an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

tartronate semialdehyde

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-dehydro-3-deoxy-D-gluconate

L-selenocystathionine

4-imidazoleacetate

imidazole acetaldehyde

5-hydroxyindole acetate

3,4-dihydroxyphenylacetaldehyde

propynoate

prop-2-ynal

4-acetamidobutanoate

4-acetamidobutanal

dimethylsulfoniopropanoate

2-keto-D-gluconate

(S)-2-amino-6-oxohexanoate

1-piperideine 6-carboxylate

glycerone phosphate

dihydroxyacetone

(4,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

succinate semialdehyde

O-ureido-L-homoserine

hydrogenobyrinate a,c-diamide

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

S-ribosyl-L-homocysteine

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

D-galacto-hexodialdose

α-D-glucosamine 1-phosphate

carbonic acid

(2S)-2-isopropylmalate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

nicotinate adenine dinucleotide

β-nicotinate D-ribonucleotide

4-methylumbelliferyl glucoside

4-hydroxybenzaldehyde

scopolin

cis-coumarinic acid-β-D-glucoside

preuroporphyrinogen

melatonin

(R)-pantothenate

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

(S)-3-methyl-2-oxopentanoate

quinolinate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

lipid IV_A

3-hydroxyanthranilate

N-Formyl-L-kynurenine

phenylglyoxylate

2-(4-hydroxyphenyl)-2-oxoacetate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

4-methyl-2-oxopentanoate

(R)-mandelate

(S)-mandelate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

O-D-alanyl-poly(ribitol phosphate)

poly(ribitol phosphate)

2-amino-2-deoxy-D-gluconate 6-phosphate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-muramate 6-phosphate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

7,8-diaminopelargonate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

8-amino-7-oxononanoate

pimeloyl-CoA

dethiobiotin

4-aminobutanoate

coniferaldehyde

N-acetylglutamyl-phosphate

indole-3-ethanol

H₂O

porphobilinogen

5-aminolevulinate

CO₂

shikimate 3-phosphate

shikimate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

ethanolamine

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

phosphoenolpyruvate

histidinol

histidinal

L-histidinol phosphate

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

4'-phosphopantetheine

anthranilate

N-(5-phosphoribosyl)-anthranilate

glycolate

2-phosphoglycolate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

6-aminohexanoate linear dimer

6-aminohexanoate cyclic dimer

2-maleylacetate

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

(2-hydroxyphenyl)acetate

2-iminoacetate

γ-L-glutamyl 5-phosphate

3-dehydroshikimate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

2-dehydro-3-deoxy-D-galactonate

2-oxopropyl-CoM

5-phospho-α-D-ribose 1,2-cyclic phosphate

α-D-ribose-1-methylphosphonate 5-phosphate

orotidine 5'-phosphate

thiamine diphosphate

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

cyanate

urea

(S)-ureidoglycolate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-gluconate 6-phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

(R)-1-amino-2-propanol O-2-phosphate

(S)-dihydroorotate

(R)-1-aminopropan-2-ol

4-hydroxy-2-nonenal

hydrogen peroxide

DNA without lesion

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

2-dehydropantoate

3-methyl-2-oxobutanoate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

prenyl diphosphate

α-D-galactosyl-diphosphoundecaprenol

3-deoxy-D-manno-octulosonate 8-phosphate

3-deoxy-α-D-manno-2-octulosonate

4-maleyl-acetoacetate

homogentisate

acetoacetate

4-fumaryl-acetoacetate

hydroxypyruvate

D-glucurono-6,3-lactone

L-gulono-1,4-lactone

(R)-3-((R)-3-hydroxybutanoyloxy)-butanoate

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol aldehyde

indole-3-glycol

(L-threonylcarbamoyl)adenylate

isobutanol

3-methylbutanal

3-methylbutanol

2-methylbutanal

2-methylbutanol

2-phenylethanol

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-pyrimidinemethanol

carbamoyl phosphate

prephytoene diphosphate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

3-oxopropanoate

oxaloacetate

enol-phenylpyruvate

iminodiacetate

nitrilotriacetate

5-amino-6-(D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

(S)-4-amino-5-oxopentanoate

6-phospho D-glucono-1,5-lactone

hydrogenobyrinate

coproporphyrinogen III

prephenate

xanthine

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

3-demethylubiquinol-6

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

malonate

3-phosphooxypyruvate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

5-enolpyruvoyl-shikimate 3-phosphate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

ADP-L-glycero-β-D-manno-heptose

ADP-D-glycero-β-D-manno-heptose

O-acetyl-L-serine

benzoylsuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

hydrogen selenide

pseudouridine 5'-phosphate

nigerose

α-ribazole

citrate

S-formylglutathione

selenophosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

D-glycero-β-D-manno-heptose 1-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

phosphocholine

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

N-acetyl-L-glutamate 5-semialdehyde

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphosulfate

urocanate

4-imidazolone-5-propanoate

(E)-2-benzylidenesuccinyl-CoA

2-(α-hydroxyethyl)thiamine diphosphate

S-acetyldihydrolipoamide

dihydrolipoamide

urea-1-carboxylate

(25S)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

salicyl alcohol

methylsalicylate

2-aminoacetaldehyde

adenosine 5'-phosphoselenate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

L-arginino-succinate

L-canavanine

canavaninosuccinate

glutathione disulfide

(S)-2,3,4,5-tetrahydrodipicolinate

isopentenyl diphosphate

2-C-methyl-D-erythritol 4-phosphate

lipid A disaccharide (E. coli)

lipid X

ethylamine

N-isopropylammelide

hydroxyatrazine

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

N-ethylsuccinimide

N-ethylmaleimide

5-methylcytosine

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(4S)-4-hydroxy-2-oxoheptanedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

5-carboxymethyl-2-hydroxymuconate

2-hydroxy-5-carboxymethylmuconate semialdehyde

isoquinolin-2(1H)-one

isoquinoline

(salicyl)adenylate

3-phosphonopyruvate

4-amino-4-deoxychorismate

vanillin

carbon monoxide

phosphonoacetate

presqualene diphosphate

squalene

2-hydroxy-3-oxosuccinate

meso-tartrate

L-tartrate

aminoacetone

hop-22(29)-ene

dimethyl sulfoxide

γ-butyrobetaine

acetyl phosphate

3-methylmuconolactone

muconolactone

cis,cis-muconate

(+)-muconolactone

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

2,2'-disulfonyl azobenzene

phthalate

chloroacetaldehyde

(S)-4-hydroxy-2-oxopentanoate

2-methyl-trans-aconitate

(2R,3S)-3-methylmalate

citraconate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(4-hydroxyphenyl)acetate

norspermidine

carboxynorspermidine

methylamine

H₂

5,6-dihydroxyindole-2-carboxylate

L-dopachrome

N-dimethylethanolamine phosphate

N-methylethanolamine phosphate

O-phosphoethanolamine

heteropyrithiamine

5,6-dihydroxyindole

oxalosuccinate

2-amino-3-carboxymuconate-6-semialdehyde

octopamine

(R)-synephrine

2-oxopent-4-enoate

5-dehydro-4-deoxy-D-glucarate

mercuriphenyl acetate

2-amino-5-oxocyclohex-1-enecarboxyl-CoA

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

2-dehydro-6-phospho-D-gluconate

α-D-galacturonate 1-phosphate

L-xylo-hex-3-ulono-1,4-lactone

crotonate

cyclohex-1,5-diene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

3-hydroxypimeloyl-CoA

3-oxopimeloyl-CoA

cyclohexane-1-carboxylate

cyclohexane-1-carbonyl-CoA

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

core oligosaccharide-lipid A (E. coli K-12 core type)

dialurate

ammonia

3'-ketosucrose

adipate

6-oxohexanoate

6-aminohexanoate

5-oxo-L-proline

N⁵-carboxyaminoimidazole ribonucleotide

autoinducer 2

oxamate

N-carbamoyl-2-oxoglycine

isopropylamine

glutathioselenol

selenodiglutathione

formamide

pseudouridine

propene

4-oxoglutaramate

1-pyrroline

bisorganyltrisulfane

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

L-dehydro-ascorbate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

hypoglycin B

L-2-aminoadipate

L-kynurenine

carbamate

L-α-amino-ε-keto-pimelate

L-methionine

L-cysteine

L-valine

L-isoleucine

glycine

L-alanine

L-proline

L-leucine

L-phenylalanine

L-selenocysteine

L-tryptophan

L-asparagine

L-cystathionine

L-2,4-diaminobutanoate

L-lysine

L-serine

L-glutamate

L-glutamine

L-histidine

L-ornithine

L-tyrosine

L-aspartate

L-threonine

L-arginine

L-aspartyl-4-phosphate

L,L-diaminopimelate

L-isoglutamine

N-carbamoyl-L-aspartate

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-aspartate

N-formimino-L-glutamate

N⁵-formyl-N⁵-hydroxy-L-ornithine

L-citrulline

L-aspartate 4-semialdehyde

L-homoserine

O-phospho-L-homoserine

hypoglycin A

L-glutamate-5-semialdehyde

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-homocysteine

S-sulfo-L-cysteine

3-sulfino-L-alanine

L-dopa

O-succinyl-L-homoserine

1-aminocyclopropane-1-carboxylate

L-4-hydroxyglutamate semialdehyde

L-allo-threonine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-saccharopine

L-selenomethionine

seleno-L-homocysteine

L-2-amino-3-oxobutanoate

O-acetyl-L-homoserine

cis-4-hydroxy-D-proline

3-hydroxy-L-kynurenine

trans-4-hydroxy-L-proline

N⁵-hydroxy-L-ornithine

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

L-threonine 3-O-phosphate

3-phospho-L-serine

D-glutamate

D-alanine

D-methionine

D-cysteine

D-serine

β-alanine

(S)-3-amino-2-methylpropanoate

ITP

IDP

dITP

dIDP

cyclic-AMP

guanosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

adenosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

GDP

GTP

ADP

ATP

2'-deoxyguanosine

dGTP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

AMP

GMP

hypoxanthine

IMP

dADP

dGDP

adenylo-succinate

dGMP

5'-deoxyadenosine

ppGpp

pppGpp

2'-deoxyinosine

2'-deoxyadenosine

dAMP

dATP

XMP

isoguanine

8-oxo-dGTP

8-oxo-GTP

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

CDP-4-dehydro-6-deoxy-α-D-glucose

ADP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-α-D-perosamine

GDP-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-D-glucose

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-α-D-galactose

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-galacturonate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

adenine

guanine

uracil

thymine

cytosine

preQ₁

cyclic di-3',5'-guanylate

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

dCMP

dTMP

dUMP

dTDP

dCDP

dUDP

dTTP

dCTP

dUTP

UDP

CDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

UTP

CTP

UMP

CMP

2-hydroxy-dATP

5-hydroxy-CTP

NADP⁺

NAD⁺

NADPH

NADH

uridine 3'-monophosphate

cytidine-3'-monophosphate

2'-deoxyuridine

2'-deoxycytidine

thymidine

inosine

adenosine

guanosine

uridine

cytidine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5-fluorocytosine

5-fluorouracil

D-gluconate

D-galactonate

L-gulonate

aldehydo-L-galactonate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3-dehydro-D-glucopyranose

lotaustralin

taxiphyllin

linamarin

linustatin

neolinustatin

sucrose 6^G-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

4-phospho-D-erythronate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-tagatofuranose 6-phosphate

D-tagatofuranose 1,6-bisphosphate

D-fructose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-glyceraldehyde 3-phosphate

β-D-fructofuranose

glycolaldehyde

aldehydo-D-ribose

β-D-ribopyranose

α-D-ribofuranose

β-D-ribofuranose

β-D-galactopyranose

α-D-galactopyranose

β-D-mannopyranose

β-D-glucopyranose

α-D-glucopyranose

aldehydo-D-mannose

D-glyceraldehyde

L-glyceraldehyde

D-xylulose

keto-D-fructose

keto-L-sorbose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

glycerol

D-sorbitol

D-mannitol

galactitol

D-arabinitol

heptosyl-Kdo₂-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

heptosyl-Kdo₂-lipid A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

α-Kdo-(2→6)-lipid IV_A

(heptosyl)₂-Kdo₂-lipid A

glucosyl-(heptosyl)₂-Kdo₂-lipid A

glucosyl-(heptosyl)₂-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₂-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₃-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

6,6-kestotetraose

6-kestotriose

β-D-cellobiose

maltotriose

6_G-kestotriose

1,6-kestotetraose

1-kestotriose

1,1-kestotetraose

sucrose

melibiose

α,α-trehalose

maltotetraose

maltopentaose

maltohexaose

stachyose

raffinose

aldehydo-D-galacturonate

salicylaldehyde

4-methylumbelliferone

scopoletin

coumarin

all-trans-retinol

all-trans-retinyl palmitate

(3S)-2,3-epoxy-2,3-dihydrosqualene

(2E,6E)-farnesyl diphosphate

(-)-β-elemene

β-sesquiphellandrene

(S)-β-bisabolene

α-chamigrene

(-)-α-cuprenene

α-zingiberene

(+)-β-chamigrene

β-acoradiene

(E)-β-farnesene

(+)-β-barbatene

isobazzanene

(+)-thujopsene

(+)-α-barbatene

α-copaene

α-humulene

(-)-β-caryophyllene

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(-)-cuparene

(2E,6E)-farnesol

(3R)-linalool

(3S)-linalool

geranyl diphosphate

δ-cuprenene

apo-4'-lycopenal

all-trans-phytoene

15-cis-phytoene

apo-4'-lycopenoate

methyl aklanonate

aklanonate

pyochelin

vanillylamine

indole-5,6-quinone

indole-5,6-quinone-2-carboxylate

leucodopachrome

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1-oleoyl-2-lyso-glycerone phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

myo-inositol

scyllo-inositol

1D-chiro-inositol

scyllo-inosose

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1-keto-D-chiro-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

3,5-cyclohexadiene-1,2-diol-1-carboxylate

3,4-dihydroxymandelate

3,4-dihydroxyphenylacetate

catechol

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

protocatechuate

dopamine

2,3-dihydroxybenzoate

ethylene glycol

1-octanol

ethanol

propan-1-ol

phytol

butan-1-ol

methanol

(2E,6E)-farnesal

3-(N-morpholino)propanal

phytenal

(S)-lactaldehyde

(R)-lactaldehyde

1-octanal

butan-1-al

acetaldehyde

formaldehyde

1-propanal

isobutanal

methylglyoxal

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

menadione

dopaquinone

Reactive Blue 5

diacetyl

acetone

a coenzyme-A group

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

2-oxoglutarate

pyruvate

glyoxylate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

4-aminobenzoate

benzoate

5-deoxy-D-glucuronate

orotate

allantoate

acetate

(R)-pantoate

L-carnitine

(S)-1-pyrroline-5-carboxylate

aldehydo-D-glucuronate

pristanate

octanoate

decanoate

palmitate

butanoate

stearate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

oleate

linoleate

γ-linolenate

(3E,5Z)-tetradecadienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

(2E,6E)-farnesoate

3-oxoadipate

formate

propanoate

(R)-lactate

(S)-lactate

4-hydroxybutanoate

(2R,3S)-2-methylisocitrate

(R)-glycerate

(R)-3-hydroxybutanoate

cis-aconitate

(2S,3S)-2-methylcitrate

3-carboxy-cis,cis-muconate

cis-2-methylaconitate

D-threo-isocitrate

chorismate

D-glucarate

D-galactarate

fumarate

succinate

(S)-malate

4-hydroxybenzoate

4-tyrosol

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

benzene

cyanuric acid

coumarinate

ferulate

(+)-taxifolin

(2R,3S,4S)-leucocyanidin

(2R,3S,4S)-leucopelargonidin

(+)-dihydrokaempferol

3-chlorobenzoate

3-chlorobenzaldehyde

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

tyramine

N-acetyl-serotonin

phenol

4-methylphenol

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

3-demethylubiquinol-9

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

demethylmenaquinol-8

menaquinol-8

ubiquinol-9

ubiquinol-8

ubiquinol-6

ubiquinol-7

ubiquinol-10

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

atrazine

hydrogen cyanide

preQ₀

(indole-3-yl)acetonitrile

acrylonitrile

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

7,8-dihydrolumazine

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropterin

cyclic pyranopterin phosphate

7,8-dihydroneopterin 2',3'-cyclic phosphate

7,8-dihydroneopterin 3'-phosphate

molybdopterin

molybdopterin adenine dinucleotide

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

MoO₂-molybdopterin cofactor

FMN

FAD

riboflavin

FMNH₂

reduced riboflavin

FADH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

cobyrinate

sirohydrochlorin

precorrin-5

precorrin-4

precorrin-6A

precorrin-6B

precorrin-8x

precorrin-7

precorrin-3B

precorrin-3A

precorrin-2

precorrin-1

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-2

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

adenosylcobalamin

cob(I)alamin

pyridine

nicotinate

nicotinamide

thiamine

L-ascorbate

pyridoxine 5'-phosphate

pyridoxine

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxal 5'-phosphate

pyridoxal

coenzyme A

coenzyme M

(R)-NADHX

(S)-NADHX

glycine betaine

D-glucono-1,5-lactone

cis-dienelactone

trans-dienelactone

L-galactono-1,4-lactone

D-galactono-1,4-lactone

2-methylacetoacetyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

4-hydroxybenzoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

phenylacetyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

acetyl-CoA

malonyl-CoA

3'-dephospho-CoA

glutaryl-CoA

(E)-glutaconyl-CoA

dihomo γ-linolenoyl-CoA

(+)-7-epi-jasmonoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

succinyl-CoA

(2E,5Z)-tetradecenoyl-CoA

(25S)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(25R)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(25R)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

trans-feruloyl-CoA

anthraniloyl-CoA

isobutanoyl-CoA

L-carnitinyl-CoA

γ-butyrobetainyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

crotonobetainyl-CoA

benzoyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

3-oxooctadecanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

hexadecanedioyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

octanoyl-CoA

decanoyl-CoA

lauroyl-CoA

hexanoyl-CoA

propanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

ethene

phenylacetate

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

(+)-7-epi-jasmonate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

cholest-4-en-3-one

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

3-oxocholest-4,24-dien-26-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

(25S)-26-oxocholest-4-en-3-one

(25S)-26-hydroxycholest-4-en-3-one

cholesterol

cholest-5-en-3-one

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

methane

5-amino-4-imidazolecarboxyamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(S)-(+)-allantoin

6-caprolactam

acetamide

bromochloromethane

(S)-2-chloropropanoate

2-chloroacetate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

choline

choline sulfate

betaine aldehyde

betaine aldehyde hydrate

agmatine

spermine

spermidine

putrescine

N-acetylputrescine

N¹-acetylspermine

N¹-acetylspermidine

4-aminobutanal

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

4-[(E)-2-(methylamino)ethenyl]phenol

4-[(Z)-2-aminoethenyl]phenol

(R)-1,2-epoxypropane

(S)-1,2-epoxypropane

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

5,10-methenyltetrahydrofolate mono-L-glutamate

sulfate

superoxide

hydrogencarbonate

thiosulfate

nitrate

nitrite

sulfite

selenate

selenide

molybdate

selenite

hydrogensulfite

OH^-

chloride

bromide

phosphonate

phosphate

diphosphate

triphosphate

Fe³⁺

Co²⁺

Mo²⁺

Fe²⁺

Mg²⁺

Cd²⁺

Hg²⁺

ammonium

K⁺

H⁺

trimethyl sulfonium

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(R)-citramalate

3-dimethylsulfoniopropionaldehyde

3-(methylsulfanyl)propanal

methionol