an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

L-dopachrome

selenodiglutathione

glutathioselenol

4-amino-2-methyl-5-pyrimidinemethanol

2-amino-3-carboxymuconate-6-semialdehyde

1,4-dihydroxy-2-naphthoyl-CoA

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

isochorismate

N⁵-carboxyaminoimidazole ribonucleotide

chlorate

S-ribosyl-L-homocysteine

autoinducer 2

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

N-acetyl-D-muramate 6-phosphate

N-succinyl-L,L-2,6-diaminopimelate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

1,4-dihydroxy-2-naphthoate

cis-stilbene oxide

(1R,2R)-1,2-diphenylethane-1,2-diol

ammonia

itaconate

N-phenylhydroxylamine

(R)-1-amino-2-propanol O-2-phosphate

(S)-5-hydroxyisourate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

3-keto-L-gulonate 6-phosphate

L-dehydro-ascorbate

dehydroascorbate (bicyclic form)

2-aminomalonate semialdehyde

cyanate

3-keto-L-gulonate

2,3-dioxo-L-gulonate

indole-3-ethanol

N⁴-(β-N-acetyl-D-glucosaminyl)-L-asparagine

glutathionylspermidine

squalene

presqualene diphosphate

4-hydroxy-2-nonenal

ADP-L-glycero-β-D-manno-heptose

carbonic acid

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

2-carboxy-L-threo-pentonate

cyclic- 3,4-O-oxalyl-L-threonate

enol-phenylpyruvate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

5,6-dihydroxyindole

cyclic-2,3-O-oxalyl-L-threonate

2-carboxy-L-xylonolactone

pyruvic oxime

4-oxoglutaramate

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol

indole-3-glycol aldehyde

isobutanol

3-methylbutanol

3-methylbutanal

2-methylbutanol

2-methylbutanal

2-phenylethanol

propane-1,3-diamine

N-carbamoylputrescine

2-iminoacetate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

hydroxylamine

2-(α-hydroxyethyl)thiamine diphosphate

benzoylsuccinyl-CoA

1-piperideine 6-carboxylate

(S)-2-amino-6-oxohexanoate

creatinine

(2S,5S)-hexanediol

2,5-hexanedione

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

S-methyl-5-thio-α-D-ribose 1-phosphate

5-deoxy-α-ribose 1-phosphate

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine 4-sulfate

(S)-ureidoglycolate

urea

urea-1-carboxylate

phthalate

2,2'-disulfonyl azobenzene

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

(4S)-4-hydroxy-2-oxoheptanedioate

succinate semialdehyde

prephytoene diphosphate

(R)-6-hydroxynicotine

luteolin 7-O-[β-D-glucosyluronate-(1,2)-β-D-glucosiduronate]-4'-O-β-D-glucosiduronate

luteolin 7-O-β-D-glucuronide

N-acetyl-L-glutamate 5-semialdehyde

3-ureidopropanoate

(L-threonylcarbamoyl)adenylate

citrate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

5-oxo-L-proline

salicyl alcohol

methylsalicylate

3'-phosphoadenylyl-sulfate

chlorite

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

4-acetamidobutanal

4-acetamidobutanoate

2-O-(6-phospho-α-D-mannosyl)-D-glycerate

malonate

hydroxypyruvate

tartronate semialdehyde

5-dehydro-D-gluconate

2-oxoglutaramate

N-acetyl-β-glucosaminylamine

carbon monoxide

(7R)-7-(4-carboxybutanamido)cephalosporanate

glutarate

3-deoxy-D-glycero-2,5-hexodiulosonate

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

N-succinyl-2-amino-6-ketopimelate

2-(4-hydroxyphenyl)-2-oxoacetate

phenylglyoxylate

tryptamine

3-keto-β-D-galactose

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

formamide

2-C-methyl-D-erythritol 4-phosphate

(E)-4-coumaroyl-CoA

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

α-D-galactosyl-diphosphoundecaprenol

7,8-didemethyl-8-hydroxy-5-deazariboflavin

oxalate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

aminoacetone

acetyl phosphate

prephenate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

(indol-3-yl)acetamide

propionamide

4-pyridoxolactone

2,3,5,6-tetracholorophenol

2-maleylacetate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

3-methylbenzyl alcohol

3-methylbenzaldehyde

4-methylbenzyl alcohol

S-formylglutathione

nigerose

(6E)-8-oxolinalool

(6E)-8-hydroxylinalool

porphobilinogen

DNA without lesion

4-amino-4-deoxychorismate

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

D-erythro-imidazole-glycerol-phosphate

isopentenyl diphosphate

prenyl diphosphate

chloramphenicol

3-phosphooxypyruvate

lipid IV_A

(S)-dihydroorotate

orotidine 5'-phosphate

4-fumaryl-acetoacetate

acetoacetate

(2-hydroxyphenyl)acetate

homogentisate

4-maleyl-acetoacetate

thiamine diphosphate

imidazole acetol-phosphate

L-histidinol phosphate

histidinal

histidinol

xanthine

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

5-amino-6-(D-ribitylamino)uracil

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

2-isopropylmaleate

(2S)-2-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

oxalosuccinate

oxaloacetate

3-methyl-2-oxobutanoate

2-dehydropantoate

(R)-pantothenate

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

quinolinate

glycerone phosphate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

lipid X

lipid A disaccharide (E. coli)

ethanolamine

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

4-imidazolone-5-propanoate

urocanate

3-deoxy-D-arabino-heptulosonate 7-phosphate

L-canavanine

O-ureido-L-homoserine

canavaninosuccinate

L-arginino-succinate

carbamoyl phosphate

N-acetylglutamyl-phosphate

4'-phosphopantetheine

glutathione disulfide

α-D-glucosamine 1-phosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

5,6-dimethylbenzimidazole

β-nicotinate D-ribonucleotide

α-ribazole 5'-phosphate

anthranilate

2-phosphoglycolate

glycolate

preuroporphyrinogen

O-acetyl-L-serine

hydrogen selenide

2-dehydro-3-deoxy-D-gluconate

luteolin 7-O-β-D-diglucuronide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

nicotinate adenine dinucleotide

(S)-2,3,4,5-tetrahydrodipicolinate

cis-coumarinic acid-β-D-glucoside

scopolin

4-hydroxybenzaldehyde

4-methylumbelliferyl glucoside

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

coproporphyrinogen III

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

hydrogen peroxide

H₂

L-quinate

3-dehydroquinate

shikimate

3-dehydroshikimate

8-amino-7-oxononanoate

pimeloyl-CoA

3-deoxy-α-D-manno-2-octulosonate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

CO₂

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

γ-L-glutamyl 5-phosphate

N-(5-phosphoribosyl)-anthranilate

phosphoenolpyruvate

3-deoxy-D-manno-octulosonate 8-phosphate

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

H₂O

4-methylphenol

L-homocysteine

DNA with lesion

phenylacetate

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

protochlorophyllide a

cobalt-factor III

cobalt-precorrin-3

cobalt-sirohydrochlorin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

cobalt-precorrin-4

cobalt-precorrin-5A

Mg-protoporphyrin

adenosyl-cobinamide phosphate

adenosylcobyrate

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)alamin

adenosylcobalamin

cob(I)inamide

adenosylcobinamide

protoheme

hydrogen cyanide

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrinogen IX

protoporphyrin IX

siroheme

(Z,Z)-biliverdin-IX α

(Z,Z)-bilirubin-IX α

hydrogen sulfide

oxygen

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

(R)-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

Reactive Blue 5

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

N-acetyl-D-mannosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

1-oleoyl-2-lyso-glycerone phosphate

CMP-N-acetyl-β-neuraminate

(S)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

(glutathion-S-yl)-4-hydroxy-2-nonenal

monodehydroascorbate radical

hydroxyl radical

superoxide

nitrobenzene

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

chloramphenicol 3-acetate

4-nitrophenyl phosphate

4-nitrophenol

N-acetyl-β-neuraminate

dimethyl sulfide

methionol

3-(methylsulfanyl)propanal

S-(hydroxymethyl)glutathione

glutathione

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

taurine

L-cysteate

3-sulfopyruvate

methanesulfonate

1-butanesulfonate

isethionate

3-(N-morpholino)propanesulfonate

N-acetyl-D-galactosamine 6-O-sulfate

3-sulfino-L-alanine

Fe³⁺

ammonium

K⁺

H⁺

Co²⁺

Mg²⁺

Ni²⁺

Fe²⁺

trimethyl sulfonium

selenite

perchlorate

nitrate

hydrogensulfite

OH^-

sulfite

sulfate

selenate

hydrogencarbonate

molybdate

nitrite

thiosulfate

phosphonate

phosphate

triphosphate

diphosphate

chloride

(2Z)-2-aminobut-2-enoate

2-iminopropanoate

2-aminoprop-2-enoate

agmatine

N¹-acetylspermidine

N-acetylputrescine

N¹-acetylspermine

dehydrospermidine

cadaverine

spermine

spermidine

putrescine

betaine aldehyde hydrate

choline

betaine aldehyde

2-phenylethylamine

serotonin

sn-glycero-3-phosphocholine

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

1-oleoyl-2-palmitoyl-phosphatidylglycerol

fluoroacetaldehyde

fluoroacetate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-chloromaleylacetate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

pentachlorophenol

3-chlorobenzyl alcohol

3-chlorobenzaldehyde

allantoate

acetamide

(7R)-7 aminocephalosporanate

(S)-(+)-allantoin

phosphoribulosylformimino-AICAR-phosphate

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

nicotinamide

cycloartenol

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

lanosterol

solasodine 3-O-β-D-glucoside

brassicasterol 3-O-β-D-glucoside

stigmasterol 3-O-β-D-glucoside

cholesteryl-β-D-glucoside

β-sitosterol 3-O-β-D-glucoside

solasodine

cholesterol

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

isovaleryl-CoA

phenylacetyl-CoA

itaconyl-CoA

2-methylbutanoyl-CoA

2-methylacetoacetyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

formyl-CoA

oxalyl-CoA

(3S)-citryl-CoA

4-hydroxybenzoyl-CoA

methylacrylyl-CoA

(2E,5Z)-tetradecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(3S)-hydroxyadipyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3-methylcrotonyl-CoA

3-methylglutaconyl-CoA

succinyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

acetyl-CoA

malonyl-CoA

3'-dephospho-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-octadec-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

phytanoyl-CoA

(S)-malyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

decanoyl-CoA

octanoyl-CoA

palmitoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

all-trans-retinyl palmitate

cis-dienelactone

trans-dienelactone

L-homoserine lactone

PAI-1

HAI-1

PAI-1-2

VAI-1

VAI-1-2

AAI-1

D-glucono-1,5-lactone

FMNH₂

FMN

FADH₂

FAD

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

ubiquinol-8

menaquinol-6

menaquinol-7

menaquinol-8

demethylmenaquinol-6

demethylmenaquinol-7

demethylmenaquinol-8

3-demethylubiquinol-8

molybdopterin

coenzyme A

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

L-ascorbate

riboflavin

thiamine

nicotinate

pyridoxine

pyridoxal

menadione

all-trans-retinol

(S)-1-pyrroline-5-carboxylate

precorrin-3A

precorrin-3B

precorrin-7

precorrin-8x

precorrin-2

precorrin-1

precorrin-4

precorrin-5

precorrin-6B

precorrin-6A

sirohydrochlorin

hydantoin

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

molybdopterin adenine dinucleotide

7,8-dihydropterin

cyclic pyranopterin phosphate

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

adenine

guanine

hypoxanthine

dAMP

dGMP

dITP

dATP

dGTP

dIDP

dGDP

dADP

IDP

GDP

ADP

XMP

GMP

IMP

AMP

ITP

GTP

ATP

2'-deoxyguanosine

2'-deoxyadenosine

2'-deoxyinosine

xanthosine

guanosine

inosine

adenosine

dTDP

5,6-dihydrouracil

5,6-dihydrothymine

orotate

dCMP

uracil

dTMP

dCTP

dTTP

dCDP

CDP

dUDP

UTP

CTP

dUTP

dUMP

UDP

UDP-α-D-galactofuranose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-glucosamine 3'-phosphate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-glucose

UDP-α-D-galactose

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

UDP-α-D-xylose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

CDP-α-D-glucose

CDP-4-dehydro-6-deoxy-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

thymine

CMP

UMP

cytidine

uridine

thymidine

2'-deoxycytidine

2'-deoxyuridine

isoguanine

preQ₁

2',4,4',6'-tetrahydroxychalcone

baicalein

6,7-dehydrobaicalein

luteolin

coumarin

scopoletin

4-methylumbelliferone

preQ₀

lotaustralin

linamarin

neolinustatin

linustatin

taxiphyllin

2-hydroxy-2-methylpropanenitrile

(2R)-2-hydroxy-2-methylbutanenitrile

salicylaldehyde

3-hexaprenyl-4-hydroxybenzoate

4-tyrosol

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

urate

4-hydroxybenzoate

benzyl alcohol

3-methoxy-4-hydroxyphenylglycol

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

4-methylbenzaldehyde

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

2,6-dichlorohydroquinone

2,3,6-trichlorohydroquinone

menadiol

2,3,5,6-tetrachlorohydroquinone

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

2-aminophenol

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

2,3-dihydroxybenzoate

catechol

L-dopa

dopamine

coumarinate

salicylate

benzoate

4-aminobenzoate

4-methylbenzoate

3-oxo-dodecanoate

3-oxooctanoate

(3E)-2-oxohex-3-enedioate

chorismate

succinate

fumarate

L-aspartate

(S)-malate

3-(carbamoylamino)-2-methylpropanoate

cis-aconitate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

(2R,3S)-2-methylisocitrate

D-threo-isocitrate

(R)-3-hydroxybutanoate

(S)-lactate

(R)-lactate

propanoate

acetate

pyruvate

formate

butanoate

decanoate

octanoate

3-oxoadipate

3-oxohexanoate

(15Z)-tetracosenoate

oleate

(3E,5Z)-tetradecadienoate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

apo-4'-lycopenoate

phytenate

pristanate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

dinor-12-oxo-phytodienoate

palmitate

leukotriene-E4

leukotriene-D4

D-gluconate

(R)-pantoate

D-mannonate

4-deoxy-L-threo-hex-4-enopyranuronate

D-tagaturonate

aldehydo-D-galacturonate

aldehydo-D-glucuronate

β-D-glucuronate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

glyoxylate

2-oxoglutarate

2-oxobutanoate

carbamate

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

L-serine

creatine

β-alanine

(R)-3-amino-2-methylpropanoate

glycine

L-proline

L-leucine

L-alanine

L-glutamine

D-glutamate

L-glutamate

L-arginine

L-lysine

L-histidine

L-cysteine

L-tyrosine

L-asparagine

L-threonine

L-phenylalanine

L-tryptophan

cis-4-hydroxy-D-proline

D-alanine

2-hydroxy-5-oxoproline

S-sulfanyl-L-cysteine

L-2-amino-3-oxobutanoate

L-aspartyl-4-phosphate

3-phospho-L-serine

sarcosine

N-carbamoylglycine

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-(3-oxooctanoyl)-L-homoserine

N-(3-hydroxybutanoyl)-L-homoserine

N-(3-oxododecanoyl)-L-homoserine

N-(butyryl)-L-homoserine

N-(3-oxohexanoyl)-L-homoserine

N-(octanoyl)-L-homoserine

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

5-hydroxy-L-tryptophan

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

L-citrulline

L-isoleucine

L-valine

L-4-hydroxyglutamate semialdehyde

L-cystine

O-succinyl-L-homoserine

hypoglycin A

L-ornithine

S-adenosyl-L-methionine

L-homoserine

O-phospho-L-homoserine

S-sulfo-L-cysteine

L-aspartate 4-semialdehyde

L-glutamate-5-semialdehyde

S-adenosyl-L-homocysteine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-methionine

L-isoglutamine

L-2,4-diaminobutanoate

L-cystathionine

L,L-diaminopimelate

L-malic semialdehyde

methylglyoxal

diacetyl

6-hydroxypseudooxynicotine

dopaquinone

(R)-acetoin

glycolaldehyde

3-(N-morpholino)propanal

1-propanal

isobutanal

1-octanal

butan-1-al

formaldehyde

acetaldehyde

(S)-lactaldehyde

phytenal

L-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

aldehydo-D-mannose

β-D-mannopyranose

β-D-galactopyranose

α-D-galactopyranose

α-D-xylopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

aldehydo-L-arabinose

butan-1-ol

propan-1-ol

methanol

ethanol

phytol

glycerol

L-arabinitol

xylitol

D-mannitol

galactitol

L-iditol

D-sorbitol

(+)-neomenthol

(3R)-linalool

(3S)-linalool

myo-inositol

scyllo-inosose

1-amino-1-deoxy-scyllo-inositol

phytate

D-myo-inositol (1,2,3,5,6) pentakisphosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

1-oleoyl-sn-glycerol 3-phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

dioleoyl phosphatidate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

apo-4'-lycopenal

15-cis-phytoene

all-trans-phytoene

geranyl diphosphate

(-)-menthone

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(2E,6E)-farnesyl diphosphate

dammarenediol II

(3S)-2,3-epoxy-2,3-dihydrosqualene

brassicasterol

stigmasterol

sitosterol

3-nonaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-nonaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-decaprenyl diphosphate

geranylgeranyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

heptosyl-Kdo₂-lipid A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

heptosyl-Kdo₂-lipid IV_A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

leucodopachrome

betalamate

miraxanthin V

betanidin

betanidin quinone

5-dehydro-4-deoxy-D-glucuronate

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

raffinose

maltotriose

stachyose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

α-maltose

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl--D-galactosamine 6-sulfate

allolactose

melibiose

sucrose

α,α-trehalose

α-lactose

β-D-cellobiose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-galactosamine

N-acetyl-β-D-glucosamine

keto-L-sorbose

β-L-fucopyranose

α-L-fucopyranose

keto-D-fructose

β-D-fructofuranose

L-fuculose

D-xylulose

D-ribulose

L-ribulose

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

GDP-α-D-glucose

ADP-α-D-glucose

GDP-β-L-galactose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

β-D-fructose 1,6-bisphosphate

D-tagatofuranose 1,6-bisphosphate

D-fructose 6-phosphate

D-tagatofuranose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

L-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

aldehydo-D-arabinose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

L-fuculose 1-phosphate

L-rhamnulose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

L-idonate

L-gulonate

8-oxo-GTP

8-oxo-dGTP

ppGpp

pppGpp

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

5'-deoxyadenosine

cyclic-AMP

adenylo-succinate

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

reduced β-nicotinamide D-ribonucleotide

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

hypoglycin B

2-iminobutanoate

2-iminosuccinate

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine