an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

coproporphyrinogen III

(4-hydroxyphenyl)acetate

N-acetyl-D-muramate 6-phosphate

dihydroxyacetone

2-amino-2-deoxy-D-gluconate 6-phosphate

N-succinyl-L,L-2,6-diaminopimelate

carbamoyl phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

acetoacetate

lipid IV_A

1-deoxy-L-glycero-tetrulose 4-phosphate

arsenite

β-nicotinate D-ribonucleotide

quinolinate

5-phospho-β-D-ribosylamine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-phosphooxy-L-threonine

3-amino-1-hydroxyacetone 1-phosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(D-ribitylamino)uracil

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

S-formylglutathione

2-(α-hydroxyethyl)thiamine diphosphate

dihydrolipoamide

S-acetyldihydrolipoamide

L-selenocystathionine

lipid X

lipid A disaccharide (E. coli)

citrate

N-(5-phosphoribosyl)-anthranilate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

oxalosuccinate

nicotinate adenine dinucleotide

3-deoxy-D-arabino-heptulosonate 7-phosphate

glutathione disulfide

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

(indol-3-yl)acetamide

butyramide

propionamide

acrylamide

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

glycerone phosphate

D-gluconate 6-phosphate

anthranilate

2-phosphoglycolate

glycolate

3-phosphooxypyruvate

α-D-glucosamine 1-phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

cis-coumarinic acid-β-D-glucoside

scopolin

4-hydroxybenzaldehyde

4-methylumbelliferyl glucoside

(2-hydroxyphenyl)acetate

homogentisate

ethanolamine

5-aminolevulinate

L-canavanine

urea

preuroporphyrinogen

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropylmalate

thiamine diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

oxaloacetate

L-quinate

3-dehydroquinate

3-dehydroshikimate

hydrogen peroxide

nicotine-1'-N-oxide

N,N-dimethylaniline

N,N-dimethylaniline-N-oxide

xanthine

shikimate

H₂O

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

3-methyl-2-oxobutanoate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

phosphoenolpyruvate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

orotidine 5'-phosphate

O-acetyl-L-serine

hydrogen selenide

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

4'-phosphopantetheine

CO₂

β-D-ribosylnicotinate

histidinol

3-methylbenzyl alcohol

3-methylbenzaldehyde

4-methylbenzyl alcohol

4-(γ-L-glutamylamino)butanoate

creatinine

4-fumaryl-acetoacetate

4-maleyl-acetoacetate

2-C-methyl-D-erythritol 4-phosphate

carbon monoxide

itaconate

porphobilinogen

γ-L-glutamyl 5-phosphate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

L-arginino-succinate

O-ureido-L-homoserine

canavaninosuccinate

adenosine 3',5'-bisphosphate

1-piperideine 6-carboxylate

(S)-2-amino-6-oxohexanoate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

(S)-4-hydroxy-2-oxopentanoate

(R)-pantothenate

D-erythro-imidazole-glycerol-phosphate

3-ureidopropanoate

L-dehydro-ascorbate

methylamine

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

3-deoxy-α-D-manno-2-octulosonate

prephenate

L-dopachrome

ammonia

DNA without lesion

N²-succinylglutamate

theophylline

1,3-dimethylurate

3-methylxanthine

3-methylurate

1-methylxanthine

5-deoxy-α-ribose 1-phosphate

1-methylurate

S-ribosyl-L-homocysteine

4-amino-2-methyl-5-pyrimidinemethanol

4-hydroxy-2-nonenal

5-dehydro-2-deoxy-D-gluconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

4-amino-4-deoxychorismate

1,4-dihydroxy-2-naphthoyl-CoA

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

isochorismate

selenodiglutathione

glutathioselenol

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

2,3-didehydroadipyl-CoA

(2Z)-2-(acetamidomethylene)succinate

3-hydroxy-2-methylpyridine-5-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

1,4-dihydroxy-2-naphthoate

N⁵-carboxyaminoimidazole ribonucleotide

2-amino-3-carboxymuconate-6-semialdehyde

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

butanoyl phosphate

hydroxyatrazine

4-(γ-L-glutamylamino)butanal

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

autoinducer 2

2-oxopent-4-enoate

pseudouridine

2-dehydro-6-phospho-D-gluconate

isopentenyl diphosphate

prenyl diphosphate

3'-ketosucrose

mercuriphenyl acetate

(S)-5-amino-3-oxohexanoate

(3S,5S)-3,5-diaminohexanoate

dialurate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

dethiobiotin

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

(2S)-4-acetamido-2-aminobutanoate

ectoine

propan-2-ol

pimeloyl-CoA

imidazole acetol-phosphate

L-histidinol phosphate

2-phenylethanol

2-methylbutanol

2-methylbutanal

3-methylbutanol

3-methylbutanal

isobutanol

indole-3-glycol

indole-3-glycol aldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

(R)-2,3-dihydroxy-3-methylpentanoate

3-deoxy-D-glycero-2,5-hexodiulosonate

L-gulono-1,4-lactone

2-keto-L-gulonate

selenophosphate

5-methylcytosine

3''-adenylylstreptomycin

(1R,2R)-cyclohexa-3,5-diene-1,2-diol

(S)-4-amino-5-oxopentanoate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

S-methyl-5'-thioadenosine

(2S)-2-{[1-(R)-carboxyethyl]amino}pentanoate

2-dehydro-3-deoxy-D-galactonate

cis-stilbene oxide

(1R,2R)-1,2-diphenylethane-1,2-diol

4-pyridoxolactone

2-keto-D-gluconate

2,5-didehydro-D-gluconate

aminoacetone

5-dehydro-4-deoxy-D-glucarate

2,5-dioxopentanoate

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

4-methylmuconolactone

isoquinoline

isoquinolin-2(1H)-one

phthalate

phthalate 4,5-cis-dihydrodiol

carboxynorspermidine

norspermidine

5-(methylsulfanyl)-ribulose 1-phosphate

N-ethylglycine

ethylamine

2-iminoacetate

3-hydroxypropanoate

atropine

tropate

tropine

5-dehydro-D-gluconate

hydroxypyruvate

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

(R)-6-hydroxynicotine

2,3,5,6-tetracholorophenol

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

3-keto-β-D-galactose

N6'-acetylkanamycin-B

phosphonoacetate

L-β-lysine

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

5-oxo-L-proline

(S)-5-hydroxyisourate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

carbonic acid

(S)-ureidoglycolate

(S)-mandelate

(R)-mandelate

oxalate

2-oxoglutaramate

α-D-galactosyl-diphosphoundecaprenol

salicyl alcohol

methylsalicylate

N-succinyl-2-amino-6-ketopimelate

histidinal

cyclopentanol

cyclopentanone

2-maleylacetate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

(L-threonylcarbamoyl)adenylate

(E)-3-(methoxycarbonyl)pent-2-enedioate

propanoyl phosphate

α-D-glucopyranosyl-diphosphoundecaprenol

chloramphenicol

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

N-(2,3-dihydroxybenzoyl)-L-serine trimer

3-deoxy-D-manno-octulosonate 8-phosphate

nigerose

squalene

presqualene diphosphate

prephytoene diphosphate

3-mercaptopyruvate

3α,7α-dihydroxy-24-oxo-5β-cholestanoyl CoA

3-phosphonopyruvate

(S)-2,3,4,5-tetrahydrodipicolinate

1,6-anhydro-N-acetyl-β-muramate

pseudouridine 5'-phosphate

2-oleoylglycerol

5,6-dimethylbenzimidazole

α-ribazole

α-ribazole 5'-phosphate

(R)-1-amino-2-propanol O-2-phosphate

formamide

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

2-dehydro-3-deoxy-D-gluconate

5-(methylsulfanyl)-α-D-ribose

S-methyl-5-thio-α-D-ribose 1-phosphate

indole-3-ethanol

4-methyl-3-oxoadipate-enol-lactone

4-methyl-3-oxoadipate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

tartronate semialdehyde

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

acetyl phosphate

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

benzoylsuccinyl-CoA

3-oxopropanoate

4-aminobutanoate

succinate semialdehyde

4-imidazolone-5-propanoate

urocanate

2-dehydropantoate

(S)-dihydroorotate

N²-succinyl-L-glutamate 5-semialdehyde

4-acetamidobutanal

4-acetamidobutanoate

γ-glutamyl-L-putrescine

N-isopropylammelide

isopropylamine

S-Inosyl-L-homocysteine

(5S)-5-benzyl-hydantoin

(5R)-5-benzyl-hydantoin

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

propane-1,3-diamine

sym-homospermidine

meso-tartrate

2-hydroxy-3-oxosuccinate

L-tartrate

H₂

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

enol-phenylpyruvate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

bisorganyltrisulfane

5,6-dihydroxyindole

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

1-pyrroline

4-oxoglutaramate

(2E,6E)-farnesyl diphosphate

pristanate

2-iminosuccinate

2-iminopropanoate

2-iminobutanoate

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-homocysteine

4-methylphenol

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

superoxide

nitric oxide

monodehydroascorbate radical

hydroxyl radical

4-nitrophenyl phosphate

4-nitrophenol

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

4-nitrobenzyl alcohol

4-nitrobenzaldehyde

chloramphenicol 3-acetate

N-acetyl-β-neuraminate

S-(hydroxymethyl)glutathione

dimethyl sulfide

methionol

3-(methylsulfanyl)propanal

glutathione

thiocyanate

methanethiol

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

taurine

L-cysteate

3-sulfopyruvate

sulfoacetaldehyde

(R)-S-lactoylglutathione

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

chloride

phosphonate

phosphate

triphosphate

diphosphate

Fe³⁺

Co²⁺

Cu²⁺

Hg²⁺

Ni²⁺

Mg²⁺

Fe²⁺

ammonium

K⁺

H⁺

glycine betaine

betaine aldehyde hydrate

choline sulfate

betaine aldehyde

choline

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

4-aminobutanal

spermidine

putrescine

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphocholine

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

fluoroacetaldehyde

fluoroacetate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

2-chloromaleylacetate

2-chloro-5-methyl-maleylacetate

3-chloro-2-methyl-dienelactone

3-chloro-2-methyl-maleylacetate

3-chloro-cis,cis-muconate

2-chloro-5-methyl-dienelactone

3,5-dichloro-2-methyl-muconate

3,5-dichloro-2-methyl-muconolactone

2-chloroacetate

3-chlorobenzyl alcohol

3-chlorobenzaldehyde

2,4-dichlorotoluene

(1R,2S)-4,6-dichloro-3-methylcyclohexa-3,5-diene-1,2-diol

4,6-dichloro-3-methylcatechol

pentachlorophenol

allantoate

acetamide

(S)-(+)-allantoin

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-4-imidazolecarboxyamide

nicotinamide

ethene

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

(+)-7-epi-jasmonate

(indol-3-yl)acetate

phenylacetate

methyl (indol-3-yl)acetate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

adenosylcobalamin

cob(I)alamin

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

Mg-protoporphyrin

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

protochlorophyllide a

cobalt-factor III

cobalt-precorrin-3

cobalt-sirohydrochlorin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

cobalt-precorrin-4

cobalt-precorrin-5A

adenosylcobalamin 5'-phosphate

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

adenosylcobyrate

protoheme

hydrogen cyanide

N₂

protoporphyrinogen IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrin IX

siroheme

S⁰

oxygen

hydrogen sulfide

Hg⁰

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

malonyl-CoA

3'-dephospho-CoA

succinyl-CoA

acetyl-CoA

isobutanoyl-CoA

2-methylbutanoyl-CoA

isovaleryl-CoA

itaconyl-CoA

(3S)-citryl-CoA

dihomo γ-linolenoyl-CoA

(+)-7-epi-jasmonoyl-CoA

methylacrylyl-CoA

(2E,5Z)-tetradecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

(3S)-hydroxyadipyl-CoA

(S)-3-aminobutanoyl-CoA

acryloyl-CoA

phenylacetyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

2-methylacetoacetyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

4-hydroxybenzoyl-CoA

4-cis-undecenoyl-CoA

4-trans-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

(3E)-dec-3-enoyl-CoA

3-hydroxypropanoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

(E)-glutaconyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3-methylglutaconyl-CoA

formyl-CoA

oxalyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

3-methylcrotonyl-CoA

3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA

choloyl-CoA

chenodeoxycholoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-octadec-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

phytanoyl-CoA

(S)-malyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

butanoyl-CoA

lauroyl-CoA

hexanoyl-CoA

decanoyl-CoA

octanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxododecanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

3-oxooctadecanoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

all-trans-retinyl palmitate

cis-dienelactone

trans-dienelactone

D-galactono-1,4-lactone

D-glucono-1,5-lactone

FMN

FADH₂

FAD

FMNH₂

(S)-NADHX

(R)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

ubiquinol-8

menaquinol-8

menaquinol-6

menaquinol-7

demethylmenaquinol-8

demethylmenaquinol-6

demethylmenaquinol-7

3-demethylubiquinol-8

sn-glycerol 3-phosphate

2,3-diphospho-D-glycerate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

N-acetyl-D-mannosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

1-oleoyl-2-lyso-glycerone phosphate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

coenzyme A

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

L-ascorbate

riboflavin

thiamine

nicotinate

pyridoxal

pyridoxal 5'-phosphate

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine

pyridoxine 5'-phosphate

4-pyridoxate

menadione

all-trans-retinol

(S)-1-pyrroline-5-carboxylate

precorrin-4

precorrin-5

precorrin-6B

precorrin-6A

precorrin-7

precorrin-2

precorrin-8x

precorrin-3A

precorrin-3B

precorrin-1

sirohydrochlorin

hydantoin

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin 2',3'-cyclic phosphate

7,8-dihydropterin

7,8-dihydropteroate

guanine

adenine

2'-deoxyinosine

2'-deoxyguanosine

2'-deoxyadenosine

xanthosine

guanosine

inosine

adenosine

hypoxanthine

dAMP

dGMP

dGTP

dATP

dITP

dGDP

dADP

dIDP

GDP

ADP

IDP

XMP

IMP

GMP

AMP

GTP

ATP

ITP

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

orotate

dCDP

dUDP

UDP

CDP

UTP

uracil

CTP

5,6-dihydrouracil

5,6-dihydrothymine

dCMP

dUTP

dUMP

cytosine

dCTP

dTDP

uridine 3'-monophosphate

cytidine-3'-monophosphate

dTTP

dTMP

UDP-α-D-galactose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-β-L-iduronate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-galactofuranose

UDP-α-D-sulfoquinovopyranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

UDP-α-D-xylose

dTDP-α-D-glucose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-D-paratose

CDP-α-tyvelose

CDP-4-dehydro-6-deoxy-α-D-glucose

CDP-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

5-fluorouracil

cytidine

uridine

2'-deoxycytidine

2'-deoxyuridine

thymidine

thymine

UMP

CMP

isoguanine

preQ₁

baicalein

6,7-dehydrobaicalein

scopoletin

coumarin

4-methylumbelliferone

(indole-3-yl)acetonitrile

propionitrile

3-cyanopyridine

acrylonitrile

lotaustralin

linamarin

neolinustatin

linustatin

taxiphyllin

preQ₀

2-hydroxy-2-methylpropanenitrile

(2R)-2-hydroxy-2-methylbutanenitrile

n-butyronitrile

benzyl alcohol

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

salicylaldehyde

benzene

4-tyrosol

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

4-hydroxybenzoate

urate

cyanuric acid

atrazine

3-methoxy-4-hydroxyphenylglycol

benzaldehyde

4-methylbenzaldehyde

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

2,6-dichlorohydroquinone

2,3,6-trichlorohydroquinone

menadiol

hydroquinone

2,3,5,6-tetrachlorohydroquinone

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

phenol

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

L-dopa

catechol

protocatechuate

coumarinate

salicylate

4-aminobenzoate

benzoate

4-methylbenzoate

L-2-aminoadipate

L-α-amino-ε-keto-pimelate

L-threonine

L-glutamine

L-serine

glycine

L-tyrosine

L-asparagine

L-cysteine

L-arginine

L-lysine

L-histidine

L-aspartate

L-glutamate

L-tryptophan

L-phenylalanine

D-alanine

D-glutamate

D-proline

cis-4-hydroxy-D-proline

D-aspartate

seleno-L-homocysteine

L-2-amino-3-oxobutanoate

L-aspartyl-4-phosphate

L-saccharopine

D-nopaline

2-hydroxy-5-oxoproline

L-threonine 3-O-phosphate

3-phospho-L-serine

sarcosine

N-carbamoylglycine

N-formyl-L-glutamate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-aspartate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

creatine

β-alanine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

L-alanine

L-proline

L-leucine

L-norvaline

L-citrulline

O-phospho-L-homoserine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-canaline

L-ornithine

L-aspartate 4-semialdehyde

S-sulfo-L-cysteine

L-homoserine

O-succinyl-L-homoserine

L-glutamate-5-semialdehyde

hypoglycin A

1-aminocyclopropane-1-carboxylate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-valine

L-isoleucine

L-methionine

L,L-diaminopimelate

L-cystathionine

L-2,4-diaminobutanoate

L-isoglutamine

chorismate

3-methyl-cis,cis-muconate

(3E)-2-oxohex-3-enedioate

succinate

fumarate

(S)-malate

D-glucarate

3-(carbamoylamino)-2-methylpropanoate

cis-aconitate

(2R,3S)-2-methylisocitrate

trans-aconitate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

3-carboxy-cis,cis-muconate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

D-threo-isocitrate

(R)-2-hydroxybutanoate

(R)-3-hydroxybutanoate

(R)-lactate

(S)-lactate

pyruvate

acetate

formate

propanoate

butanoate

decanoate

octanoate

3-oxoadipate

(15Z)-tetracosenoate

oleate

(3E,5Z)-tetradecadienoate

apo-4'-lycopenoate

di-homo-γ-linolenate

γ-linolenate

linoleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

phytenate

stearate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

dinor-12-oxo-phytodienoate

palmitate

D-gluconate

D-mannonate

(R)-pantoate

5-deoxy-D-glucuronate

D-tagaturonate

aldehydo-D-glucuronate

aldehydo-D-galacturonate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

2-oxobutanoate

glyoxylate

2-oxoglutarate

4-(methylsulfanyl)-2-oxobutanoate

(R)-4-hydroxy-4-methyl-2-oxoglutarate

a coenzyme-A group

methylglyoxal

diacetyl

acetone

6-hydroxypseudooxynicotine

pyrroloquinoline quinone

dopaquinone

glycolaldehyde

acetaldehyde

formaldehyde

butan-1-al

isobutanal

1-propanal

1-octanal

(R)-lactaldehyde

(S)-lactaldehyde

phytenal

L-glyceraldehyde

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

aldehydo-D-mannose

β-D-mannopyranose

β-D-ribopyranose

α-D-galactopyranose

β-D-galactopyranose

L-sorbosone

α-L-rhamnopyranose

β-L-rhamnopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

aldehydo-L-arabinose

butan-1-ol

propan-1-ol

methanol

ethanol

phytol

glycerol

D-threitol

L-arabinitol

xylitol

D-sorbitol

galactitol

D-mannitol

L-iditol

galactitol 1-phosphate

(3R)-linalool

(3S)-linalool

sphinganine (C20)

3-dehydrosphinganine (C20)

3-dehydrosphinganine

D-erythro-sphinganine

L-threo-sphinganine

myo-inositol

1D-chiro-inositol

scyllo-inositol

scyllo-inosose

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1-keto-D-chiro-inositol

1-amino-1-deoxy-scyllo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

di-trans,octa-cis-undecaprenyl phosphate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

geranylgeranyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

apo-4'-lycopenal

15-cis-phytoene

all-trans-phytoene

(3S)-2,3-epoxy-2,3-dihydrosqualene

3-octaprenyl-4-hydroxybenzoate

(S)-nicotine

leucodopachrome

betanidin

betanidin quinone

iron(III) dicitrate

ferric-enterobactin complex

ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex

streptomycin

kanamycin B

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

maltotriose

raffinose

maltotetraose

stachyose

maltoheptaose

maltohexaose

maltopentaose

sucrose

melibiose

allolactose

α,α-trehalose

α-lactose

β-D-cellobiose

keto-L-sorbose

keto-D-fructose

D-erythrulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

L-sorbosone 1,4-lactone

L-sorbosone 2,6-lactone

β-D-fructofuranose

D-xylulose

D-ribulose

L-ribulose

3-dehydro-D-glucopyranose

3'-ketolactose

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

N,N'-diacetylchitobiose 6'-phosphate

sucrose 6^F-phosphate

N-monoacetylchitobiose 6'-phosphate

α,α-trehalose 6-phosphate

β-D-cellobiose 6'-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

GDP-α-D-glucose

ADP-α-D-glucose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

D-sedoheptulose 1,7-bisphosphate

D-tagatofuranose 1,6-bisphosphate