-gulonate

D-galactonate

8-oxo-GTP

8-oxo-dGTP

cyclic-GMP

pppGpp

ppGpp

adenosine 3'-monophosphate

guanosine 3'-monophosphate

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

cyclic-AMP

5'-deoxyadenosine

5-fluorocytosine

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

hypoglycin B

hippurate

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-D-glutamate

L-alanyl-L-glutamate

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

2-iminosuccinate

2-iminobutanoate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

ethylphosphate

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

cobalt-factor III

cobalt-sirohydrochlorin

adenosylcobalamin 5'-phosphate