an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

3-deoxy-α-D-manno-2-octulosonate

1,4-dihydroxy-2-naphthoate

porphobilinogen

dimethylsulfoniopropanoate

S-acetyldihydrolipoamide

aminoacrylate

1,2-dichloroethane

3-oxopropanoate

(2-hydroxyphenyl)acetate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

shikimate

L-selenocystathionine

3-maleylpyruvate

core oligosaccharide-lipid A (E. coli K-12 core type)

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

4-methylsalicylate

cyclohexanone

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

1,4-dihydroxy-2-naphthoyl-CoA

2-dehydropantoate

5,6-dihydroxyindole

1-piperideine 6-carboxylate

(Z)-3-peroxyaminoacrylate

scytalone

pyruvic oxime

acetoacetate

(S)-2-acetolactate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

4-hydroxybenzaldehyde

O-ureido-L-homoserine

(25S)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

5,6-dimethylbenzimidazole

4-aminobutanoate

H₂O

4-oxoglutaramate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

indole-3-glycol aldehyde

(2S)-2-isopropyl-3-oxosuccinate

hydroxylamine

S-methyl-5-thio-α-D-ribose 1-phosphate

2-succinylbenzoate

2-dehydro-3-deoxy-D-gluconate

N²-succinyl-L-glutamate 5-semialdehyde

2-hydroxy-3-oxosuccinate

aminoacetone

glutathione disulfide

4-coumaraldehyde

nicotinate adenine dinucleotide

indole-3-glycol

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

citrate

5-(methylsulfanyl)-ribulose 1-phosphate

cyclic-2,3-O-oxalyl-L-threonate

3-methoxy-4-hydroxyphenylglycolaldehyde

pseudouridine 5'-phosphate

(2R,3S)-3-isopropylmalate

dimethylamine

autoinducer 2

meso-tartrate

L-threonate

1-(methylsulfanyl)xylulose 5-phosphate

2-isopropylmaleate

thiamine phosphate

carbon monoxide

4-fumaryl-acetoacetate

2,3-dioxo-L-gulonate

(S)-2-aceto-2-hydroxybutanoate

S-ribosyl-L-homocysteine

(2S)-2-isopropylmalate

N-succinyl-L,L-2,6-diaminopimelate

(E)-glutaconate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

6-phospho D-glucono-1,5-lactone

2-aminomalonate semialdehyde

5-oxo-L-proline

2,3-didehydroadipyl-CoA

L-dopachrome

3-phosphooxypyruvate

L-arabinonate

oxaloacetate

1,2,4-trichlorobenzene

N-Formyl-L-kynurenine

L-xylo-hex-3-ulono-1,4-lactone

coproporphyrinogen III

γ-butyrobetaine

2-methyl-4-chlorophenol

(indol-3 yl)acetyl-CoA

3-methyl-2-oxobutanoate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

L-arabinono-1,4-lactone

L-tartrate

D-gluconate 6-phosphate

(indol-3-yl)pyruvate

hydrogen peroxide

cyclic- 3,4-O-oxalyl-L-threonate

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

2-aminoacetaldehyde

4-imidazoleacetate

5-hydroxytryptophol

2,5-didehydro-D-gluconate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N-succinyl-2-amino-6-ketopimelate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

2-carboxy-L-xylonolactone

L-dehydro-ascorbate

4-acetamidobutanoate

hydrogen selenide

3-amino-1-hydroxyacetone 1-phosphate

ammonia

3-hydroxy-3-phenylpropanoyl-CoA

enol-phenylpyruvate

2,2'-disulfonyl azobenzene

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

(S)-2,3,4,5-tetrahydrodipicolinate

mercuriphenyl acetate

2-keto-D-gluconate

5-phospho-β-D-ribosylamine

2-keto-L-gulonate

xanthine

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

formamide

dimethylmaleate

2-amino-3-carboxymuconate-6-semialdehyde

(S)-dihydroorotate

imidazole acetaldehyde

4-maleyl-acetoacetate

oxalosuccinate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

N⁶-[(Indole-3-yl)acetyl]-L-lysine

2-hydroxy-6-oxohepta-2,4-dienoate

N¹-(5-phospho-β-D-ribosyl)glycinamide

orotidine 5'-phosphate

L-arogenate

(E)-4-coumaroyl-CoA

2-carboxy-L-threo-pentonate

4-acetamidobutanal

5-aminolevulinate

3-ureidoacrylate

4-phosphooxy-L-threonine

2-pyrone-4,6-dicarboxylate

(R)-3-methylitaconate

3-hydroxyanthranilate

prephytoene diphosphate

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2-dehydro-3-deoxy-L-arabinonate

3-methylbutanal

N-acetyl-D-muramate 6-phosphate

dihydromethanophenazine

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(S)-4-amino-5-oxopentanoate

methylamine

α-D-galactosyl-diphosphoundecaprenol

CoB-CoM heterodisulfide

(2R,3S)-2,3-dimethylmalate

protoanemonin

3-methylbutanol

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

phthalate 4,5-cis-dihydrodiol

D-glycero-β-D-manno-heptose 1-phosphate

methanophenazine

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

presqualene diphosphate

N-ethylglycine

coniferyl alcohol

S-methyl-5'-thioadenosine

5-amino-6-(5-phospho-D-ribosylamino)uracil

coenzyme B

3-ureidopropanoate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

picolinate

(indol-3-yl)acetamide

phthalate

L-histidinol phosphate

5-amino-6-(5-phospho-D-ribitylamino)uracil

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

urea

5-methylsalicylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

4-methyl-3-oxoadipate-enol-lactone

(S)-ureidoglycolate

(2Z,4E)-2-amino-6-oxohexa-2,4-dienoate

salicyl alcohol

quinolinate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

sinapaldehyde

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

S-adenosyl 3-(methylsulfanyl)propylamine

cyanate

imidazole acetol-phosphate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

D-erythro-imidazole-glycerol-phosphate

5-amino-6-(D-ribitylamino)uracil

cotinine-glucuronide

(4-hydroxyphenyl)acetate

(S)-4-hydroxy-2-oxohexanoate

sinapyl alcohol

3-methylmuconolactone

(S)-4-hydroxy-2-oxopentanoate

β-nicotinate D-ribonucleotide

4-amino-2-methyl-5-pyrimidinemethanol

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

sinapoyl-CoA

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

α-ribazole

3-(4-hydroxyphenyl)-3-oxo-propionyl-CoA

4-oxalocrotonate

acrylate

glycerone phosphate

1-pyrroline-4-hydroxy-2-carboxylate

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

carbonic acid

D-galactosamine-6-phosphate

glycolate

acrylamide

(1R,2S)-cyclohexa-3,5-diene-1,2-diol

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

CO₂

malonate

anthranilate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

tartronate semialdehyde

2-phosphoglycolate

3-mercaptopyruvate

N-acetyl-D-galactosamine 6-phosphate

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

cinnamyl alcohol

hop-22(29)-ene

thiamine diphosphate

α-D-glucosamine 1-phosphate

histidinol

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

dihydroxyacetone

5-dehydro-4-deoxy-D-glucarate

1,5-anhydro-D-fructose

prephenate

N⁵-carboxyaminoimidazole ribonucleotide

3'-phosphoadenylyl-sulfate

(4Z)-2-oxohept-4-enedioate

3-demethylubiquinol-6

2-oxoadipate

(S)-3-methyl-2-oxopentanoate

4-methyl-3-oxoadipate

N-acetylglutamyl-phosphate

L-thyroxine phenolic β-D-glucuronide

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

ethylamine

histidinal

2,5-dioxopentanoate

squalene

lipid A disaccharide (E. coli)

oxalate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

L-gulono-1,4-lactone

isopropylamine

N-isopropylammelide

2-oxopent-4-enoate

2-iminoacetate

2-phenylethanol

lipid X

1-deoxy-L-glycero-tetrulose 4-phosphate

hydroxyatrazine

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

nicotine-glucuronide

(2S,3S)-2,3-dihydroxy-5-oxohexanedioate

6-aminohexanoate

(3E)-2-oxopent-3-enoate

(R)-1-amino-2-propanol O-2-phosphate

3''-adenylylstreptomycin

3-dehydroquinate

methylsalicylate

ethanolamine

prenyl diphosphate

pseudouridine

2-(α-hydroxyethyl)thiamine diphosphate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

H₂

(2Z,4E)-2-aminomuconate

glutathioselenol

L-canavanine

3-hydroxypropanoate

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

N-(5-phosphoribosyl)-anthranilate

(2E)-2-hydroxypenta-2,4-dienoate

3-deoxy-D-arabino-heptulosonate 7-phosphate

4-guanidinobutanoate

5-carboxymethyl-2-hydroxymuconate

tryptamine

6-aminohexanoate linear dimer

selenodiglutathione

2-methylbutanal

O-acetyl-L-serine

canavaninosuccinate

(1S,4R)-2,4,5-trichloro-2,5-cyclohexadiene-1-diol

γ-L-glutamyl 5-phosphate

(2,3-dihydroxybenzoyl)adenylate

4-guanidinobutyramide

adenosine 5'-phosphosulfate

2-methylbutanol

pimelate

succinate semialdehyde

5-hydroxytryptophol glucuronide

isopentenyl diphosphate

acetyl phosphate

5-enolpyruvoyl-shikimate 3-phosphate

phenylglyoxylate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

2-dehydro-3-deoxy-D-galactonate 6-phosphate

5-hydroxyindole thiazolidine carboxylate

(4S)-4-hydroxy-2-oxoheptanedioate

2-C-methyl-D-erythritol 4-phosphate

N²-succinyl-L-arginine

(R)-2,3-dihydroxy-3-methylpentanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

2-dehydro-3-deoxy-D-galactonate

(R)-4'-phosphopantothenate

urocanate

(1R,2R)-1,2-diphenylethane-1,2-diol

(E)-3-(methoxycarbonyl)pent-2-enedioate

4-carboxy-2-hydroxymuconate-6-semialdehyde

(R)-1-aminopropan-2-ol

S-formylglutathione

5-hydroxyindole acetate

2-oxepin-2(3H)-ylideneacetyl-CoA

3-β-hydroxyandrost-5-en-17-one 3-sulfate

dethiobiotin

(R)-pantothenate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

4-hydroxy-2-nonenal

(1R,2S)-1,2-dihydronaphthalene-1,2-diol

L-arginino-succinate

cis-stilbene oxide

N-acetyl-serotonin glucuronide

cis,cis-muconate

2-maleylacetate

4-imidazolone-5-propanoate

cis-3-phenylcyclohexa-3,5-diene-1,2-diol

ADP-L-glycero-β-D-manno-heptose

5-hydroxyindole acetaldehyde

1,6-anhydro-N-acetyl-β-muramate

naphthalene-1,2-diol

3-oxo-5,6-didehydrosuberyl-CoA

(2E,4Z)-2-hydroxymuconate

4-methyl-2-oxopentanoate

1-phosphatidyl-myo-inositol 2-mannose

ADP-D-glycero-β-D-manno-heptose

N²-succinyl-L-ornithine

adenosine 5'-phosphoselenate

2-(4-hydroxyphenyl)-2-oxoacetate

L-thyroxine acyl β-D-glucuronide

2-hydroxy-5-carboxymethylmuconate semialdehyde

1-phosphatidyl-myo-inositol

5-(methylsulfanyl)-α-D-ribose

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

2-arylpropanoate

3-deoxy-D-manno-octulosonate 8-phosphate

hydroxypyruvate

trans-O-hydroxybenzylidenepyruvate

muconolactone

2,3,5,6-tetracholorophenol

coniferaldehyde

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

7,8-diaminopelargonate

5-methoxyindoleacetaldehyde

(3R,6R)-1,3,4,6-tetrachlorocyclohexa-1,4-diene

isoquinolin-2(1H)-one

chloroacetaldehyde

N-acetyl-L-glutamate 5-semialdehyde

hydrogenobyrinate

streptomycin 3''-phosphate

dehydroascorbate (bicyclic form)

2-aryl-2-methylmalonate

isoquinoline

carbamoyl phosphate

5-methoxytryptamine

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isobutanol

5-dehydro-D-gluconate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

hydrogenobyrinate a,c-diamide

phosphoenolpyruvate

(enterobacterial common antigen)-undecaprenyl diphosphate

lipoamide

N²-succinylglutamate

(R)-4'-phosphopantothenoyl-L-cysteine

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

isochorismate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

(R)-mandelate

4'-phosphopantetheine

dihydrolipoamide

vanillin

8-amino-7-oxononanoate

shikimate 3-phosphate

cotinine

urea-1-carboxylate

selenophosphate

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

3,4-dihydroxyphenylacetaldehyde

2-chloroethanol

lipid IV_A

(S)-2-amino-6-oxohexanoate

(S)-mandelate

preuroporphyrinogen

(Z)-3-ureidoacrylate peracid

pimeloyl-CoA

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S)-2-{[1-(R)-carboxyethyl]amino}pentanoate

cis-coumarinic acid-β-D-glucoside

α-ribazole 5'-phosphate

2,6-dioxo-6-phenylhexa-3-enoate

ε-caprolactone

homogentisate

4-amino-4-deoxychorismate

3-dehydroshikimate

cobalt-precorrin-3

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

cobyrinate

adenosyl-cob(III)yrinate a,c-diamide

cobalt-precorrin-6A

adenosylcobalamin 5'-phosphate

Mg-protoporphyrin

cobalt-precorrin-5B

adenosylcobinamide-GDP

adenosylcobalamin

cobalt-precorrin-2

cob(I)alamin

cobalt-precorrin-6B

cobalt-precorrin-8

cob(I)yrinate a,c-diamide

cobalt-precorrin-5A

cobalt-sirohydrochlorin

cobalt-precorrin-7

cobalt-precorrin-4

cob(I)inamide

adenosyl-cobinamide phosphate

adenosylcobyrate

adenosylcobinamide

protochlorophyllide a

chlorophyllide a

cob(II)yrinate a,c-diamide

3,8-divinyl protochlorophyllide a

3,8-divinyl chlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

protoheme

agmatine

spermine

spermidine

putrescine

cadaverine

N-acetylputrescine

N¹-acetylspermine

N¹-acetylspermidine

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

tyramine

2-phenylethylamine

serotonin

N-acetyl-serotonin

betaine aldehyde hydrate

choline

glycine betaine

betaine aldehyde

choline sulfate

molybdopterin

coenzyme M

coenzyme A

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

L-erythro-7,8-dihydrobiopterin

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

androsterone

3,5,3'-triiodo-L-thyronine

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

phenylacetate

(+)-7-epi-jasmonate

estrone

17β-estradiol

testosterone

L-thyroxine

(R)-2-hydroxyglutarate

2-bromobenzoate

2-chlorobenzoate

2-fluorobenzoate

2-iodobenzoate

2-methoxy-6-(all-trans-octaprenyl)phenol

trans-3-hydroxycotinine-glucuronide

salicylaldehyde

trans-3'-hydroxycotinine

(heptosyl)₂-Kdo₂-lipid A

heptosyl-Kdo₂-lipid A

galactosyl-(glucosyl)₃-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

heptosyl-Kdo₂-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

glucosyl-(heptosyl)₂-Kdo₂-lipid A

glucosyl-(heptosyl)₂-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

α-Kdo-(2→6)-lipid IV_A

galactosyl-glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

betanidin quinone

betanidin

(S)-nicotine

miraxanthin V

leucodopachrome

betalamate

portulacaxanthin II

dopaxanthin

aerobactin

N¹-citryl-N⁶-acetyl-N⁶-hydroxy-L-lysine

streptomycin

isopenicillin N

penicillin G

penicillin K

coumarin

all-trans-retinoate

all-trans-retinyl palmitate

all-trans-retinal

all-trans-retinol

mono-trans,octa-cis-decaprenyl diphosphate

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

crocetin dialdehyde

all-trans-phytoene

15-cis-phytoene

crocetin

(3S)-2,3-epoxy-2,3-dihydrosqualene

oleanolate 3 β-D-glucuronoside

oleanolate

geranial

neral

geranyl diphosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

tributyrin

1,2-dibutyrin

di-trans,octa-cis-undecaprenyl phosphate

geranylgeranyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1,3,6,8-naphthalenetetrol

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-hydroxybenzoate

flaviolin

urate

(2E,4E)-6-(2-aminophenyl)-2-hydroxy-6-oxohexa-2,4-dienoate

benzene

2'-aminobiphenyl-2,3-diol

cyanuric acid

naphthalene

2-nitrobenzoate

benzyl-6-hydroxy-2-cyclohexene-on-oyl

biphenyl

2-hydroxylaminobenzoate

6-hydroxy-2-cyclohexen-one-carboxylate

benzyl alcohol

4-tyrosol

4-coumaryl alcohol

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

phenol

4-nitrobenzyl alcohol

4-methylphenol

(R)-noradrenaline

3-methylcatechol

3-chlorocatechol

5-chloro-3-methylcatechol

4-chlorocatechol

4-methylcatechol

3,5-dichlorocatechol

dopamine

catechol

biphenyl-2,3-diol

3,4-dihydroxyphenylglycol

2,3-dihydroxybenzoate

(R)-adrenaline

protocatechuate

3,4-dihydroxymandelate

L-dopa

3,4-dihydroxyphenylglycolaldehyde

3-sulfocatechol

3,4-dihydroxyphenylacetate

vanillyl mandelate

normetanephrine

metanephrine

3-methoxy-4-hydroxyphenylglycol

3-chlorobenzoate

3-chlorobenzaldehyde

4-chlorosalicylate

2,4-dichlorophenol

5-chlorosalicylate

2,5-dichlorophenol

pentachlorophenol

tetraiodothyroacetate ether glucuronide

tetraiodothyroacetate

triiodothyroacetate ether glucuronide

3,3',5-triiodothyroacetate

3,5,3'-triiodo-L-thyronine phenolic β-D-glucuronide

triiodothyroacetate ester glucuronide

3,5,3'-triiodo-L-thyronine acyl β-D-glucuronide

tetraiodothyroacetate ester glucuronide

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

vanillate

5-chloroprotocatechuate

salicylate

benzoate

4-aminobenzoate

2,3,6-trichlorohydroquinone

2,6-dichlorohydroquinone

2,3,5,6-tetrachlorohydroquinone

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

3-demethylubiquinol-10

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-9

demethylmenaquinol-8

menaquinol-8

ubiquinol-10

ubiquinol-7

ubiquinol-9

ubiquinol-6

ubiquinol-8

atrazine

coumarinate

ferulate

(2R,3S,4S)-leucopelargonidin

(2R,3S,4S)-leucodelphinidin

(2R,3S,4S)-leucocyanidin

(+)-dihydrokaempferol

(+)-dihydromyricetin

(+)-taxifolin

cinnamaldehyde

phenylacetaldehyde

benzaldehyde

4-nitrobenzaldehyde

(4-hydroxyphenyl)acetaldehyde

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

ethylphosphate

mycophenolic acid phenolic glucuronide

mycophenolic acid O-acyl-glucuronide

(+)-5-chloromuconolactone

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

isobutanoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

methylacrylyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

(E)-glutaconyl-CoA

(25R)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

(3S)-hydroxyadipyl-CoA

(25S)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(R)-2-hydroxyglutaryl-CoA

(25R)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(2E,5Z)-tetradecenoyl-CoA

3'-dephospho-CoA

trans-feruloyl-CoA

succinyl-CoA

4-hydroxybenzoyl-CoA

oxalyl-CoA

phenylacetyl-CoA

linoleoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

malonyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

formyl-CoA

(E)-2-methylcrotonoyl-CoA

trans-caffeoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

isovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

(3S)-citryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

acetyl-CoA

2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

α-linolenoyl-CoA

vinylacetyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

2-methylacetoacetyl-CoA

oleoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

butanoyl-CoA

propanoyl-CoA

hexadecanedioyl-CoA

palmitoyl-CoA

stearoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

octanoyl-CoA

decanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

phytenoyl-CoA

(E)-cinnamoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dec-2-enoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

hydrogen cyanide

2-chloromaleylacetate

2-chloro-cis,cis-muconate

3-chloro-cis,cis-muconate

2-chloroacetate

fluoroacetate

3,5-cyclohexadiene-1,2-diol-1-carboxylate

1-octanol

phytol

ethanol

butan-1-ol

propan-1-ol

methanol

glycerol

D-arabinitol

xylitol

D-mannitol

myo-inositol

1-keto-D-chiro-inositol

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

cholest-dien-3-one

cholest-4-en-3-one

3-oxo-23,24-bisnorchol-1,4-dien-22-yl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

5α-androstane-3,17-dione

androst-4-ene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

androsta-1,4-diene-3,17-dione

3-β-hydroxyandrost-5-en-17-one

(glutathion-S-yl)-4-hydroxy-2-nonenal

(S)-1-pyrroline-5-carboxylate

cytosine

thymine

uracil

preQ₁

adenine

guanine

hypoxanthine

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

6,7-dimethyl-8-(1-D-ribityl)lumazine

cyclic pyranopterin phosphate

7,8-dihydroneopterin 3'-phosphate

6-(hydroxymethyl)-7,8-dihydropterin

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin 2',3'-cyclic phosphate

sepiapterin

7,8-dihydromonapterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin

7,8-dihydropteroate

FMN

riboflavin

FAD

FMNH₂

FADH₂

reduced riboflavin

9H carbazole

hydantoin

sirohydrochlorin

precorrin-2

precorrin-3B

precorrin-1

precorrin-5

precorrin-4

precorrin-6A

precorrin-6B

precorrin-8x

precorrin-7

precorrin-3A

guanosine

inosine

adenosine

xanthosine

2'-deoxyinosine

2'-deoxyadenosine

2'-deoxyguanosine

dATP

dGTP

dAMP

dADP

dGDP

IMP

AMP

GMP

XMP

IDP

GDP

ADP

ITP

GTP

ATP

CDP

dUDP

CTP

orotate

UTP

dCTP

5,6-dihydrouracil

UDP

5,6-dihydrothymine

dUMP

dTDP

dTMP

dUTP

dTTP

dCDP

dCMP

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

uridine

cytidine

thymidine

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

dTDP-4-acetamido-4,6-dideoxy-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-α-D-glucuronate

UDP-α-D-galactose

UDP-N-acetyl-α-D-mannosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UMP

CMP

2-hydroxychromene-2-carboxylate

hypoglycin B

carbamate

L-α-amino-ε-keto-pimelate

L-kynurenine

L-2-aminoadipate

N^ω-hydroxy-L-arginine

L-arginine

L-histidine

L-lysine

D-glutamate

L-glutamate

L-saccharopine

L-2-amino-3-oxobutanoate

L-aspartyl-4-phosphate

L-selenomethionine

seleno-L-homocysteine

sarcosine

N⁶,N⁶-dimethyl-L-arginine

cis-4-hydroxy-D-proline

5-hydroxy-L-tryptophan

3-hydroxy-L-kynurenine

trans-4-hydroxy-L-proline

erythro-4-hydroxy-L-glutamate

N⁶-acetyl-N⁶-hydroxy-L-lysine

N⁶-hydroxy-L-lysine

O-acetyl-L-homoserine

N-carbamoyl-L-aspartate

N-carbamoylglycine

N-acetyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-glutamate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

L-threonine 3-O-phosphate

3-phospho-L-serine

L-methionine

L-selenocysteine

glycine

L-proline

L-cysteine

L-alanine

L-isoleucine

L-valine

L-phenylalanine

L-leucine

L-tryptophan

L-threonine

L-asparagine

L-aspartate

L-ornithine

L,L-diaminopimelate

L-glutamine

L-serine

L-tyrosine

L-isoglutamine

L-norvaline

L-cystathionine

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

D-serine

L-citrulline

L-aspartate 4-semialdehyde

O-phospho-L-homoserine

S-sulfo-L-cysteine

L-homoserine

hypoglycin A

L-homocysteine

O-succinyl-L-homoserine

1-aminocyclopropane-1-carboxylate

L-glutamate-5-semialdehyde

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

D-phenylalanine

D-proline

D-aspartate

D-alanine

D-cysteine

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

uroporphyrinogen-III

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

protoporphyrin IX

(Z,Z)-biliverdin-IX α

(Z,Z)-bilirubin-IX α

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

pppGpp

ppGpp

cyclic-AMP

5'-deoxyadenosine

8-oxo-GTP

8-oxo-dGTP

NAD⁺

NADP⁺

NADH

NADPH

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

ADP-α-D-glucose

ADP-D-ribose

cyclic ADP-ribose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

CMP-3-deoxy-β-D-manno-octulosonate

cyclic di-3',5'-guanylate

reduced β-nicotinamide D-ribonucleotide

β-nicotinamide D-ribonucleotide

3-dimethylsulfoniopropionaldehyde

3-(methylsulfanyl)propanal

methionol

S-(hydroxymethyl)glutathione

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

sulfoacetaldehyde

taurine

3-sulfopyruvate

L-cysteate

isethionate

1-butanesulfonate

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

thiocyanate

methanethiol

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

lotaustralin

neolinustatin

acrylonitrile

linamarin

preQ₀

linustatin

(indole-3-yl)acetonitrile

taxiphyllin

2-hydroxy-2-methylpropanenitrile

(2R)-2-hydroxy-2-methylbutanenitrile

geranate

3-(carbamoylamino)-2-methylpropanoate

3-oxoadipate

gentisate

(R)-pantoate

L-carnitine

mycophenolate

D-gluconate

acetate

allantoate

D-mannonate

4-deoxy-L-threo-hex-4-enopyranuronate

propanoate

formate

pyruvate

(S)-lactate

(R)-lactate

butanoate

octanoate

decanoate

heptanoate

(2E,6E)-farnesoate

(2R)-homocitrate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

cis-aconitate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

cis-2-methylaconitate

3-carboxy-cis,cis-muconate

(2S,3S)-2-methylcitrate

trans-aconitate

(2R,3S)-2-methylisocitrate

D-threo-isocitrate

(3E)-2-oxohex-3-enedioate

chorismate

D-glucarate

D-galactarate

fumarate

succinate

(S)-malate

2-oxobutanoate

2-oxoglutarate

glyoxylate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

pristanate

palmitate

stearate

leukotriene-D4

leukotriene-E4

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

oleate

linoleate

α-linolenate

γ-linolenate

(3E,5Z)-tetradecadienoate

phytenate

(15Z)-tetracosenoate

(R)-3-hydroxybutanoate

(R)-glycerate

Reactive Blue 5

hippurate

methane

ubiquinone-8

(R)-NADHX

(S)-NADHX

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

dTDP-4-amino-4,6-dideoxy-α-D-galactose

nitric oxide

monodehydroascorbate radical

hydroxyl radical

superoxide

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

p-coumaroyltyramine

N-feruloyltyramine

sinapoyltyramine

cinnamoyltyramine

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

nicotinamide

(S)-(+)-allantoin

(S)-3-hydroxy-isobutanoate

oxygen

hydrogen sulfide

Hg⁰

3-(all-trans-octaprenyl)benzene-1,2-diol

1-(β-D ribofuranosyl)nicotinamide

β-D-fructofuranose

1,5-anhydro-D-mannitol

α-D-mannopyranose

α-D-glucopyranose

β-D-glucopyranose

α-D-galactopyranose

β-D-galactopyranose

glycolaldehyde

D-glyceraldehyde

D-xylulose

N-acetyl-β-D-glucosamine

N-acetyl-α-D-glucosamine 1-phosphate

maltotriose

maltotetraose

α-maltose

α,α-trehalose

β-D-cellobiose

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (S. aureus)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

a peptidoglycan dimer (meso-diaminopimelate containing)

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

D-erythrose 4-phosphate