an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

hydrogenobyrinate a,c-diamide

S-ribosyl-L-homocysteine

2-C-methyl-D-erythritol 4-phosphate

ethylamine

N-isopropylammelide

hydroxyatrazine

urea-1-carboxylate

lipid X

cyclohexyl-isocyanide

N-cyclohexylformamide

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

3-phosphooxypyruvate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

carbon monoxide

3-ureidopropanoate

3-deoxy-D-manno-octulosonate 8-phosphate

2,3,5,6-tetracholorophenol

urocanate

4-imidazolone-5-propanoate

N-succinyl-L,L-2,6-diaminopimelate

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

glycolate

2-phosphoglycolate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

ADP-L-glycero-β-D-manno-heptose

ADP-D-glycero-β-D-manno-heptose

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

2-hydroxy-3-oxosuccinate

meso-tartrate

L-tartrate

succinate semialdehyde

arsenite

DNA without lesion

N6'-acetylkanamycin-B

dihydroxyacetone

5-methylcytosine

N-acetyl-D-muramate 6-phosphate

3-hydroxyanthranilate

N-Formyl-L-kynurenine

malonate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-demethylubiquinol-6

benzoylsuccinyl-CoA

O-acetyl-L-serine

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

hydrogen selenide

prephenate

D-glycero-β-D-manno-heptose 1-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

6-phospho D-glucono-1,5-lactone

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

urea

(S)-dihydroorotate

4-maleyl-acetoacetate

homogentisate

carbonic acid

5-deoxy-α-ribose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-α-D-ribose

3-deoxy-D-arabino-heptulosonate 7-phosphate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

γ-L-glutamyl 5-phosphate

2,5-dioxopentanoate

H₂O

CO₂

5-dehydro-4-deoxy-D-glucarate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-gluconate 6-phosphate

N-acetylglutamyl-phosphate

L-arginino-succinate

(R)-mevalonate

canavaninosuccinate

O-ureido-L-homoserine

thiamine diphosphate

acetoacetate

S-methyl-5'-thioadenosine

7,8-diaminopelargonate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

5-phospho-α-D-ribose 1,2-cyclic phosphate

8-amino-7-oxononanoate

α-D-ribose-1-methylphosphonate 5-phosphate

S-adenosyl 3-(methylsulfanyl)propylamine

pimeloyl-CoA

2-iminoacetate

dethiobiotin

cyanate

(E)-4-coumaroyl-CoA

(S)-ureidoglycolate

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

2-dehydro-3-deoxy-D-galactonate 6-phosphate

(R)-4'-phosphopantothenate

(R)-pantothenate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

glycerone phosphate

prephytoene diphosphate

orotidine 5'-phosphate

(2S)-2-isopropylmalate

3-methyl-2-oxobutanoate

L-histidinol phosphate

N-ethylsuccinimide

imidazole acetol-phosphate

N-ethylmaleimide

4'-phosphopantetheine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-phosphooxy-L-threonine

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

phosphoenolpyruvate

γ-butyrobetaine

(4S)-4-hydroxy-2-oxoheptanedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(S)-3-methyl-2-oxopentanoate

5-carboxymethyl-2-hydroxymuconate

4-methyl-2-oxopentanoate

2-hydroxy-5-carboxymethylmuconate semialdehyde

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

isoquinolin-2(1H)-one

isoquinoline

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

(2-hydroxyphenyl)acetate

phenylglyoxylate

4-hydroxybenzaldehyde

2-(4-hydroxyphenyl)-2-oxoacetate

lipid IV_A

lipid A disaccharide (E. coli)

3-deoxy-α-D-manno-2-octulosonate

carbamoyl phosphate

hydrogen peroxide

2-dehydropantoate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N¹-(5-phospho-β-D-ribosyl)glycinamide

anthranilate

N-(5-phosphoribosyl)-anthranilate

(R)-4'-phosphopantothenoyl-L-cysteine

quinolinate

β-nicotinate D-ribonucleotide

N-acetyl-L-glutamate 5-semialdehyde

methylsalicylate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

isopentenyl diphosphate

salicyl alcohol

prenyl diphosphate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

3'-phosphoadenylyl-sulfate

histidinol

histidinal

preuroporphyrinogen

porphobilinogen

D-erythro-imidazole-glycerol-phosphate

ethanolamine

(R)-mandelate

(S)-mandelate

shikimate

cis,cis-muconate

(+)-muconolactone

3-dehydroquinate

muconolactone

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

nicotinate adenine dinucleotide

5-phospho-β-D-ribosylamine

coproporphyrinogen III

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

6-aminohexanoate linear dimer

6-aminohexanoate cyclic dimer

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

H₂

oxaloacetate

xanthine

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

tartronate semialdehyde

aminoacetone

(S)-4-hydroxy-2-oxopentanoate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

L-canavanine

thiamine phosphate

iminodiacetate

nitrilotriacetate

citrate

L-selenocystathionine

selenophosphate

4-amino-4-deoxychorismate

pyrazine-2-carboxylate

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

isochorismate

4-pyridoxolactone

FK-506

31-O-desmethylFK-506

2,4'-dihydroxyacetophenone

glutathione disulfide

2-oleoylglycerol

3-oxopropanoate

(5R)-5-benzyl-hydantoin

(5S)-5-benzyl-hydantoin

2-aminoacetaldehyde

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(25S)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

acetyl phosphate

5-amino-6-(D-ribitylamino)uracil

2-dehydro-3-deoxy-D-galactonate

3-hydroxypropanoate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

hydroxylamine

L-dehydro-ascorbate

presqualene diphosphate

squalene

3-dehydroshikimate

hop-22(29)-ene

guanidinoacetate

1-deoxy-L-glycero-tetrulose 4-phosphate

2-keto-L-gulonate

(R)-1-aminopropan-2-ol

(R)-1-amino-2-propanol O-2-phosphate

4-hydroxy-2-nonenal

(2R,3S)-3-methylmalate

citraconate

4-aminobutanoate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

α-D-glucosamine 1-phosphate

3-methylmuconolactone

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

α-ribazole 5'-phosphate

α-ribazole

5,6-dimethylbenzimidazole

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

phosphocholine

N-dimethylethanolamine phosphate

N-methylethanolamine phosphate

O-phosphoethanolamine

vanillin

4-acetamidobutanoate

4-acetamidobutanal

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

(4,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

L-gulono-1,4-lactone

3-phosphonopyruvate

dimethylsulfoniopropanoate

2-keto-D-gluconate

2-dehydro-6-phospho-D-gluconate

D-glucurono-6,3-lactone

propynoate

prop-2-ynal

3,4-dihydroxyphenylacetaldehyde

hydrogenobyrinate

(L-threonylcarbamoyl)adenylate

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetate

5-hydroxyindole acetaldehyde

4-imidazoleacetate

imidazole acetaldehyde

(salicyl)adenylate

cis-coumarinic acid-β-D-glucoside

scopolin

4-methylumbelliferyl glucoside

4-fumaryl-acetoacetate

(4-hydroxyphenyl)acetate

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

2,2'-disulfonyl azobenzene

phthalate

α-D-glucopyranosyl-diphosphoundecaprenol

2-(α-hydroxyethyl)thiamine diphosphate

phosphonoacetate

formamide

coniferaldehyde

2-maleylacetate

3-mercaptopyruvate

hydroxypyruvate

methylamine

ammonia

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

dialurate

4-amino-2-methyl-5-pyrimidinemethanol

oxalosuccinate

3-hydroxy-3-phenylpropanoyl-CoA

3'-ketosucrose

(R)-5-phosphomevalonate

(R)-mevalonate diphosphate

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

4-oxoglutaramate

pyruvic oxime

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

5,6-dihydroxyindole

bisorganyltrisulfane

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

2-carboxy-L-xylonolactone

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

3-hydroxy-2-methylpyridine-5-carboxylate

2-carboxy-L-threo-pentonate

(2Z)-2-(acetamidomethylene)succinate

2-oxopent-4-enoate

1,4-dihydroxy-2-naphthoate

adipate

6-oxohexanoate

6-aminohexanoate

5-oxo-L-proline

L-dopachrome

α-D-galacturonate 1-phosphate

core oligosaccharide-lipid A (E. coli K-12 core type)

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

crotonate

cyclohex-1,5-diene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

3-hydroxypimeloyl-CoA

3-oxopimeloyl-CoA

cyclohexane-1-carboxylate

cyclohexane-1-carbonyl-CoA

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

2-amino-3-carboxymuconate-6-semialdehyde

propan-2-ol

isobutanol

octopamine

(R)-synephrine

L-xylo-hex-3-ulono-1,4-lactone

mercuriphenyl acetate

autoinducer 2

isopropylamine

oxamate

N-carbamoyl-2-oxoglycine

selenodiglutathione

glutathioselenol

(glutathion-S-yl)-4-hydroxy-2-nonenal

(2E,6E)-farnesyl diphosphate

(2E,6E)-farnesol

pristanate

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

DNA with lesion

2-iminobutanoate

2-iminosuccinate

2-iminopropanoate

4-[(2Z)-2-(methylimino)ethyl]phenol

4-(2-iminoethyl)phenol

(S)-ureidoglycine

L-homocysteine

4-methylphenol

Fe³⁺

H⁺

K⁺

ammonium

Co²⁺

Fe²⁺

Mg²⁺

Mo²⁺

Hg²⁺

nitrate

hydrogencarbonate

arsenate

thiosulfate

selenate

sulfite

selenide

superoxide

sulfate

nitrite

hydrogensulfite

molybdate

OH^-

selenite

chloride

bromide

phosphonate

phosphate

triphosphate

diphosphate

trimethyl sulfonium

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

3-sulfino-L-alanine

taurine

3-sulfopyruvate

L-cysteate

1-butanesulfonate

isethionate

3-(N-morpholino)propanesulfonate

methanesulfonate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

methanethiol

thiocyanate

S-sulfanylglutathione

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

nitric oxide

monodehydroascorbate radical

hydroxyl radical

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

4-[(E)-2-(methylamino)ethenyl]phenol

4-[(Z)-2-aminoethenyl]phenol

3-amino-4-hydroxybenzaldehyde

3-amino-4-hydroxybenzoate

tyramine

betaine aldehyde

choline

glycine betaine

betaine aldehyde hydrate

3-acetylamino-4-hydroxybenzaldehyde

3-acetylamino-4-hydroxybenzoate

agmatine

spermine

spermidine

putrescine

N¹-acetylspermine

N¹-acetylspermidine

N-acetylputrescine

phosphonoacetaldehyde

2-keto-5-phospho-3-cis-pentenoate

rhizocticin A

2-keto-4-hydroxy-5-phosphopentanoate

L-2-amino-5-phosphono-3-cis-pentenoate

2-amino-4-hydroxy-5-phosphonopentanoate

L-arginyl-4-hydroxy-5-phosphonopentanoate

rhizocticin B

L-valyl-L-arginyl-4-hydroxy-5-phosphonopentanoate

(2-aminoethyl)phosphonate

hypoglycin B

L-kynurenine

carbamate

L-α-amino-ε-keto-pimelate

L-phenylalanine

L-tryptophan

L-selenocysteine

L-proline

L-alanine

glycine

L-isoleucine

L-leucine

L-valine

L-methionine

L-cysteine

L-lysine

L-serine

L-glutamate

L,L-diaminopimelate

L-tyrosine

L-glutamine

L-aspartate

L-arginine

L-asparagine

L-threonine

L-ornithine

L-histidine

L-cystathionine

L-aspartyl-4-phosphate

L-isoglutamine

N-carbamoyl-L-aspartate

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-citrulline

N-acetyl-L-aspartate

N-acetyl-L-ornithine

N-formimino-L-glutamate

L-citrulline

S-sulfo-L-cysteine

L-glutamate-5-semialdehyde

S-adenosyl-L-methionine

L-homoserine

hypoglycin A

S-adenosyl-L-homocysteine

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

O-succinyl-L-homoserine

1-aminocyclopropane-1-carboxylate

L-dopa

L-canaline

L-4-hydroxyglutamate semialdehyde

L-allo-threonine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

D-glutamate

D-serine

L-selenomethionine

L-2-amino-3-oxobutanoate

seleno-L-homocysteine

3-phospho-L-serine

O-acetyl-L-homoserine

3-hydroxy-L-kynurenine

N⁵-hydroxy-L-ornithine

N-carbamoylglycine

N-acetyl-L-methionine

N-acetyl-L-glutamate

sarcosine

D-alanine

D-cysteine

D-methionine

D-proline

XMP

2'-deoxyinosine

2'-deoxyadenosine

5'-deoxyadenosine

GMP

dAMP

ADP

ppGpp

ATP

pppGpp

AMP

GDP

GTP

dADP

dATP

dGDP

dGTP

hypoxanthine

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

IDP

ITP

dITP

dIDP

adenylo-succinate

IMP

adenosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

guanosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

dGMP

2'-deoxyguanosine

cyclic-AMP

isoguanine

8-oxo-dGTP

8-oxo-GTP

5-fluorocytosine

5-fluorouracil

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-rhamnose

GDP-α-D-mannuronate

GDP-α-D-mannose

GDP-α-D-glucose

NAD⁺

NADP⁺

NADH

NADPH

5,6-dihydrothymine

5,6-dihydrouracil

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-α-D-galactose

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

CMP-3-deoxy-β-D-manno-octulosonate

preQ₁

guanine

adenine

cytosine

uracil

thymine

cytidine-3'-monophosphate

uridine 3'-monophosphate

cyclic di-3',5'-guanylate

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

dCMP

dUMP

dTMP

dCDP

dTDP

dUDP

dUTP

dCTP

dTTP

CDP

UDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

CTP

UTP

CMP

UMP

5-hydroxy-CTP

2-hydroxy-dATP

2'-deoxyuridine

2'-deoxycytidine

thymidine

inosine

adenosine

guanosine

xanthosine

uridine

cytidine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

L-gulonate

D-gluconate

D-galactonate

aldehydo-L-galactonate

aldehydo-D-galacturonate

6,6-kestotetraose

6-kestotriose

maltotriose

β-D-cellobiose

6_G-kestotriose

1,6-kestotetraose

1-kestotriose

1,1-kestotetraose

galactosyl-glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

heptosyl-Kdo₂-lipid IV_A

heptosyl-Kdo₂-lipid A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

(heptosyl)₂-Kdo₂-lipid A

glucosyl-(heptosyl)₂-Kdo₂-lipid A

glucosyl-(heptosyl)₂-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₂-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₃-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

sucrose

melibiose

α,α-trehalose

maltotetraose

stachyose

raffinose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3-dehydro-D-glucopyranose

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-glyceraldehyde 3-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

lotaustralin

linamarin

neolinustatin

linustatin

taxiphyllin

kanamycin B

glycerol

D-sorbitol

L-iditol

D-mannitol

galactitol

D-arabinitol

β-D-fructofuranose

keto-L-sorbose

keto-D-fructose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

D-glyceraldehyde

L-glyceraldehyde

glycolaldehyde

α-L-arabinopyranose

α-D-xylopyranose

aldehydo-D-ribose

β-D-ribopyranose

α-D-ribofuranose

β-D-ribofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-mannopyranose

β-D-glucopyranose

α-D-glucopyranose

L-sorbosone

aldehydo-D-mannose

D-xylulose

L-sorbosone 2,6-lactone

L-sorbosone 1,4-lactone

salicylaldehyde

vanillylamine

leucodopachrome

4-methylumbelliferone

scopoletin

coumarin

geranyl diphosphate

apo-4'-lycopenal

all-trans-phytoene

15-cis-phytoene

apo-4'-lycopenoate

all-trans-retinol

all-trans-retinyl palmitate

(3S)-2,3-epoxy-2,3-dihydrosqualene

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(5E)-3-oxo-dodec-5-enoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-dec-3-enoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

4-trans-undecenoyl-CoA

4-cis-undecenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-octanol

myo-inositol

scyllo-inositol

1D-chiro-inositol

scyllo-inosose

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1-keto-D-chiro-inositol

1D-myo-inositol 3-monophosphate

3,5-cyclohexadiene-1,2-diol-1-carboxylate

protocatechuate

catechol

3,4-dihydroxyphenylacetate

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycolaldehyde

dopamine

2,3-dihydroxybenzoate

methanol

ethanol

propan-1-ol

butan-1-ol

phytol

3-(N-morpholino)propanal

(2E,6E)-farnesal

phytenal

methylglyoxal

phenylacetaldehyde

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

butan-1-al

acetaldehyde

isobutanal

formaldehyde

1-octanal

1-propanal

(S)-lactaldehyde

diacetyl

acetone

menadione

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

dopaquinone

caldariellaquinone

Reactive Blue 5

a coenzyme-A group

(R)-citramalate

3-oxoadipate

formate

pyruvate

propanoate

acetate

butanoate

(R)-lactate

(S)-lactate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

3-carboxy-cis,cis-muconate

cis-aconitate

(2S,3S)-2-methylcitrate

(2R,3S)-2-methylisocitrate

cis-2-methylaconitate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

chorismate

(3E)-2-oxohex-3-enedioate

fumarate

succinate

(S)-malate

D-glucarate

D-galactarate

(4S)-4-hydroxy-2-oxoglutarate

oleate

(15Z)-tetracosenoate

phytenate

(3E,5Z)-tetradecadienoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

linoleate

γ-linolenate

leukotriene-D4

leukotriene-E4

palmitate

decanoate

octanoate

stearate

(2E,6E)-farnesoate

2-oxoglutarate

2-oxobutanoate

glyoxylate

4-(methylsulfanyl)-2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

trans-cinnamate

salicylate

benzoate

4-aminobenzoate

4-hydroxybutanoate

(R)-glycerate

(R)-3-hydroxybutanoate

allantoate

L-carnitine

(R)-pantoate

orotate

5-chloro-5-deoxy-D-ribonate

5-deoxy-D-glucuronate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

toluene

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

urate

4-hydroxybenzoate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

cyanuric acid

benzene

phenol

2,3,5,6-tetrachlorohydroquinone

menadiol

2,3,6-trichlorohydroquinone

2,6-dichlorohydroquinone

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-9

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

demethylmenaquinol-13

demethylmenaquinol-12

demethylmenaquinol-11

demethylmenaquinol-10

demethylmenaquinol-6

demethylmenaquinol-9

demethylmenaquinol-7

demethylmenaquinol-8

menaquinol-13

menaquinol-12

menaquinol-11

menaquinol-10

menaquinol-6

menaquinol-9

menaquinol-7

menaquinol-8

ubiquinol-9

ubiquinol-8

ubiquinol-6

ubiquinol-7

ubiquinol-10

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

vanillyl mandelate

atrazine

ferulate

coumarinate

(2R,3S,4S)-leucocyanidin

(2R,3S,4S)-leucopelargonidin

(+)-taxifolin

(+)-dihydrokaempferol

pentachlorophenol

preQ₀

hydrogen cyanide

(indole-3-yl)acetonitrile

acrylonitrile

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

7,8-dihydrolumazine

FMN

riboflavin

FAD

FMNH₂

FADH₂

reduced riboflavin

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

cyclic pyranopterin phosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropterin

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-phosphate

molybdopterin

molybdopterin adenine dinucleotide

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

6,7-dimethyl-8-(1-D-ribityl)lumazine

hydantoin

adenosylcobalamin

cob(I)alamin

sirohydrochlorin

cobyrinate

precorrin-6A

precorrin-6B

precorrin-3A

precorrin-2

precorrin-1

cobalt-precorrin-2

precorrin-4

precorrin-3B

cobalt-precorrin-6A

cobalt-precorrin-6B

precorrin-5

precorrin-8x

precorrin-7

cobalt-precorrin-5B

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

nicotinate

thiamine

nicotinamide

L-ascorbate

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal

pyridoxamine

pyridoxine

4-pyridoxate

coenzyme A

2-chloroacetate

ethylphosphate

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

(R)-NADHX

(S)-NADHX

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

acetyl-CoA

phenylacetyl-CoA

2-methylacetoacetyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

3'-dephospho-CoA

succinyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

malonyl-CoA

4-hydroxybutanoyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

isobutanoyl-CoA

(25S)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(25R)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(25R)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

4-hydroxybenzoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-hydroxypropanoyl-CoA

(2E,5Z)-tetradecenoyl-CoA

trans-feruloyl-CoA

glutaryl-CoA

(E)-glutaconyl-CoA

acryloyl-CoA

2-methylbutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

3-oxooctadecanoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

decanoyl-CoA

octanoyl-CoA

hexanoyl-CoA

lauroyl-CoA

propanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(E)-cinnamoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

trans-dienelactone

cis-dienelactone

L-galactono-1,4-lactone

D-glucono-1,5-lactone

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

2-methoxy-6-(all-trans-octaprenyl)phenol

ethene

phenylacetate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

cholest-4-en-3-one

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA