an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

CO₂

selenophosphate

D-galactosamine-6-phosphate

H₂O

N-acetyl-D-galactosamine 6-phosphate

3-dehydroshikimate

shikimate

4-hydroxy-2-nonenal

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

4-imidazoleacetate

imidazole acetaldehyde

5-hydroxyindole acetate

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetaldehyde

propynoate

prop-2-ynal

D-glucurono-6,3-lactone

4-acetamidobutanoate

4-acetamidobutanal

dimethylsulfoniopropanoate

hydrogen peroxide

6-(2-amino-2-carboxyethyl)-7,8-dioxo-1,2,3,4,7,8-hexahydroquinoline 2,4-dicarboxylate

salicyl alcohol

methylsalicylate

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

ethanolamine

4-methyl-2-oxopentanoate

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

carbonic acid

glycerone phosphate

glycolate

2-phosphoglycolate

(R)-mandelate

(S)-mandelate

citrate

oxaloacetate

3-phosphooxypyruvate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

α-D-galactosyl-diphosphoundecaprenol

nicotinate adenine dinucleotide

lipid IV_A

lipid A disaccharide (E. coli)

urea

L-canavanine

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

carbamoyl phosphate

methylamine

ethylamine

N-ethylglycine

2-iminoacetate

adenosine 3',5'-bisphosphate

3-deoxy-α-D-manno-2-octulosonate

2-amino-2-deoxy-D-gluconate 6-phosphate

N-acetyl-D-muramate 6-phosphate

3-demethylubiquinol-6

arsenite

phosphoenolpyruvate

acetoacetate

oxalosuccinate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

L-arginino-succinate

canavaninosuccinate

(R)-piperazine-2-carboxylate

β-alaninamide

tert-butylamine

(indol-3-yl)acetamide

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

phenylglyoxylate

4-hydroxybenzaldehyde

2-(4-hydroxyphenyl)-2-oxoacetate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

5-guanidino-2-oxopentanoate

succinate semialdehyde

4-aminobutanoate

3-oxopropanoate

O-ureido-L-homoserine

xanthine

α-D-glucosamine 1-phosphate

5-amino-6-(D-ribitylamino)uracil

2,5-dihydroxypyridine

6-hydroxynicotinate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

thiamine diphosphate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(R)-4'-phosphopantothenate

(R)-pantothenate

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

(R)-1-amino-2-propanol O-2-phosphate

hydrogenobyrinate a,c-diamide

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

isopentenyl diphosphate

prenyl diphosphate

coproporphyrinogen III

(R)-1-aminopropan-2-ol

6-aminohexanoate

6-aminohexanoate linear dimer

(1R,2R)-1,2-diphenylethane-1,2-diol

cis-stilbene oxide

prephenate

porphobilinogen

5-aminolevulinate

S-methyl-5'-thioadenosine

2,3,5,6-tetracholorophenol

6-deoxyerythronolide B

N¹-(5-phospho-β-D-ribosyl)glycinamide

3-deoxy-D-arabino-heptulosonate 7-phosphate

5-phospho-β-D-ribosylamine

(R)-4'-phosphopantothenoyl-L-cysteine

phthalate 4,5-cis-dihydrodiol

phthalate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

2-C-methyl-D-erythritol 4-phosphate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

histidinol

histidinal

1,6-anhydro-N-acetyl-β-muramate

urocanate

4-pyridoxolactone

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

N-methylhydantoin

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

N-isopropylammelide

hydroxyatrazine

hydroxypyruvate

(2S)-2-isopropylmalate

γ-L-glutamyl 5-phosphate

3-ureidopropanoate

glutathionylspermidine

3-dehydroquinate

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

phosphonoacetate

3'-phosphoadenylyl-sulfate

3-deoxy-D-manno-octulosonate 8-phosphate

formamide

urea-1-carboxylate

6-aminohexanoate cyclic dimer

glutathione disulfide

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

N-(5-phosphoribosyl)-anthranilate

scytalone

isoquinolin-2(1H)-one

isoquinoline

2-keto-D-gluconate

O-acetyl-L-serine

hydrogenobyrinate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

lipid X

tartronate semialdehyde

2-(α-hydroxyethyl)thiamine diphosphate

S-acetyldihydrolipoamide

dihydrolipoamide

hydrogen selenide

N,N-dimethylaniline-N-oxide

N,N-dimethylaniline

nicotine-1'-N-oxide

dethiobiotin

8-amino-7-oxononanoate

pimeloyl-CoA

7,8-diaminopelargonate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

S-ribosyl-L-homocysteine

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

tropine

tropate

atropine

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

anthranilate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

(S)-dihydroorotate

orotidine 5'-phosphate

4'-phosphopantetheine

4-amino-4-deoxychorismate

coniferaldehyde

preuroporphyrinogen

L-histidinol phosphate

3-mercaptopyruvate

P¹,P⁴-bis(5'-guanosyl) tetraphosphate

4-methylsalicylate

5-methylsalicylate

(S)-2,3,4,5-tetrahydrodipicolinate

S-adenosyl 3-(methylsulfanyl)propylamine

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

2,5-didehydro-D-gluconate

3-hydroxyanthranilate

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

2-hydroxybiphenyl

benzylamine

N-benzylformamide

5-methoxyindoleacetaldehyde

5-methoxytryptamine

tryptamine

L-β-lysine

quinolinate

5-methylcytosine

creatinine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

S-formylglutathione

hypotaurine

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

propionamide

5-hydroxytryptophol

indole-3-glycol aldehyde

indole-3-glycol

isobutanol

3-methylbutanal

3-methylbutanol

2-methylbutanal

2-methylbutanol

2-phenylethanol

N-Formyl-L-kynurenine

2-dehydropantoate

cis-3-phenylcyclohexa-3,5-diene-1,2-diol

dimethylamine

N,N-Dimethylformamide

4-methyl-3-oxoadipate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

4-imidazolone-5-propanoate

oxalate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

(4-hydroxyphenyl)acetate

2-oxopent-4-enoate

(24R,25R)-3α,7α,24-trihydroxy-5β-cholestanoyl CoA

(24E)-3α,7α-dihydroxy-5β-cholest-24-enoyl-CoA

2-dehydro-3-deoxy-D-galactonate 6-phosphate

2-dehydro-3-deoxy-D-galactonate

diethylthiophosphate

dimethylthiophosphate

diethylphosphate

acetyl phosphate

iminodiacetate

nitrilotriacetate

5-carboxymethyl-2-hydroxymuconate

4-fumaryl-acetoacetate

(S)-ureidoglycolate

norspermidine

carboxynorspermidine

5-phospho-α-D-ribose 1,2-cyclic phosphate

α-D-ribose-1-methylphosphonate 5-phosphate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

DNA without lesion

nigerose

4-(γ-L-glutamylamino)butanal

γ-glutamyl-L-putrescine

presqualene diphosphate

squalene

prephytoene diphosphate

α-ribazole

chloramphenicol

pregn-5-ene-3,20-dione

pregn-5-ene-3,20-dione-17-ol

5-androstene-3,17-dione

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(4S)-4-hydroxy-2-oxoheptanedioate

chloroacetaldehyde

2-chloroethanol

3-methyl-2-butenal

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

2-maleylacetate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

2-hydroxy-5-carboxymethylmuconate semialdehyde

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

dialurate

4-oxoglutaramate

(2E)-2-hydroxypenta-2,4-dienoate

(3E)-2-oxopent-3-enoate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

4-oxalocrotonate

ammonia

bisorganyltrisulfane

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

carbon monoxide

γ-butyrobetaine

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

homogentisate

4-maleyl-acetoacetate

(3S,5S)-3,5-diaminohexanoate

(S)-5-amino-3-oxohexanoate

H₂

2-amino-3-carboxymuconate-6-semialdehyde

octopamine

(R)-synephrine

glutathioselenol

selenodiglutathione

2,6-dioxo-6-phenylhexa-3-enoate

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

4-amino-2-methyl-5-pyrimidinemethanol

protoanemonin

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

(S)-4-amino-5-oxopentanoate

3'-ketosucrose

3-hydroxypropanoate

autoinducer 2

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

2-dehydro-6-phospho-D-gluconate

adipate

6-oxohexanoate

isopropylamine

vanillin

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

3-hydroxy-2-methylpyridine-5-carboxylate

(2Z)-2-(acetamidomethylene)succinate

isochorismate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

1,4-dihydroxy-2-naphthoate

1,4-dihydroxy-2-naphthoyl-CoA

maleamate

N-formylmaleamate

4-guanidinobutyraldehyde

mercuriphenyl acetate

6-(2-amino-2-carboxylatoethyl)-1,2,3,4-tetrahydroquinoline-2,4-dicarboxylate

2-amino-4-[3-(2-amino-2-carboxylatoethyl)-6-oxocyclohexa-1,4-dien-1-yl]pentanedioate

2-amino-4-[5-(2-amino-2-carboxylatoethyl)-2-hydroxyphenyl]pentanedioate

6-(2-amino-2-carboxylatoethyl)-7-hydroxy-8-oxo-1,2,3,4,7,8-hexahydroquinoline-2,4-dicarboxylate

α-D-galacturonate 1-phosphate

L-dehydro-ascorbate

(2E,6E)-farnesyl diphosphate

pristanate

cyanophycin primer-L-aspartate

cyanophycin primer

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

(S)-nipecotate

2-iminobutanoate

2-iminopropanoate

2-iminosuccinate

4-[(2Z)-2-(methylimino)ethyl]phenol

4-(2-iminoethyl)phenol

L-kynurenine

L-α-amino-ε-keto-pimelate

L-leucine

glycine

L-proline

L-isoleucine

L-valine

L-phenylalanine

L-alanine

L-tryptophan

L-selenocysteine

L-methionine

L-cysteine

L-aspartyl-4-phosphate

L-glutamate

L-2,4-diaminobutanoate

L-serine

L-ornithine

L-arginine

L-glutamine

L-aspartate

L-lysine

L-threonine

L-histidine

L-asparagine

L,L-diaminopimelate

L-tyrosine

L-isoglutamine

L-cystathionine

N-carbamoyl-L-aspartate

N⁶-acetyl-N⁶-hydroxy-L-lysine

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

L-citrulline

L-aspartate 4-semialdehyde

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-canaline

L-homocysteine

L-homoserine

S-sulfo-L-cysteine

O-phospho-L-homoserine

O-succinyl-L-homoserine

L-glutamate-5-semialdehyde

D-allothreonine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-saccharopine

L-selenomethionine

seleno-L-homocysteine

O-acetyl-L-homoserine

cis-4-hydroxy-D-proline

(3R)-3-hydroxy-D-aspartate

(3S)-3-hydroxy-D-aspartate

3-hydroxy-L-kynurenine

trans-4-hydroxy-L-proline

N⁶-hydroxy-L-lysine

N-carbamoylglycine

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

L-threonine 3-O-phosphate

3-phospho-L-serine

D-glutamate

D-alanine

D-proline

D-threonine

D-aspartate

D-serine

D-cysteine

N-carbamoylsarcosine

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

ADP

ATP

AMP

GTP

XMP

IMP

GMP

GDP

2'-deoxyguanosine

dGTP

hypoxanthine

cyclic-AMP

2'-deoxyadenosine

2'-deoxyinosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

adenylo-succinate

dADP

dGDP

1-(5-phospho-β-D-ribosyl)-AMP

guanosine 3'-monophosphate

adenosine 3'-monophosphate

dATP

ITP

IDP

dITP

dIDP

ppGpp

pppGpp

5'-deoxyadenosine

dAMP

dGMP

1-(5-phospho-β-D-ribosyl)-ATP

isoguanine

8-oxo-dGTP

8-oxo-GTP

5,6-dihydrouracil

5,6-dihydrothymine

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

GDP-α-D-mannose

GDP-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

dTDP-β-L-rhamnose

dTDP-β-L-mycarose

dTDP-D-desosamine

UDP-α-D-glucose

UDP-α-D-sulfoquinovopyranose

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-α-D-glucuronate

UDP-β-L-iduronate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

adenine

guanine

thymine

uracil

cytosine

preQ₁

N¹-ethyladenine

N3-methylcytosine

N¹-methyladenine

cyclic di-3',5'-guanylate

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

dTMP

dUMP

dCMP

dCDP

dUDP

dTDP

dTTP

dUTP

dCTP

UDP

CDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

2-hydroxy-dATP

5-hydroxy-CMP

5-hydroxy-CTP

NAD⁺

NADP⁺

NADH

NADPH

uridine 3'-monophosphate

cytidine-3'-monophosphate

2'-deoxyuridine

2'-deoxycytidine

thymidine

adenosine

xanthosine

inosine

guanosine

uridine

cytidine

5-fluorouracil

5'-deoxy-5'-fluoroadenosine

5-fluorocytosine

D-gluconate

D-galactonate

L-gluconate

D-idonate

L-gulonate

aldehydo-L-galactonate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3-dehydro-D-glucopyranose

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

L-fuculose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

β-D-fructofuranose

keto-D-fructose

keto-L-sorbose

glycolaldehyde

aldehydo-D-ribose

β-D-ribopyranose

α-D-ribofuranose

β-D-ribofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

D-ribulose

D-xylulose

L-ribulose

L-glucose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

glycerol

D-sorbitol

D-ribitol

α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

sucrose

aldehydo-D-galacturonate

salicylaldehyde

all-trans-retinol

all-trans-retinyl palmitate

3-oxo-24-ethyl-cholest-5-ene

sitosterol

3-oxo-24-ethyl-cholest-4-ene

3-oxo-24-ethyl-26-hydroxy-cholest-4-ene

3-oxo-24-ethyl-cholest-4-en-26-oyl-CoA

3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-(isopropanoyl)-cholest-4,24-dien-26-oyl-CoA

3,24-dioxo-cholest-4-en-26-oate

3-oxo-24-ethyl-cholest-4-en-26-oate

3-oxo-24-ethyl-26-al-cholest-4-ene

(3S)-2,3-epoxy-2,3-dihydrosqualene

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

geranyl diphosphate

apo-4'-lycopenal

torulene

crocetin dialdehyde

4'-apo-β-carotenal

all-trans-phytoene

15-cis-phytoene

all-trans-3,4-didehydrolycopene

crocetin

erythromycin D

3-α-mycarosylerythronolide B

aerobactin

N¹-citryl-N⁶-acetyl-N⁶-hydroxy-L-lysine

ferric-enterobactin complex

iron(III) dicitrate

erythronolide B

(S)-nicotine

betanidin quinone

betanidin

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-decaprenyl diphosphate

geranylgeranyl diphosphate

3-nonaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1-oleoyl-2-lyso-glycerone phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

1,2-dibutyrin

tributyrin

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetate

protocatechuate

4-methylcatechol

4-chlorocatechol

catechol

(R)-noradrenaline

(R)-adrenaline

dopamine

3,4-dihydroxyphenylglycol

3-sulfocatechol

biphenyl-2,3-diol

1-octanol

ethanol

propan-1-ol

phytol

butan-1-ol

methanol

(2E,6E)-farnesal

3-(N-morpholino)propanal

fluoroacetaldehyde

methylglyoxal

benzaldehyde

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

4-nitrobenzaldehyde

phytenal

(S)-lactaldehyde

(R)-lactaldehyde

acetaldehyde

1-octanal

formaldehyde

1-propanal

isobutanal

butan-1-al

pyrroloquinoline quinone

menadione

caldariellaquinone

diacetyl

a coenzyme-A group

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

pyruvate

2-oxoglutarate

glyoxylate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

vanillate

4-aminobenzoate

benzoate

acetate

orotate

(R)-pantoate

allantoate

L-carnitine

5-dehydro-L-gluconate

fluoroacetate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

octanoate

palmitate

butanoate

decanoate

stearate

oleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

linoleate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

(2E,6E)-farnesoate

leukotriene-E4

leukotriene-D4

3-oxoadipate

formate

propanoate

(R)-lactate

(S)-lactate

(2R,3S)-2-methylisocitrate

(R)-glycerate

(R)-3-hydroxybutanoate

cis-aconitate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

chorismate

(3E)-2-oxohex-3-enedioate

D-glucarate

succinate

fumarate

maleate

(S)-malate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-hydroxybenzoate

urate

1,3,6,8-naphthalenetetrol

4-tyrosol

biphenyl

flaviolin

cyanuric acid

benzene

ferulate

6,7-dehydrobaicalein

baicalein

pentachlorophenol

4-chlorosalicylate

5-chlorosalicylate

2-phenylethylamine

tyramine

serotonin

phenol

4-nitrobenzyl alcohol

4-aminophenol

4-nitrophenol

4-methylphenol

2,3,5,6-tetrachlorohydroquinone

menadiol

2,3,6-trichlorohydroquinone

2,6-dichlorohydroquinone

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-9

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

demethylmenaquinol-8

menaquinol-8

ubiquinol-9

ubiquinol-8

ubiquinol-6

ubiquinol-7

ubiquinol-10

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

amino-parathion

parathion

methyl parathion

vanillyl mandelate

normetanephrine

metanephrine

3-methoxy-4-hydroxyphenylglycol

atrazine

hydrogen cyanide

(indole-3-yl)acetonitrile

preQ₀

acrylonitrile

7,8-dihydrolumazine

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin 3'-phosphate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

FMN

FAD

riboflavin

FMNH₂

FADH₂

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

hydantoin

cob(I)alamin

adenosylcobalamin

sirohydrochlorin

cobyrinate

cobalt-precorrin-2

precorrin-2

cobalt-precorrin-3

precorrin-4

precorrin-3B

precorrin-6A

precorrin-6B

precorrin-8x

precorrin-7

precorrin-5

precorrin-1

precorrin-3A

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

nicotinate

nicotinamide

L-ascorbate

thiamine

pyridoxine 5'-phosphate

pyridoxine

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxal 5'-phosphate

pyridoxal

4-pyridoxate

coenzyme A

(R)-NADHX

(S)-NADHX

glycine betaine

D-glucono-1,5-lactone

L-glucono-1,5-lactone

D-galactono-1,4-lactone

trans-dienelactone

cis-dienelactone

L-galactono-1,4-lactone

3'-dephospho-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

2-methylbutanoyl-CoA

isobutanoyl-CoA

isovaleryl-CoA

acetyl-CoA

malonyl-CoA

succinyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

(E)-glutaconyl-CoA

(3S)-citryl-CoA

4-hydroxybenzoyl-CoA

3-methylcrotonyl-CoA

3-methylglutaconyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

trans-feruloyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

phenylacetyl-CoA

2-methylacetoacetyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

oxalyl-CoA

formyl-CoA

(24E)-3α,7α,12α-trihydroxy-5β-cholest-24-enoyl-CoA

(24R,25R)-3α,7α,12α,24-tetrahydroxy-5β-cholestanoyl CoA

crotonobetainyl-CoA

L-carnitinyl-CoA

dihomo γ-linolenoyl-CoA

γ-butyrobetainyl-CoA

(S)-3-aminobutanoyl-CoA

acryloyl-CoA

3-hydroxypropanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxooctadecanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

hexadecanedioyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

octanoyl-CoA

lauroyl-CoA

decanoyl-CoA

hexanoyl-CoA

butanoyl-CoA

propanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

androsterone

pregnenolone

testosterone

progesterone

campest-4-en-3-one

ethene

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

phenylacetate

(+)-7-epi-jasmonate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3-oxocholest-4,24-dien-26-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

(25S)-26-oxocholest-4-en-3-one

(25S)-26-hydroxycholest-4-en-3-one

cholest-4-en-3-one

17-α-hydroxypregnenolone

cholest-5-en-3-one

cholesterol

3-β-hydroxyandrost-5-en-17-one

cholate

glycocholate

isocholate

3-dehydrocholate

campest-4-en-3β-ol

5α-androstane-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

methane

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

(R)-piperidine-3-carboxamide

(R)-piperazine-2-tert-butylcarboxamide

(R)-piperazine-2-carboxamide

(S)-(+)-allantoin

6-caprolactam

acetamide

(S)-2-chloropropanoate

3-chloro-cis,cis-muconate

2-chloromaleylacetate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

sn-glycero-3-phosphocholine

betaine aldehyde hydrate

choline sulfate

betaine aldehyde

choline

agmatine

spermidine

putrescine

N-acetylputrescine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

4-[(E)-2-(methylamino)ethenyl]phenol

4-[(Z)-2-aminoethenyl]phenol

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

hydrogensulfite

hydrogencarbonate

molybdate

superoxide

phosphonate

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

Zn²⁺

Mg²⁺

Ca²⁺

Cu²⁺

Ni²⁺

Fe²⁺

Co²⁺

Hg²⁺

ammonium

K⁺

Na⁺

H⁺

S-(hydroxymethyl)glutathione

3-dimethylsulfoniopropionaldehyde

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

sulfoacetaldehyde

taurine

2-sulfinoacetaldehyde

orthanilate

3-(N-morpholino)propanesulfonate

isethionate

1-butanesulfonate

methanesulfonate